RNA–Protein interactions for RNA: ENST00000331134.10

NPLOC4-201, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPLOC4, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-201ENST00000331134 CALML4Q96GE6 196 aa21.48■■□□□ 1.03
NPLOC4-201ENST00000331134 RIMS2Q9UQ26 1411 aa21.48■■□□□ 1.03
NPLOC4-201ENST00000331134 AKR1B15C9JRZ8 316 aaPredicted RBP21.48■■□□□ 1.03
NPLOC4-201ENST00000331134 KRT86O43790 486 aa21.48■■□□□ 1.03
NPLOC4-201ENST00000331134 FGFR1OPO95684 399 aaKnown RBP21.48■■□□□ 1.03
NPLOC4-201ENST00000331134 TTF1Q15361 905 aaPredicted RBP21.48■■□□□ 1.03
NPLOC4-201ENST00000331134 CCDC122Q5T0U0 273 aa21.48■■□□□ 1.03
NPLOC4-201ENST00000331134 ANO1Q5XXA6 986 aa21.48■■□□□ 1.03
NPLOC4-201ENST00000331134 HDXQ7Z353 690 aa21.48■■□□□ 1.03
NPLOC4-201ENST00000331134 MIGA1Q8NAN2 632 aa21.48■■□□□ 1.03
NPLOC4-201ENST00000331134 EXOC1Q9NV70 894 aa21.48■■□□□ 1.03
NPLOC4-201ENST00000331134 NFE2L3Q9Y4A8 694 aa21.48■■□□□ 1.03
NPLOC4-201ENST00000331134 PSMA7O14818 248 aa21.48■■□□□ 1.03
NPLOC4-201ENST00000331134 PPP1R12BO60237 982 aaPredicted RBP21.48■■□□□ 1.03
NPLOC4-201ENST00000331134 ASIC1P78348 528 aa21.48■■□□□ 1.03
NPLOC4-201ENST00000331134 STAMQ92783 540 aa21.48■■□□□ 1.03
NPLOC4-201ENST00000331134 TMEM266Q2M3C6 531 aa21.47■■□□□ 1.03
NPLOC4-201ENST00000331134 BRAPQ7Z569 592 aa21.47■■□□□ 1.03
NPLOC4-201ENST00000331134 RAB34Q9BZG1 259 aa21.47■■□□□ 1.03
NPLOC4-201ENST00000331134 CABP5Q9NP86 173 aa21.47■■□□□ 1.03
NPLOC4-201ENST00000331134 TPCN1Q9ULQ1 816 aa21.47■■□□□ 1.03
NPLOC4-201ENST00000331134 LUC7L2Q9Y383 392 aaKnown RBP21.47■■□□□ 1.03
NPLOC4-201ENST00000331134 TACC1O75410 805 aa21.47■■□□□ 1.03
NPLOC4-201ENST00000331134 MYL10Q9BUA6 226 aa21.47■■□□□ 1.03
NPLOC4-201ENST00000331134 KRI1Q8N9T8 703 aaKnown RBP21.47■■□□□ 1.03
NPLOC4-201ENST00000331134 PSMB7Q99436 277 aa21.47■■□□□ 1.03
NPLOC4-201ENST00000331134 KCNH3Q9ULD8 1083 aa21.46■■□□□ 1.03
NPLOC4-201ENST00000331134 ABCC4O15439 1325 aa21.46■■□□□ 1.03
NPLOC4-201ENST00000331134 CYP7A1P22680 504 aa21.46■■□□□ 1.03
NPLOC4-201ENST00000331134 GBP2P32456 591 aaPredicted RBP21.46■■□□□ 1.03
NPLOC4-201ENST00000331134 RNASE9P60153 205 aaKnown RBP21.46■■□□□ 1.03
NPLOC4-201ENST00000331134 USP28Q96RU2 1077 aa21.46■■□□□ 1.03
NPLOC4-201ENST00000331134 DESI2Q9BSY9 194 aa21.46■■□□□ 1.03
NPLOC4-201ENST00000331134 SMIM23A6NLE4 172 aa21.46■■□□□ 1.03
NPLOC4-201ENST00000331134 B4E1Z4 1266 aa21.46■■□□□ 1.03
NPLOC4-201ENST00000331134 POLR2DO15514 142 aaKnown RBP21.46■■□□□ 1.03
NPLOC4-201ENST00000331134 PTPN21Q16825 1174 aa21.46■■□□□ 1.03
NPLOC4-201ENST00000331134 USP44Q9H0E7 712 aa21.46■■□□□ 1.03
NPLOC4-201ENST00000331134 TLDC2A0PJX2 215 aa21.45■■□□□ 1.03
NPLOC4-201ENST00000331134 NUTM2BA6NNL0 878 aaPredicted RBP21.45■■□□□ 1.03
NPLOC4-201ENST00000331134 NUTM2EB1AL46 878 aaPredicted RBP21.45■■□□□ 1.03
NPLOC4-201ENST00000331134 ERCC3P19447 782 aa21.45■■□□□ 1.03
NPLOC4-201ENST00000331134 ADKP55263 362 aaKnown RBP21.45■■□□□ 1.03
NPLOC4-201ENST00000331134 ADCK5Q3MIX3 580 aa21.45■■□□□ 1.03
NPLOC4-201ENST00000331134 IFIT1BQ5T764 474 aaKnown RBP21.45■■□□□ 1.03
NPLOC4-201ENST00000331134 PHKBQ93100 1093 aa21.45■■□□□ 1.03
NPLOC4-201ENST00000331134 VWA3AA6NCI4 1184 aa21.45■■□□□ 1.02
NPLOC4-201ENST00000331134 SMC1AQ14683 1233 aaKnown RBP21.45■■□□□ 1.02
NPLOC4-201ENST00000331134 MCM7P33993 719 aa21.45■■□□□ 1.02
NPLOC4-201ENST00000331134 IRX3P78415 501 aaPredicted RBP21.45■■□□□ 1.02
NPLOC4-201ENST00000331134 SF3A3Q12874 501 aaKnown RBP eCLIP21.45■■□□□ 1.024e-8■■■■□ 19.5
NPLOC4-201ENST00000331134 LGR6Q9HBX8 967 aa21.45■■□□□ 1.02
NPLOC4-201ENST00000331134 ELP1O95163 1332 aa21.45■■□□□ 1.02
NPLOC4-201ENST00000331134 KAT14Q9H8E8 782 aa21.45■■□□□ 1.02
NPLOC4-201ENST00000331134 PTPRTO14522 1441 aa21.44■■□□□ 1.02
NPLOC4-201ENST00000331134 SIRT2Q8IXJ6 389 aa21.44■■□□□ 1.02
NPLOC4-201ENST00000331134 NPATQ14207 1427 aa21.44■■□□□ 1.02
NPLOC4-201ENST00000331134 CFAP43Q8NDM7 1665 aa21.44■■□□□ 1.02
NPLOC4-201ENST00000331134 AMPD3Q01432 767 aa21.44■■□□□ 1.02
NPLOC4-201ENST00000331134 ZNF174Q15697 407 aa21.43■■□□□ 1.02
NPLOC4-201ENST00000331134 ESR2Q92731 530 aa21.43■■□□□ 1.02
NPLOC4-201ENST00000331134 SEC62Q99442 399 aaKnown RBP21.43■■□□□ 1.02
NPLOC4-201ENST00000331134 RMND1Q9NWS8 449 aa21.43■■□□□ 1.02
NPLOC4-201ENST00000331134 KIF5BP33176 963 aa21.43■■□□□ 1.02
NPLOC4-201ENST00000331134 FAM114A1Q8IWE2 563 aa21.43■■□□□ 1.02
NPLOC4-201ENST00000331134 ANKIB1Q9P2G1 1089 aa21.43■■□□□ 1.02
NPLOC4-201ENST00000331134 AKAP4Q5JQC9 854 aa21.43■■□□□ 1.02
NPLOC4-201ENST00000331134 FAM76AQ8TAV0 307 aa21.43■■□□□ 1.02
NPLOC4-201ENST00000331134 CACTINQ8WUQ7 758 aaKnown RBP21.43■■□□□ 1.02
NPLOC4-201ENST00000331134 INCENPQ9NQS7 918 aa21.43■■□□□ 1.02
NPLOC4-201ENST00000331134 HINFPQ9BQA5 517 aa21.42■■□□□ 1.02
NPLOC4-201ENST00000331134 A0A0D9SFI3 127 aa21.42■■□□□ 1.02
NPLOC4-201ENST00000331134 ZNF594Q96JF6 807 aaPredicted RBP21.42■■□□□ 1.02
NPLOC4-201ENST00000331134 PUS7Q96PZ0 661 aaKnown RBP21.42■■□□□ 1.02
NPLOC4-201ENST00000331134 OPA1O60313 960 aa21.42■■□□□ 1.02
NPLOC4-201ENST00000331134 KRT83P78385 493 aa21.42■■□□□ 1.02
NPLOC4-201ENST00000331134 ZSCAN26Q16670 478 aa21.42■■□□□ 1.02
NPLOC4-201ENST00000331134 HEATR3Q7Z4Q2 680 aa21.42■■□□□ 1.02
NPLOC4-201ENST00000331134 KRT23Q9C075 422 aa21.42■■□□□ 1.02
NPLOC4-201ENST00000331134 PLEKHA4Q9H4M7 779 aa21.42■■□□□ 1.02
NPLOC4-201ENST00000331134 INSRP06213 1382 aa21.41■■□□□ 1.02
NPLOC4-201ENST00000331134 SUCLG2Q96I99 432 aa21.41■■□□□ 1.02
NPLOC4-201ENST00000331134 RAPGEF6Q8TEU7 1601 aa21.41■■□□□ 1.02
NPLOC4-201ENST00000331134 NF2P35240 595 aa21.41■■□□□ 1.02
NPLOC4-201ENST00000331134 CNGA4Q8IV77 575 aa21.41■■□□□ 1.02
NPLOC4-201ENST00000331134 LRRC8AQ8IWT6 810 aa21.41■■□□□ 1.02
NPLOC4-201ENST00000331134 KIAA1524Q8TCG1 905 aa21.41■■□□□ 1.02
NPLOC4-201ENST00000331134 KRT28Q7Z3Y7 464 aa21.41■■□□□ 1.02
NPLOC4-201ENST00000331134 SCLT1Q96NL6 688 aa21.41■■□□□ 1.02
NPLOC4-201ENST00000331134 FLT4P35916 1363 aa21.41■■□□□ 1.02
NPLOC4-201ENST00000331134 ARHGAP6O43182 974 aa21.41■■□□□ 1.02
NPLOC4-201ENST00000331134 HPDP32754 393 aaPredicted RBP21.41■■□□□ 1.02
NPLOC4-201ENST00000331134 ZNF827Q17R98 1081 aa21.4■■□□□ 1.02
NPLOC4-201ENST00000331134 TNNI3KQ59H18 835 aa21.4■■□□□ 1.02
NPLOC4-201ENST00000331134 FPGT-TNNI3KV9GXZ4 949 aa21.4■■□□□ 1.02
NPLOC4-201ENST00000331134 GCOM1H8Y6P7 765 aaPredicted RBP21.4■■□□□ 1.02
NPLOC4-201ENST00000331134 MYZAPP0CAP1 466 aa21.4■■□□□ 1.02
NPLOC4-201ENST00000331134 VAV2P52735 878 aa21.4■■□□□ 1.02
NPLOC4-201ENST00000331134 ZRSR2Q15696 482 aaKnown RBP21.4■■□□□ 1.02
NPLOC4-201ENST00000331134 KLHL34Q8N239 644 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 171.3 ms