RNA–Protein interactions for RNA: ENST00000331479.3

SMDT1-201, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMDT1, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-201ENST00000331479 CHAF1AQ13111 956 aaPredicted RBP31.85■■■□□ 2.69
SMDT1-201ENST00000331479 B4GALNT3Q6L9W6 998 aa31.85■■■□□ 2.69
SMDT1-201ENST00000331479 GMPSP49915 693 aaPredicted RBP31.84■■■□□ 2.69
SMDT1-201ENST00000331479 RASGRF1Q13972 1273 aa31.84■■■□□ 2.69
SMDT1-201ENST00000331479 MYH13Q9UKX3 1938 aa31.83■■■□□ 2.69
SMDT1-201ENST00000331479 ARID4AP29374 1257 aaPredicted RBP31.83■■■□□ 2.69
SMDT1-201ENST00000331479 SCNN1DP51172 638 aa31.83■■■□□ 2.69
SMDT1-201ENST00000331479 SCARF1Q14162 830 aa31.83■■■□□ 2.69
SMDT1-201ENST00000331479 CCDC158Q5M9N0 1113 aa31.83■■■□□ 2.69
SMDT1-201ENST00000331479 C16orf71Q8IYS4 520 aaPredicted RBP31.83■■■□□ 2.69
SMDT1-201ENST00000331479 CERS5Q8N5B7 392 aa31.83■■■□□ 2.69
SMDT1-201ENST00000331479 L3MBTL3Q96JM7 780 aaPredicted RBP31.83■■■□□ 2.69
SMDT1-201ENST00000331479 WDR90Q96KV7 1748 aa31.83■■■□□ 2.69
SMDT1-201ENST00000331479 POTECB2RU33 542 aa31.82■■■□□ 2.68
SMDT1-201ENST00000331479 TTC39AQ5SRH9 613 aa31.82■■■□□ 2.68
SMDT1-201ENST00000331479 GMLQ99445 158 aa31.81■■■□□ 2.68
SMDT1-201ENST00000331479 SEMA3EO15041 775 aa31.81■■■□□ 2.68
SMDT1-201ENST00000331479 ZBTB22O15209 634 aa31.81■■■□□ 2.68
SMDT1-201ENST00000331479 MCAMP43121 646 aa31.81■■■□□ 2.68
SMDT1-201ENST00000331479 PI16Q6UXB8 463 aa31.81■■■□□ 2.68
SMDT1-201ENST00000331479 RRAGCQ9HB90 399 aa31.81■■■□□ 2.68
SMDT1-201ENST00000331479 NMRK2Q9NPI5 230 aa31.81■■■□□ 2.68
SMDT1-201ENST00000331479 DENND2AQ9ULE3 1009 aa31.81■■■□□ 2.68
SMDT1-201ENST00000331479 SHTN1A0MZ66 631 aa31.8■■■□□ 2.68
SMDT1-201ENST00000331479 UQCRFS1P1P0C7P4 283 aa31.8■■■□□ 2.68
SMDT1-201ENST00000331479 ZNF784Q8NCA9 323 aaPredicted RBP31.8■■■□□ 2.68
SMDT1-201ENST00000331479 HMG20BQ9P0W2 317 aa31.8■■■□□ 2.68
SMDT1-201ENST00000331479 MFSD14BQ5SR56 506 aa31.79■■■□□ 2.68
SMDT1-201ENST00000331479 AGBL3Q8NEM8 1001 aa31.79■■■□□ 2.68
SMDT1-201ENST00000331479 OTUD7AQ8TE49 926 aaPredicted RBP31.79■■■□□ 2.68
SMDT1-201ENST00000331479 RPS12P25398 132 aaKnown RBP31.78■■■□□ 2.68
SMDT1-201ENST00000331479 DPF2Q92785 391 aa31.78■■■□□ 2.68
SMDT1-201ENST00000331479 ZNF512BQ96KM6 892 aaPredicted RBP31.78■■■□□ 2.68
SMDT1-201ENST00000331479 LNPKQ9C0E8 428 aa31.78■■■□□ 2.68
SMDT1-201ENST00000331479 GPRC5DQ9NZD1 345 aa31.78■■■□□ 2.68
SMDT1-201ENST00000331479 NUCB1Q02818 461 aa31.77■■■□□ 2.68
SMDT1-201ENST00000331479 GRIK5Q16478 980 aa31.77■■■□□ 2.68
SMDT1-201ENST00000331479 GPBP1L1Q9HC44 474 aaPredicted RBP31.77■■■□□ 2.68
SMDT1-201ENST00000331479 ZBTB47Q9UFB7 747 aaPredicted RBP31.77■■■□□ 2.68
SMDT1-201ENST00000331479 MYO3BQ8WXR4 1341 aa31.77■■■□□ 2.68
SMDT1-201ENST00000331479 EPS15P42566 896 aa31.77■■■□□ 2.68
SMDT1-201ENST00000331479 FKBP1AP62942 108 aaKnown RBP31.77■■■□□ 2.68
SMDT1-201ENST00000331479 SPATA5Q8NB90 893 aa31.77■■■□□ 2.68
SMDT1-201ENST00000331479 SNRKQ9NRH2 765 aa31.77■■■□□ 2.68
SMDT1-201ENST00000331479 CNOT7Q9UIV1 285 aaKnown RBP31.77■■■□□ 2.68
SMDT1-201ENST00000331479 AKAP11Q9UKA4 1901 aa31.76■■■□□ 2.68
SMDT1-201ENST00000331479 KIAA0825Q8IV33 1275 aa31.76■■■□□ 2.67
SMDT1-201ENST00000331479 WDR66Q8TBY9 1149 aa31.76■■■□□ 2.67
SMDT1-201ENST00000331479 ERICH6BQ5W0A0 696 aa31.75■■■□□ 2.67
SMDT1-201ENST00000331479 CHD1LQ86WJ1 897 aa31.75■■■□□ 2.67
SMDT1-201ENST00000331479 MICALL2Q8IY33 904 aa31.75■■■□□ 2.67
SMDT1-201ENST00000331479 TBC1D22AQ8WUA7 517 aa31.75■■■□□ 2.67
SMDT1-201ENST00000331479 SCN4AP35499 1836 aa31.74■■■□□ 2.67
SMDT1-201ENST00000331479 PDS5AQ29RF7 1337 aaKnown RBP31.74■■■□□ 2.67
SMDT1-201ENST00000331479 HACL1Q9UJ83 578 aa31.74■■■□□ 2.67
SMDT1-201ENST00000331479 F8W031 263 aaPredicted RBP31.73■■■□□ 2.67
SMDT1-201ENST00000331479 LMOD1P29536 600 aaPredicted RBP31.73■■■□□ 2.67
SMDT1-201ENST00000331479 TSHZ3Q63HK5 1081 aa31.73■■■□□ 2.67
SMDT1-201ENST00000331479 CCDC136Q96JN2 1154 aa31.73■■■□□ 2.67
SMDT1-201ENST00000331479 NDUFB9Q9Y6M9 179 aa31.73■■■□□ 2.67
SMDT1-201ENST00000331479 VEGFAP15692 232 aaPredicted RBP31.73■■■□□ 2.67
SMDT1-201ENST00000331479 SALL3Q9BXA9 1300 aa31.72■■■□□ 2.67
SMDT1-201ENST00000331479 IQCA1LA6NCM1 817 aa31.72■■■□□ 2.67
SMDT1-201ENST00000331479 USP17L8P0C7I0 530 aa31.72■■■□□ 2.67
SMDT1-201ENST00000331479 ZAP70P43403 619 aa31.72■■■□□ 2.67
SMDT1-201ENST00000331479 ECHDC1Q9NTX5 307 aa31.72■■■□□ 2.67
SMDT1-201ENST00000331479 SALL1Q9NSC2 1324 aa31.71■■■□□ 2.67
SMDT1-201ENST00000331479 TBC1D9Q6ZT07 1266 aa31.71■■■□□ 2.67
SMDT1-201ENST00000331479 TAF1DQ9H5J8 278 aaPredicted RBP31.71■■■□□ 2.67
SMDT1-201ENST00000331479 ATP5JP18859 108 aa31.7■■■□□ 2.67
SMDT1-201ENST00000331479 EPHX2P34913 555 aa31.7■■■□□ 2.67
SMDT1-201ENST00000331479 H7C1D1 291 aa31.69■■■□□ 2.66
SMDT1-201ENST00000331479 EGFRP00533 1210 aa31.69■■■□□ 2.66
SMDT1-201ENST00000331479 CYP2E1P05181 493 aaPredicted RBP31.69■■■□□ 2.66
SMDT1-201ENST00000331479 PRDX5P30044 214 aa31.69■■■□□ 2.66
SMDT1-201ENST00000331479 ZNF280AP59817 542 aaPredicted RBP31.69■■■□□ 2.66
SMDT1-201ENST00000331479 PPIL4Q8WUA2 492 aaKnown RBP eCLIP31.69■■■□□ 2.66
SMDT1-201ENST00000331479 BOLA2Q9H3K6 86 aa31.69■■■□□ 2.66
SMDT1-201ENST00000331479 ABCF2Q9UG63 623 aa31.69■■■□□ 2.66
SMDT1-201ENST00000331479 SAMD7Q7Z3H4 446 aa31.68■■■□□ 2.66
SMDT1-201ENST00000331479 TTF2Q9UNY4 1162 aaKnown RBP31.68■■■□□ 2.66
SMDT1-201ENST00000331479 MX1P20591 662 aa31.68■■■□□ 2.66
SMDT1-201ENST00000331479 CENPQQ7L2Z9 268 aaPredicted RBP31.68■■■□□ 2.66
SMDT1-201ENST00000331479 GPATCH3Q96I76 525 aa31.68■■■□□ 2.66
SMDT1-201ENST00000331479 ADARB2Q9NS39 739 aaKnown RBP31.68■■■□□ 2.66
SMDT1-201ENST00000331479 PPP4R2Q9NY27 417 aa31.68■■■□□ 2.66
SMDT1-201ENST00000331479 OGFOD1Q8N543 542 aa31.67■■■□□ 2.66
SMDT1-201ENST00000331479 TRPM4Q8TD43 1214 aa31.67■■■□□ 2.66
SMDT1-201ENST00000331479 SUGT1Q9Y2Z0 365 aa31.67■■■□□ 2.66
SMDT1-201ENST00000331479 KIF3CO14782 793 aa31.66■■■□□ 2.66
SMDT1-201ENST00000331479 TBC1D10BQ4KMP7 808 aaPredicted RBP31.66■■■□□ 2.66
SMDT1-201ENST00000331479 RBM26Q5T8P6 1007 aaKnown RBP31.66■■■□□ 2.66
SMDT1-201ENST00000331479 ANTXR1Q9H6X2 564 aa31.66■■■□□ 2.66
SMDT1-201ENST00000331479 LDHBP07195 334 aaKnown RBP31.65■■■□□ 2.66
SMDT1-201ENST00000331479 ZGPATQ8N5A5 531 aaKnown RBP31.65■■■□□ 2.66
SMDT1-201ENST00000331479 MYOZ2Q9NPC6 264 aa31.65■■■□□ 2.66
SMDT1-201ENST00000331479 TTC41PQ6P2S7 1318 aa31.65■■■□□ 2.66
SMDT1-201ENST00000331479 HIRAP54198 1017 aaPredicted RBP31.64■■■□□ 2.66
SMDT1-201ENST00000331479 PI4K2BQ8TCG2 481 aa31.64■■■□□ 2.66
SMDT1-201ENST00000331479 EDC3Q96F86 508 aaKnown RBP31.64■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms