RNA–Protein interactions for RNA: ENST00000332220.10

YBX1-202, Transcript of Y-box binding protein 1, humanhuman

TSL 5

Gene YBX1, Length 776 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-202ENST00000332220 DCTPP1Q9H773 170 aa25.81■■□□□ 1.72
YBX1-202ENST00000332220 IL1RAPL2Q9NP60 686 aa25.81■■□□□ 1.72
YBX1-202ENST00000332220 ECM29Q5VYK3 1845 aa25.81■■□□□ 1.72
YBX1-202ENST00000332220 RAB11FIP3O75154 756 aa25.8■■□□□ 1.72
YBX1-202ENST00000332220 LMOD1P29536 600 aaPredicted RBP25.8■■□□□ 1.72
YBX1-202ENST00000332220 CERS5Q8N5B7 392 aa25.8■■□□□ 1.72
YBX1-202ENST00000332220 AGBL3Q8NEM8 1001 aa25.8■■□□□ 1.72
YBX1-202ENST00000332220 DPF2Q92785 391 aa25.8■■□□□ 1.72
YBX1-202ENST00000332220 KIF1BPQ96EK5 621 aa25.8■■□□□ 1.72
YBX1-202ENST00000332220 EPHX2P34913 555 aa25.79■■□□□ 1.72
YBX1-202ENST00000332220 MICALL2Q8IY33 904 aa25.79■■□□□ 1.72
YBX1-202ENST00000332220 DBNDD2Q9BQY9 259 aa25.79■■□□□ 1.72
YBX1-202ENST00000332220 TLR7Q9NYK1 1049 aaKnown RBP25.79■■□□□ 1.72
YBX1-202ENST00000332220 CNOT7Q9UIV1 285 aaKnown RBP25.79■■□□□ 1.72
YBX1-202ENST00000332220 CHAF1AQ13111 956 aaPredicted RBP25.78■■□□□ 1.72
YBX1-202ENST00000332220 CCDC8Q9H0W5 538 aaPredicted RBP25.78■■□□□ 1.72
YBX1-202ENST00000332220 DBNLQ9UJU6 430 aaKnown RBP25.78■■□□□ 1.72
YBX1-202ENST00000332220 FRAT2O75474 233 aaPredicted RBP25.77■■□□□ 1.72
YBX1-202ENST00000332220 CENPBP07199 599 aaPredicted RBP25.77■■□□□ 1.72
YBX1-202ENST00000332220 MYO3BQ8WXR4 1341 aa25.77■■□□□ 1.72
YBX1-202ENST00000332220 MYH2Q9UKX2 1941 aa25.76■■□□□ 1.72
YBX1-202ENST00000332220 POTEIP0CG38 1075 aa25.76■■□□□ 1.71
YBX1-202ENST00000332220 POTEJP0CG39 1038 aa25.76■■□□□ 1.71
YBX1-202ENST00000332220 HDAC1Q13547 482 aaPredicted RBP25.76■■□□□ 1.71
YBX1-202ENST00000332220 GORABQ5T7V8 394 aa25.76■■□□□ 1.71
YBX1-202ENST00000332220 SMARCA5O60264 1052 aaPredicted RBP25.75■■□□□ 1.71
YBX1-202ENST00000332220 FKBP1AP62942 108 aaKnown RBP25.75■■□□□ 1.71
YBX1-202ENST00000332220 AACSQ86V21 672 aa25.75■■□□□ 1.71
YBX1-202ENST00000332220 GNL3LQ9NVN8 582 aaKnown RBP25.75■■□□□ 1.71
YBX1-202ENST00000332220 H7C1D1 291 aa25.74■■□□□ 1.71
YBX1-202ENST00000332220 EGFRP00533 1210 aa25.74■■□□□ 1.71
YBX1-202ENST00000332220 RASGRF1Q13972 1273 aa25.74■■□□□ 1.71
YBX1-202ENST00000332220 MFSD14BQ5SR56 506 aa25.74■■□□□ 1.71
YBX1-202ENST00000332220 KIAA0825Q8IV33 1275 aa25.74■■□□□ 1.71
YBX1-202ENST00000332220 TRPM4Q8TD43 1214 aa25.74■■□□□ 1.71
YBX1-202ENST00000332220 LRRCC1Q9C099 1032 aa25.74■■□□□ 1.71
YBX1-202ENST00000332220 BCL11AQ9H165 835 aa25.74■■□□□ 1.71
YBX1-202ENST00000332220 ADARB2Q9NS39 739 aaKnown RBP25.74■■□□□ 1.71
YBX1-202ENST00000332220 SEMA3EO15041 775 aa25.73■■□□□ 1.71
YBX1-202ENST00000332220 ZBTB22O15209 634 aa25.73■■□□□ 1.71
YBX1-202ENST00000332220 USP17L8P0C7I0 530 aa25.73■■□□□ 1.71
YBX1-202ENST00000332220 ARID4AP29374 1257 aaPredicted RBP25.73■■□□□ 1.71
YBX1-202ENST00000332220 GRIK5Q16478 980 aa25.73■■□□□ 1.71
YBX1-202ENST00000332220 EAPPQ56P03 285 aaPredicted RBP25.73■■□□□ 1.71
YBX1-202ENST00000332220 SAMD7Q7Z3H4 446 aa25.73■■□□□ 1.71
YBX1-202ENST00000332220 C16orf71Q8IYS4 520 aaPredicted RBP25.73■■□□□ 1.71
YBX1-202ENST00000332220 CLASRPQ8N2M8 674 aaKnown RBP25.73■■□□□ 1.71
YBX1-202ENST00000332220 ZNF280AP59817 542 aaPredicted RBP25.72■■□□□ 1.71
YBX1-202ENST00000332220 SCARF1Q14162 830 aa25.72■■□□□ 1.71
YBX1-202ENST00000332220 DENND2AQ9ULE3 1009 aa25.72■■□□□ 1.71
YBX1-202ENST00000332220 DOCK2Q92608 1830 aa25.72■■□□□ 1.71
YBX1-202ENST00000332220 F8W031 263 aaPredicted RBP25.71■■□□□ 1.71
YBX1-202ENST00000332220 IGHDP01880 384 aa25.71■■□□□ 1.71
YBX1-202ENST00000332220 HIRAP54198 1017 aaPredicted RBP25.71■■□□□ 1.71
YBX1-202ENST00000332220 TBC1D10BQ4KMP7 808 aaPredicted RBP25.71■■□□□ 1.71
YBX1-202ENST00000332220 USP50Q70EL3 339 aaPredicted RBP25.71■■□□□ 1.71
YBX1-202ENST00000332220 TOMM70O94826 608 aa25.7■■□□□ 1.7
YBX1-202ENST00000332220 MCAMP43121 646 aa25.7■■□□□ 1.7
YBX1-202ENST00000332220 TTC39AQ5SRH9 613 aa25.7■■□□□ 1.7
YBX1-202ENST00000332220 PI16Q6UXB8 463 aa25.7■■□□□ 1.7
YBX1-202ENST00000332220 PNMA8AQ86V59 439 aaPredicted RBP25.7■■□□□ 1.7
YBX1-202ENST00000332220 TBC1D22AQ8WUA7 517 aa25.7■■□□□ 1.7
YBX1-202ENST00000332220 HMG20BQ9P0W2 317 aa25.7■■□□□ 1.7
YBX1-202ENST00000332220 UQCRFS1P1P0C7P4 283 aa25.69■■□□□ 1.7
YBX1-202ENST00000332220 CCDC158Q5M9N0 1113 aa25.69■■□□□ 1.7
YBX1-202ENST00000332220 RBM26Q5T8P6 1007 aaKnown RBP25.69■■□□□ 1.7
YBX1-202ENST00000332220 WDR66Q8TBY9 1149 aa25.69■■□□□ 1.7
YBX1-202ENST00000332220 RWDD1Q9H446 243 aaPredicted RBP25.69■■□□□ 1.7
YBX1-202ENST00000332220 MYH7P12883 1935 aa25.69■■□□□ 1.7
YBX1-202ENST00000332220 TRPM7Q96QT4 1865 aa25.68■■□□□ 1.7
YBX1-202ENST00000332220 PDS5AQ29RF7 1337 aaKnown RBP25.68■■□□□ 1.7
YBX1-202ENST00000332220 IFIT2P09913 472 aaKnown RBP25.68■■□□□ 1.7
YBX1-202ENST00000332220 KIF4BQ2VIQ3 1234 aa25.68■■□□□ 1.7
YBX1-202ENST00000332220 MYOZ2Q9NPC6 264 aa25.68■■□□□ 1.7
YBX1-202ENST00000332220 MAST2Q6P0Q8 1798 aa25.68■■□□□ 1.7
YBX1-202ENST00000332220 LDHDQ86WU2 507 aa25.67■■□□□ 1.7
YBX1-202ENST00000332220 OGFOD1Q8N543 542 aa25.67■■□□□ 1.7
YBX1-202ENST00000332220 RBM46Q8TBY0 533 aaKnown RBP25.67■■□□□ 1.7
YBX1-202ENST00000332220 ZNF512BQ96KM6 892 aaPredicted RBP25.67■■□□□ 1.7
YBX1-202ENST00000332220 TTF2Q9UNY4 1162 aaKnown RBP25.67■■□□□ 1.7
YBX1-202ENST00000332220 SALL1Q9NSC2 1324 aa25.66■■□□□ 1.7
YBX1-202ENST00000332220 SPATA5Q8NB90 893 aa25.66■■□□□ 1.7
YBX1-202ENST00000332220 GCC1Q96CN9 775 aa25.66■■□□□ 1.7
YBX1-202ENST00000332220 SNRKQ9NRH2 765 aa25.66■■□□□ 1.7
YBX1-202ENST00000332220 HDAC9Q9UKV0 1011 aa25.66■■□□□ 1.7
YBX1-202ENST00000332220 CLEC11AQ9Y240 323 aa25.66■■□□□ 1.7
YBX1-202ENST00000332220 SMC5Q8IY18 1101 aa25.65■■□□□ 1.7
YBX1-202ENST00000332220 PCDHAC2Q9Y5I4 1007 aa25.65■■□□□ 1.7
YBX1-202ENST00000332220 ASTN2O75129 1339 aaPredicted RBP25.64■■□□□ 1.7
YBX1-202ENST00000332220 PRDX5P30044 214 aa25.64■■□□□ 1.7
YBX1-202ENST00000332220 CHADLQ6NUI6 762 aa25.64■■□□□ 1.7
YBX1-202ENST00000332220 MMP14P50281 582 aa25.63■■□□□ 1.69
YBX1-202ENST00000332220 SUGT1Q9Y2Z0 365 aa25.63■■□□□ 1.69
YBX1-202ENST00000332220 NBPF9Q3BBW0 867 aa25.62■■□□□ 1.69
YBX1-202ENST00000332220 CFAP100Q494V2 611 aa25.62■■□□□ 1.69
YBX1-202ENST00000332220 ANKRD45Q5TZF3 282 aa25.62■■□□□ 1.69
YBX1-202ENST00000332220 MAP1SQ66K74 1059 aaPredicted RBP25.62■■□□□ 1.69
YBX1-202ENST00000332220 TBC1D9Q6ZT07 1266 aa25.62■■□□□ 1.69
YBX1-202ENST00000332220 SMC1BQ8NDV3 1235 aa25.62■■□□□ 1.69
YBX1-202ENST00000332220 ZBED3Q96IU2 234 aaPredicted RBP25.62■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms