RNA–Protein interactions for RNA: ENST00000324685.10

RNF40-201, Transcript of ring finger protein 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF40, Length 5,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-201ENST00000324685 AKAP4Q5JQC9 854 aa23.75■■□□□ 1.39
RNF40-201ENST00000324685 HS2ST1Q7LGA3 356 aa23.75■■□□□ 1.39
RNF40-201ENST00000324685 CNGA4Q8IV77 575 aa23.75■■□□□ 1.39
RNF40-201ENST00000324685 PUS7Q96PZ0 661 aaKnown RBP23.75■■□□□ 1.39
RNF40-201ENST00000324685 AK2P54819 239 aa23.75■■□□□ 1.39
RNF40-201ENST00000324685 JAKMIP2Q96AA8 810 aa23.75■■□□□ 1.39
RNF40-201ENST00000324685 NAP1L4Q99733 375 aaKnown RBP23.75■■□□□ 1.39
RNF40-201ENST00000324685 SPDYE3A6NKU9 549 aa23.75■■□□□ 1.39
RNF40-201ENST00000324685 NDC80O14777 642 aa23.75■■□□□ 1.39
RNF40-201ENST00000324685 CREB3L3Q68CJ9 461 aa23.75■■□□□ 1.39
RNF40-201ENST00000324685 CCDC94Q9BW85 323 aaPredicted RBP23.75■■□□□ 1.39
RNF40-201ENST00000324685 ARL1P40616 181 aaPredicted RBP23.74■■□□□ 1.39
RNF40-201ENST00000324685 RUFY3Q7L099 469 aa23.74■■□□□ 1.39
RNF40-201ENST00000324685 RBM28Q9NW13 759 aaKnown RBP23.74■■□□□ 1.39
RNF40-201ENST00000324685 KARSQ15046 597 aaKnown RBP23.74■■□□□ 1.39
RNF40-201ENST00000324685 IFNKQ9P0W0 207 aa23.74■■□□□ 1.39
RNF40-201ENST00000324685 LUC7L2Q9Y383 392 aaKnown RBP23.74■■□□□ 1.39
RNF40-201ENST00000324685 PTPDC1A2A3K4 754 aa23.74■■□□□ 1.39
RNF40-201ENST00000324685 GNA11P29992 359 aa23.74■■□□□ 1.39
RNF40-201ENST00000324685 PPP1R2P41236 205 aa23.74■■□□□ 1.39
RNF40-201ENST00000324685 CPLX4Q7Z7G2 160 aa23.74■■□□□ 1.39
RNF40-201ENST00000324685 SAMD15Q9P1V8 674 aa23.74■■□□□ 1.39
RNF40-201ENST00000324685 MAP7D1Q3KQU3 841 aa23.73■■□□□ 1.39
RNF40-201ENST00000324685 MTUS1Q9ULD2 1270 aa23.73■■□□□ 1.39
RNF40-201ENST00000324685 B4DLN1 442 aa23.73■■□□□ 1.39
RNF40-201ENST00000324685 PLCG2P16885 1265 aa23.73■■□□□ 1.39
RNF40-201ENST00000324685 ALDH3A1P30838 453 aa23.73■■□□□ 1.39
RNF40-201ENST00000324685 MRPL12P52815 198 aaKnown RBP23.73■■□□□ 1.39
RNF40-201ENST00000324685 PLCB3Q01970 1234 aa23.73■■□□□ 1.39
RNF40-201ENST00000324685 FBXO31Q5XUX0 539 aaPredicted RBP23.73■■□□□ 1.39
RNF40-201ENST00000324685 C8orf34Q49A92 452 aa23.73■■□□□ 1.39
RNF40-201ENST00000324685 SETDB2Q96T68 719 aa23.73■■□□□ 1.39
RNF40-201ENST00000324685 LZTFL1Q9NQ48 299 aa23.73■■□□□ 1.39
RNF40-201ENST00000324685 HDXQ7Z353 690 aa23.73■■□□□ 1.39
RNF40-201ENST00000324685 ATP6V0A2Q9Y487 856 aa23.73■■□□□ 1.39
RNF40-201ENST00000324685 SETDB1Q15047 1291 aa23.73■■□□□ 1.39
RNF40-201ENST00000324685 ZCRB1Q8TBF4 217 aaKnown RBP23.73■■□□□ 1.39
RNF40-201ENST00000324685 SYT10Q6XYQ8 523 aa23.72■■□□□ 1.39
RNF40-201ENST00000324685 DHX32Q7L7V1 743 aaKnown RBP23.72■■□□□ 1.39
RNF40-201ENST00000324685 IQUBQ8NA54 791 aa23.72■■□□□ 1.39
RNF40-201ENST00000324685 NLRP3Q96P20 1036 aa23.72■■□□□ 1.39
RNF40-201ENST00000324685 CEP83Q9Y592 693 aa23.72■■□□□ 1.39
RNF40-201ENST00000324685 APOBRQ0VD83 1088 aa23.72■■□□□ 1.39
RNF40-201ENST00000324685 DTHD1Q6ZMT9 781 aa23.72■■□□□ 1.39
RNF40-201ENST00000324685 FAM76AQ8TAV0 307 aa23.72■■□□□ 1.39
RNF40-201ENST00000324685 ABCA10Q8WWZ4 1543 aa23.72■■□□□ 1.39
RNF40-201ENST00000324685 PPP1R7Q15435 360 aa23.72■■□□□ 1.39
RNF40-201ENST00000324685 APBB1IPQ7Z5R6 666 aaPredicted RBP23.71■■□□□ 1.39
RNF40-201ENST00000324685 IFT81Q8WYA0 676 aa23.71■■□□□ 1.39
RNF40-201ENST00000324685 PICALMQ13492 652 aa23.71■■□□□ 1.39
RNF40-201ENST00000324685 PAXIP1Q6ZW49 1069 aaPredicted RBP23.71■■□□□ 1.39
RNF40-201ENST00000324685 ELP1O95163 1332 aa23.71■■□□□ 1.39
RNF40-201ENST00000324685 CCDC160A6NGH7 325 aa23.71■■□□□ 1.39
RNF40-201ENST00000324685 CCDC14Q49A88 953 aa23.71■■□□□ 1.39
RNF40-201ENST00000324685 DCTPP1Q9H773 170 aa23.71■■□□□ 1.39
RNF40-201ENST00000324685 MCM7P33993 719 aa23.7■■□□□ 1.39
RNF40-201ENST00000324685 STX17P56962 302 aa23.7■■□□□ 1.39
RNF40-201ENST00000324685 CALCOCO2Q13137 446 aa23.7■■□□□ 1.39
RNF40-201ENST00000324685 NCBP1Q09161 790 aaKnown RBP23.7■■□□□ 1.38
RNF40-201ENST00000324685 SEL1L2Q5TEA6 688 aa23.7■■□□□ 1.38
RNF40-201ENST00000324685 TCHPQ9BT92 498 aa23.7■■□□□ 1.38
RNF40-201ENST00000324685 TXNDC16Q9P2K2 825 aa23.7■■□□□ 1.38
RNF40-201ENST00000324685 TTC31Q49AM3 519 aaPredicted RBP23.7■■□□□ 1.38
RNF40-201ENST00000324685 NYXQ9GZU5 481 aa23.7■■□□□ 1.38
RNF40-201ENST00000324685 RHOXF2BP0C7M4 288 aa23.7■■□□□ 1.38
RNF40-201ENST00000324685 RPL13P26373 211 aaKnown RBP23.7■■□□□ 1.38
RNF40-201ENST00000324685 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.7■■□□□ 1.38
RNF40-201ENST00000324685 C8orf58Q8NAV2 365 aa23.7■■□□□ 1.38
RNF40-201ENST00000324685 RHOXF2Q9BQY4 288 aa23.7■■□□□ 1.38
RNF40-201ENST00000324685 OGFRQ9NZT2 677 aa23.7■■□□□ 1.38
RNF40-201ENST00000324685 AKR1B15C9JRZ8 316 aaPredicted RBP23.7■■□□□ 1.38
RNF40-201ENST00000324685 TNNI2P48788 182 aa23.7■■□□□ 1.38
RNF40-201ENST00000324685 CFAP58Q5T655 872 aa23.69■■□□□ 1.38
RNF40-201ENST00000324685 ATP5DP30049 168 aa23.69■■□□□ 1.38
RNF40-201ENST00000324685 MYL5Q02045 173 aa23.69■■□□□ 1.38
RNF40-201ENST00000324685 TRIM14Q14142 442 aa23.69■■□□□ 1.38
RNF40-201ENST00000324685 LINS1Q8NG48 757 aa23.69■■□□□ 1.38
RNF40-201ENST00000324685 CEP85Q6P2H3 762 aa23.69■■□□□ 1.38
RNF40-201ENST00000324685 CEP128Q6ZU80 1094 aa23.69■■□□□ 1.38
RNF40-201ENST00000324685 C16orf71Q8IYS4 520 aaPredicted RBP23.69■■□□□ 1.38
RNF40-201ENST00000324685 CCDC114Q96M63 670 aa23.69■■□□□ 1.38
RNF40-201ENST00000324685 NOL3O60936 208 aaKnown RBP23.69■■□□□ 1.38
RNF40-201ENST00000324685 PLB1Q6P1J6 1458 aa23.69■■□□□ 1.38
RNF40-201ENST00000324685 TUBB2AQ13885 445 aa23.68■■□□□ 1.38
RNF40-201ENST00000324685 TUBB2BQ9BVA1 445 aa23.68■■□□□ 1.38
RNF40-201ENST00000324685 PSMC4P43686 418 aa23.68■■□□□ 1.38
RNF40-201ENST00000324685 CCDC26Q8TAB7 109 aa23.68■■□□□ 1.38
RNF40-201ENST00000324685 BAG1Q99933 345 aaPredicted RBP23.68■■□□□ 1.38
RNF40-201ENST00000324685 STIM2Q9P246 746 aa23.68■■□□□ 1.38
RNF40-201ENST00000324685 IQSEC3Q9UPP2 1182 aaPredicted RBP23.68■■□□□ 1.38
RNF40-201ENST00000324685 KCNK9Q9NPC2 374 aa23.68■■□□□ 1.38
RNF40-201ENST00000324685 ZEB2O60315 1214 aa23.68■■□□□ 1.38
RNF40-201ENST00000324685 ATP6V1AP38606 617 aa23.67■■□□□ 1.38
RNF40-201ENST00000324685 NAP1L3Q99457 506 aaPredicted RBP23.67■■□□□ 1.38
RNF40-201ENST00000324685 SBNO2Q9Y2G9 1366 aa23.67■■□□□ 1.38
RNF40-201ENST00000324685 TRAF3IP1Q8TDR0 691 aaPredicted RBP23.67■■□□□ 1.38
RNF40-201ENST00000324685 CEP57Q86XR8 500 aa23.67■■□□□ 1.38
RNF40-201ENST00000324685 PPP1R9BQ96SB3 815 aa23.67■■□□□ 1.38
RNF40-201ENST00000324685 HELLSQ9NRZ9 838 aa23.67■■□□□ 1.38
RNF40-201ENST00000324685 FAM169AQ9Y6X4 670 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms