RNA–Protein interactions for RNA: ENST00000329970.7

GTF3C6-201, Transcript of general transcription factor IIIC subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C6, Length 952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C6-201ENST00000329970 REM2Q8IYK8 340 aaPredicted RBP17.1■□□□□ 0.33
GTF3C6-201ENST00000329970 ANKRD44Q8N8A2 993 aa17.1■□□□□ 0.33
GTF3C6-201ENST00000329970 CDCA7LQ96GN5 454 aa17.1■□□□□ 0.33
GTF3C6-201ENST00000329970 BICC1Q9H694 974 aaKnown RBP17.1■□□□□ 0.33
GTF3C6-201ENST00000329970 RIPOR2Q9Y4F9 1068 aa17.1■□□□□ 0.33
GTF3C6-201ENST00000329970 FAM205AQ6ZU69 1335 aa17.1■□□□□ 0.33
GTF3C6-201ENST00000329970 MYH13Q9UKX3 1938 aa17.09■□□□□ 0.33
GTF3C6-201ENST00000329970 SASH1O94885 1247 aa17.09■□□□□ 0.33
GTF3C6-201ENST00000329970 CERS5Q8N5B7 392 aa17.09■□□□□ 0.33
GTF3C6-201ENST00000329970 USP44Q9H0E7 712 aa17.09■□□□□ 0.33
GTF3C6-201ENST00000329970 SAGE1Q9NXZ1 904 aa17.09■□□□□ 0.33
GTF3C6-201ENST00000329970 TDRD7Q8NHU6 1098 aaKnown RBP17.08■□□□□ 0.32
GTF3C6-201ENST00000329970 ZIC5Q96T25 663 aa17.08■□□□□ 0.32
GTF3C6-201ENST00000329970 NF2P35240 595 aa17.07■□□□□ 0.32
GTF3C6-201ENST00000329970 RASAL3Q86YV0 1011 aa17.07■□□□□ 0.32
GTF3C6-201ENST00000329970 PUS3Q9BZE2 481 aaKnown RBP17.07■□□□□ 0.32
GTF3C6-201ENST00000329970 SMC4Q9NTJ3 1288 aa17.07■□□□□ 0.32
GTF3C6-201ENST00000329970 KIF16BQ96L93 1317 aa17.06■□□□□ 0.32
GTF3C6-201ENST00000329970 PLIN1O60240 522 aa17.06■□□□□ 0.32
GTF3C6-201ENST00000329970 HIBADHP31937 336 aaKnown RBP17.06■□□□□ 0.32
GTF3C6-201ENST00000329970 KIF23Q02241 960 aaPredicted RBP17.06■□□□□ 0.32
GTF3C6-201ENST00000329970 DLGAP5Q15398 846 aa17.06■□□□□ 0.32
GTF3C6-201ENST00000329970 VGLL2Q8N8G2 317 aa17.06■□□□□ 0.32
GTF3C6-201ENST00000329970 FAM84BQ96KN1 310 aaPredicted RBP17.06■□□□□ 0.32
GTF3C6-201ENST00000329970 PPP2R3BQ9Y5P8 575 aa17.06■□□□□ 0.32
GTF3C6-201ENST00000329970 SPDYE2BA6NHP3 402 aa17.04■□□□□ 0.32
GTF3C6-201ENST00000329970 CAPN15O75808 1086 aa17.04■□□□□ 0.32
GTF3C6-201ENST00000329970 PDE8BO95263 885 aa17.04■□□□□ 0.32
GTF3C6-201ENST00000329970 SPDYE6P0CI01 402 aa17.04■□□□□ 0.32
GTF3C6-201ENST00000329970 FBXO33Q7Z6M2 555 aa17.04■□□□□ 0.32
GTF3C6-201ENST00000329970 MYO1BO43795 1136 aa17.03■□□□□ 0.32
GTF3C6-201ENST00000329970 GYG1P46976 350 aa17.03■□□□□ 0.32
GTF3C6-201ENST00000329970 MAP3K11Q16584 847 aa17.03■□□□□ 0.32
GTF3C6-201ENST00000329970 CFAP100Q494V2 611 aa17.03■□□□□ 0.32
GTF3C6-201ENST00000329970 LRRC24Q50LG9 513 aa17.03■□□□□ 0.32
GTF3C6-201ENST00000329970 ARMC9Q7Z3E5 817 aa17.03■□□□□ 0.32
GTF3C6-201ENST00000329970 CSRNP1Q96S65 589 aa17.03■□□□□ 0.32
GTF3C6-201ENST00000329970 API5Q9BZZ5 524 aaKnown RBP17.03■□□□□ 0.32
GTF3C6-201ENST00000329970 TSKSQ9UJT2 592 aa17.03■□□□□ 0.32
GTF3C6-201ENST00000329970 FBXO3Q9UK99 471 aa17.03■□□□□ 0.32
GTF3C6-201ENST00000329970 SCAF8Q9UPN6 1271 aaKnown RBP17.03■□□□□ 0.32
GTF3C6-201ENST00000329970 UNCXA6NJT0 531 aa17.02■□□□□ 0.32
GTF3C6-201ENST00000329970 RFX5P48382 616 aaPredicted RBP17.02■□□□□ 0.32
GTF3C6-201ENST00000329970 METTL24Q5JXM2 366 aa17.02■□□□□ 0.32
GTF3C6-201ENST00000329970 MFSD14BQ5SR56 506 aa17.02■□□□□ 0.32
GTF3C6-201ENST00000329970 PRAMEF18Q5VWM3 479 aa17.02■□□□□ 0.32
GTF3C6-201ENST00000329970 ARHGAP45Q92619 1136 aa17.02■□□□□ 0.32
GTF3C6-201ENST00000329970 ABHD8Q96I13 439 aa17.02■□□□□ 0.32
GTF3C6-201ENST00000329970 DEFB129Q9H1M3 183 aa17.02■□□□□ 0.32
GTF3C6-201ENST00000329970 SERPINA10Q9UK55 444 aa17.02■□□□□ 0.32
GTF3C6-201ENST00000329970 HDAC5Q9UQL6 1122 aa17.02■□□□□ 0.32
GTF3C6-201ENST00000329970 UBE2Q2LH0YL09 131 aa17.01■□□□□ 0.31
GTF3C6-201ENST00000329970 FGFR2P21802 821 aa17.01■□□□□ 0.31
GTF3C6-201ENST00000329970 CAVIN4Q5BKX8 364 aa17.01■□□□□ 0.31
GTF3C6-201ENST00000329970 LDLRAD1Q5T700 205 aa17.01■□□□□ 0.31
GTF3C6-201ENST00000329970 MOB2Q70IA6 237 aa17.01■□□□□ 0.31
GTF3C6-201ENST00000329970 TBC1D22AQ8WUA7 517 aa17.01■□□□□ 0.31
GTF3C6-201ENST00000329970 PRMT6Q96LA8 375 aaPredicted RBP17.01■□□□□ 0.31
GTF3C6-201ENST00000329970 RNF186Q9NXI6 227 aa17.01■□□□□ 0.31
GTF3C6-201ENST00000329970 SSC5DA1L4H1 1573 aa17.01■□□□□ 0.31
GTF3C6-201ENST00000329970 F8W031 263 aaPredicted RBP17■□□□□ 0.31
GTF3C6-201ENST00000329970 EYA2O00167 538 aa17■□□□□ 0.31
GTF3C6-201ENST00000329970 RARSP54136 660 aaKnown RBP17■□□□□ 0.31
GTF3C6-201ENST00000329970 PTPN12Q05209 780 aaKnown RBP17■□□□□ 0.31
GTF3C6-201ENST00000329970 PUM3Q15397 648 aaKnown RBP17■□□□□ 0.31
GTF3C6-201ENST00000329970 NOB1Q9ULX3 412 aaKnown RBP17■□□□□ 0.31
GTF3C6-201ENST00000329970 OTOFQ9HC10 1997 aa17■□□□□ 0.31
GTF3C6-201ENST00000329970 UBTFL1P0CB47 393 aaPredicted RBP16.99■□□□□ 0.31
GTF3C6-201ENST00000329970 TM4SF4P48230 202 aa16.99■□□□□ 0.31
GTF3C6-201ENST00000329970 HDLBPQ00341 1268 aaKnown RBP16.99■□□□□ 0.31
GTF3C6-201ENST00000329970 TTLL12Q14166 644 aaPredicted RBP16.99■□□□□ 0.31
GTF3C6-201ENST00000329970 VPS37DQ86XT2 251 aa16.99■□□□□ 0.31
GTF3C6-201ENST00000329970 KLHDC4Q8TBB5 520 aa16.99■□□□□ 0.31
GTF3C6-201ENST00000329970 MRIQ9BWK5 157 aa16.99■□□□□ 0.31
GTF3C6-201ENST00000329970 TTF2Q9UNY4 1162 aaKnown RBP16.99■□□□□ 0.31
GTF3C6-201ENST00000329970 JAG2Q9Y219 1238 aa16.99■□□□□ 0.31
GTF3C6-201ENST00000329970 SUGT1Q9Y2Z0 365 aa16.99■□□□□ 0.31
GTF3C6-201ENST00000329970 PCDHAC2Q9Y5I4 1007 aa16.99■□□□□ 0.31
GTF3C6-201ENST00000329970 ZBTB22O15209 634 aa16.98■□□□□ 0.31
GTF3C6-201ENST00000329970 CIAO1O76071 339 aa16.98■□□□□ 0.31
GTF3C6-201ENST00000329970 IFIT1P09914 478 aaKnown RBP16.98■□□□□ 0.31
GTF3C6-201ENST00000329970 TNFAIP1Q13829 316 aa16.98■□□□□ 0.31
GTF3C6-201ENST00000329970 SUPT20HL1Q3ZLR7 823 aa16.98■□□□□ 0.31
GTF3C6-201ENST00000329970 SPDYE2Q495Y8 402 aa16.98■□□□□ 0.31
GTF3C6-201ENST00000329970 PPP1R12BO60237 982 aaPredicted RBP16.97■□□□□ 0.31
GTF3C6-201ENST00000329970 TRPA1O75762 1119 aa16.97■□□□□ 0.31
GTF3C6-201ENST00000329970 NOM1Q5C9Z4 860 aaKnown RBP16.97■□□□□ 0.31
GTF3C6-201ENST00000329970 INTS3Q68E01 1043 aaKnown RBP16.97■□□□□ 0.31
GTF3C6-201ENST00000329970 ATG9AQ7Z3C6 839 aa16.97■□□□□ 0.31
GTF3C6-201ENST00000329970 LPIN2Q92539 896 aa16.97■□□□□ 0.31
GTF3C6-201ENST00000329970 CFHR5Q9BXR6 569 aa16.97■□□□□ 0.31
GTF3C6-201ENST00000329970 ANGEL1Q9UNK9 670 aaKnown RBP16.97■□□□□ 0.31
GTF3C6-201ENST00000329970 CLRN2A0PK11 232 aa16.96■□□□□ 0.31
GTF3C6-201ENST00000329970 CRKP46108 304 aa16.96■□□□□ 0.31
GTF3C6-201ENST00000329970 RBM5P52756 815 aaKnown RBP eCLIP16.96■□□□□ 0.31
GTF3C6-201ENST00000329970 SREBF2Q12772 1141 aa16.96■□□□□ 0.31
GTF3C6-201ENST00000329970 DZIP1LQ8IYY4 767 aaKnown RBP16.96■□□□□ 0.31
GTF3C6-201ENST00000329970 MCOLN1Q9GZU1 580 aa16.96■□□□□ 0.31
GTF3C6-201ENST00000329970 ZNF70Q9UC06 446 aaPredicted RBP16.96■□□□□ 0.31
GTF3C6-201ENST00000329970 MAST3O60307 1309 aa16.96■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms