RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 TBC1D8O95759 1140 aa19.9■□□□□ 0.78
LINC01116-202ENST00000339037 MKRN3Q13064 507 aaKnown RBP19.9■□□□□ 0.78
LINC01116-202ENST00000339037 ARMC9Q7Z3E5 817 aa19.9■□□□□ 0.78
LINC01116-202ENST00000339037 CD209Q9NNX6 404 aa19.9■□□□□ 0.78
LINC01116-202ENST00000339037 TM4SF4P48230 202 aa19.89■□□□□ 0.77
LINC01116-202ENST00000339037 CENPFP49454 3210 aa19.89■□□□□ 0.77
LINC01116-202ENST00000339037 SREBF2Q12772 1141 aa19.89■□□□□ 0.77
LINC01116-202ENST00000339037 IFIT5Q13325 482 aaKnown RBP19.89■□□□□ 0.77
LINC01116-202ENST00000339037 PRKG1Q13976 671 aa19.89■□□□□ 0.77
LINC01116-202ENST00000339037 ZNF296Q8WUU4 475 aaPredicted RBP19.89■□□□□ 0.77
LINC01116-202ENST00000339037 ZBED3Q96IU2 234 aaPredicted RBP19.89■□□□□ 0.77
LINC01116-202ENST00000339037 COL1A1P02452 1464 aaPredicted RBP19.88■□□□□ 0.77
LINC01116-202ENST00000339037 ZNF316A6NFI3 1004 aaPredicted RBP19.88■□□□□ 0.77
LINC01116-202ENST00000339037 SNAP23O00161 211 aa19.88■□□□□ 0.77
LINC01116-202ENST00000339037 TAF5LO75529 589 aa19.88■□□□□ 0.77
LINC01116-202ENST00000339037 PTPN12Q05209 780 aaKnown RBP19.88■□□□□ 0.77
LINC01116-202ENST00000339037 DLGAP5Q15398 846 aa19.88■□□□□ 0.77
LINC01116-202ENST00000339037 PKN2Q16513 984 aaKnown RBP19.88■□□□□ 0.77
LINC01116-202ENST00000339037 MRS2Q9HD23 443 aa19.88■□□□□ 0.77
LINC01116-202ENST00000339037 CHMP3Q9Y3E7 222 aa19.88■□□□□ 0.77
LINC01116-202ENST00000339037 IRS2Q9Y4H2 1338 aa19.87■□□□□ 0.77
LINC01116-202ENST00000339037 VAMP4O75379 141 aa19.87■□□□□ 0.77
LINC01116-202ENST00000339037 C15orf52Q6ZUT6 534 aaKnown RBP19.87■□□□□ 0.77
LINC01116-202ENST00000339037 CERS5Q8N5B7 392 aa19.87■□□□□ 0.77
LINC01116-202ENST00000339037 HELBQ8NG08 1087 aaPredicted RBP19.87■□□□□ 0.77
LINC01116-202ENST00000339037 DEFB129Q9H1M3 183 aa19.87■□□□□ 0.77
LINC01116-202ENST00000339037 HPS5Q9UPZ3 1129 aa19.87■□□□□ 0.77
LINC01116-202ENST00000339037 FOXO4P98177 505 aa19.86■□□□□ 0.77
LINC01116-202ENST00000339037 EXOSC9Q06265 439 aaKnown RBP19.86■□□□□ 0.77
LINC01116-202ENST00000339037 NOM1Q5C9Z4 860 aaKnown RBP19.86■□□□□ 0.77
LINC01116-202ENST00000339037 LDLRAD1Q5T700 205 aa19.86■□□□□ 0.77
LINC01116-202ENST00000339037 ZNF804AQ7Z570 1209 aa19.86■□□□□ 0.77
LINC01116-202ENST00000339037 WDR63Q8IWG1 891 aa19.86■□□□□ 0.77
LINC01116-202ENST00000339037 ANGEL1Q9UNK9 670 aaKnown RBP19.86■□□□□ 0.77
LINC01116-202ENST00000339037 SALL2Q9Y467 1007 aaPredicted RBP19.86■□□□□ 0.77
LINC01116-202ENST00000339037 MKI67P46013 3256 aaKnown RBP19.86■□□□□ 0.77
LINC01116-202ENST00000339037 F6X3S4 739 aa19.85■□□□□ 0.77
LINC01116-202ENST00000339037 GPR25O00155 361 aa19.85■□□□□ 0.77
LINC01116-202ENST00000339037 BEND3Q5T5X7 828 aa19.85■□□□□ 0.77
LINC01116-202ENST00000339037 MTMR14Q8NCE2 650 aa19.85■□□□□ 0.77
LINC01116-202ENST00000339037 MYO1BO43795 1136 aa19.84■□□□□ 0.77
LINC01116-202ENST00000339037 IL1R1P14778 569 aa19.84■□□□□ 0.77
LINC01116-202ENST00000339037 SPRYD7Q5W111 196 aa19.84■□□□□ 0.77
LINC01116-202ENST00000339037 LMBR1LQ6UX01 489 aa19.84■□□□□ 0.77
LINC01116-202ENST00000339037 PPP2R3BQ9Y5P8 575 aa19.84■□□□□ 0.77
LINC01116-202ENST00000339037 F8W031 263 aaPredicted RBP19.83■□□□□ 0.77
LINC01116-202ENST00000339037 CCDC57Q2TAC2 916 aa19.83■□□□□ 0.77
LINC01116-202ENST00000339037 TAF7LQ5H9L4 462 aa19.83■□□□□ 0.77
LINC01116-202ENST00000339037 CFHR5Q9BXR6 569 aa19.83■□□□□ 0.77
LINC01116-202ENST00000339037 FZD1Q9UP38 647 aa19.83■□□□□ 0.77
LINC01116-202ENST00000339037 GRM8O00222 908 aa19.82■□□□□ 0.76
LINC01116-202ENST00000339037 PPP1R12BO60237 982 aaPredicted RBP19.82■□□□□ 0.76
LINC01116-202ENST00000339037 FKBP1AP62942 108 aaKnown RBP19.82■□□□□ 0.76
LINC01116-202ENST00000339037 CFAP100Q494V2 611 aa19.82■□□□□ 0.76
LINC01116-202ENST00000339037 LDHAL6AQ6ZMR3 332 aa19.82■□□□□ 0.76
LINC01116-202ENST00000339037 PCDHAC2Q9Y5I4 1007 aa19.82■□□□□ 0.76
LINC01116-202ENST00000339037 CLRN2A0PK11 232 aa19.81■□□□□ 0.76
LINC01116-202ENST00000339037 ANP32CO43423 234 aa19.81■□□□□ 0.76
LINC01116-202ENST00000339037 FKTNO75072 461 aa19.81■□□□□ 0.76
LINC01116-202ENST00000339037 ALDH1A1P00352 501 aa19.81■□□□□ 0.76
LINC01116-202ENST00000339037 MAP3K11Q16584 847 aa19.81■□□□□ 0.76
LINC01116-202ENST00000339037 EPHA10Q5JZY3 1008 aa19.81■□□□□ 0.76
LINC01116-202ENST00000339037 SLC10A4Q96EP9 437 aa19.81■□□□□ 0.76
LINC01116-202ENST00000339037 CNNM1Q9NRU3 951 aa19.81■□□□□ 0.76
LINC01116-202ENST00000339037 JAG2Q9Y219 1238 aa19.81■□□□□ 0.76
LINC01116-202ENST00000339037 SSC5DA1L4H1 1573 aa19.81■□□□□ 0.76
LINC01116-202ENST00000339037 MANSC4A6NHS7 340 aaPredicted RBP19.8■□□□□ 0.76
LINC01116-202ENST00000339037 PLIN1O60240 522 aa19.8■□□□□ 0.76
LINC01116-202ENST00000339037 SUPT20HL1Q3ZLR7 823 aa19.8■□□□□ 0.76
LINC01116-202ENST00000339037 FBXO46Q6PJ61 603 aaPredicted RBP19.8■□□□□ 0.76
LINC01116-202ENST00000339037 ZNF594Q96JF6 807 aaPredicted RBP19.8■□□□□ 0.76
LINC01116-202ENST00000339037 R3HDMLQ9H3Y0 253 aa19.8■□□□□ 0.76
LINC01116-202ENST00000339037 VEZTQ9HBM0 779 aa19.8■□□□□ 0.76
LINC01116-202ENST00000339037 C9orf78Q9NZ63 289 aaPredicted RBP19.8■□□□□ 0.76
LINC01116-202ENST00000339037 A0A1B0GUL6 1792 aa19.8■□□□□ 0.76
LINC01116-202ENST00000339037 BRCA2P51587 3418 aa19.79■□□□□ 0.76
LINC01116-202ENST00000339037 ZBTB48P10074 688 aaPredicted RBP19.79■□□□□ 0.76
LINC01116-202ENST00000339037 RBM5P52756 815 aaKnown RBP eCLIP19.79■□□□□ 0.76
LINC01116-202ENST00000339037 INHBEP58166 350 aa19.79■□□□□ 0.76
LINC01116-202ENST00000339037 CLMNQ96JQ2 1002 aa19.79■□□□□ 0.76
LINC01116-202ENST00000339037 PRMT6Q96LA8 375 aaPredicted RBP19.79■□□□□ 0.76
LINC01116-202ENST00000339037 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.79■□□□□ 0.76
LINC01116-202ENST00000339037 UNCXA6NJT0 531 aa19.78■□□□□ 0.76
LINC01116-202ENST00000339037 SLC4A10Q6U841 1118 aa19.77■□□□□ 0.76
LINC01116-202ENST00000339037 IFNL1Q8IU54 200 aa19.77■□□□□ 0.76
LINC01116-202ENST00000339037 WNK4Q96J92 1243 aa19.77■□□□□ 0.76
LINC01116-202ENST00000339037 AOX1Q06278 1338 aa19.76■□□□□ 0.75
LINC01116-202ENST00000339037 FAM205AQ6ZU69 1335 aa19.76■□□□□ 0.75
LINC01116-202ENST00000339037 ECM29Q5VYK3 1845 aa19.76■□□□□ 0.75
LINC01116-202ENST00000339037 ALDH1L1O75891 902 aa19.76■□□□□ 0.75
LINC01116-202ENST00000339037 IREB2P48200 963 aaKnown RBP19.76■□□□□ 0.75
LINC01116-202ENST00000339037 RASA3Q14644 834 aa19.76■□□□□ 0.75
LINC01116-202ENST00000339037 MFSD14BQ5SR56 506 aa19.76■□□□□ 0.75
LINC01116-202ENST00000339037 NBPF12Q5TAG4 269 aaPredicted RBP19.76■□□□□ 0.75
LINC01116-202ENST00000339037 SRCIN1Q9C0H9 1055 aa19.76■□□□□ 0.75
LINC01116-202ENST00000339037 TNFAIP1Q13829 316 aa19.75■□□□□ 0.75
LINC01116-202ENST00000339037 UBE4AQ14139 1066 aa19.75■□□□□ 0.75
LINC01116-202ENST00000339037 PRPF38BQ5VTL8 546 aaKnown RBP19.75■□□□□ 0.75
LINC01116-202ENST00000339037 IGF2BP3O00425 579 aaKnown RBP eCLIP19.74■□□□□ 0.75
LINC01116-202ENST00000339037 HIBADHP31937 336 aaKnown RBP19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms