RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 RNASE9P60153 205 aaKnown RBP15.04■□□□□ -0
TRIM56-201ENST00000306085 GOLGA6CA6NDK9 693 aa15.04■□□□□ -0
TRIM56-201ENST00000306085 GOLGA6DP0CG33 693 aa15.04■□□□□ -0
TRIM56-201ENST00000306085 VSIG1Q86XK7 387 aa15.04■□□□□ -0
TRIM56-201ENST00000306085 CSRNP2Q9H175 543 aa15.04■□□□□ -0
TRIM56-201ENST00000306085 GOLGA6AQ9NYA3 693 aa15.04■□□□□ -0
TRIM56-201ENST00000306085 CHMP2AO43633 222 aa15.04■□□□□ -0
TRIM56-201ENST00000306085 CASC4Q6P4E1 433 aa15.04■□□□□ -0
TRIM56-201ENST00000306085 PPP2R3AQ06190 1150 aa15.03■□□□□ -0
TRIM56-201ENST00000306085 RBBP5Q15291 538 aaKnown RBP15.03■□□□□ -0
TRIM56-201ENST00000306085 DDX21Q9NR30 783 aaKnown RBP eCLIP15.03■□□□□ -0
TRIM56-201ENST00000306085 DCAF17Q5H9S7 520 aaPredicted RBP15.03■□□□□ -0
TRIM56-201ENST00000306085 HLA-DOAP06340 250 aa15.03■□□□□ -0
TRIM56-201ENST00000306085 GNL1P36915 607 aaPredicted RBP15.03■□□□□ -0
TRIM56-201ENST00000306085 CNPY2Q9Y2B0 182 aa15.03■□□□□ -0
TRIM56-201ENST00000306085 PPP1R12AO14974 1030 aaPredicted RBP15.03■□□□□ -0
TRIM56-201ENST00000306085 GIGYF1O75420 1035 aaPredicted RBP15.03■□□□□ -0
TRIM56-201ENST00000306085 PDCD2Q16342 344 aaPredicted RBP15.03■□□□□ -0
TRIM56-201ENST00000306085 ECM2O94769 699 aaPredicted RBP15.03■□□□□ -0
TRIM56-201ENST00000306085 MARCKSP29966 332 aaPredicted RBP15.03■□□□□ -0
TRIM56-201ENST00000306085 CDR2Q01850 454 aa15.03■□□□□ -0
TRIM56-201ENST00000306085 RAPGEF1Q13905 1077 aa15.03■□□□□ -0
TRIM56-201ENST00000306085 CCDC186Q7Z3E2 898 aa15.03■□□□□ -0
TRIM56-201ENST00000306085 CCDC8Q9H0W5 538 aaPredicted RBP15.03■□□□□ -0
TRIM56-201ENST00000306085 ANLNQ9NQW6 1124 aa15.03■□□□□ -0
TRIM56-201ENST00000306085 SMAP1Q8IYB5 467 aaPredicted RBP15.03■□□□□ -0
TRIM56-201ENST00000306085 LMOD1P29536 600 aaPredicted RBP15.02■□□□□ -0
TRIM56-201ENST00000306085 MYD88Q99836 296 aa15.02■□□□□ -0
TRIM56-201ENST00000306085 DAPK3O43293 454 aa15.02■□□□□ -0
TRIM56-201ENST00000306085 FRMD3A2A2Y4 597 aa15.02■□□□□ -0
TRIM56-201ENST00000306085 PALM3A6NDB9 673 aaPredicted RBP15.02■□□□□ -0
TRIM56-201ENST00000306085 MGARPQ8TDB4 240 aa15.02■□□□□ -0
TRIM56-201ENST00000306085 ARHGAP42A6NI28 874 aa15.02□□□□□ -0.01
TRIM56-201ENST00000306085 ATP2A3Q93084 1043 aa15.02□□□□□ -0.01
TRIM56-201ENST00000306085 SPOPO43791 374 aa15.02□□□□□ -0.01
TRIM56-201ENST00000306085 PTCD1O75127 700 aaKnown RBP15.02□□□□□ -0.01
TRIM56-201ENST00000306085 RAP1GDS1P52306 607 aa15.02□□□□□ -0.01
TRIM56-201ENST00000306085 MAP3K7CLP57077 242 aa15.02□□□□□ -0.01
TRIM56-201ENST00000306085 HHATQ5VTY9 493 aa15.02□□□□□ -0.01
TRIM56-201ENST00000306085 HOMEZQ8IX15 550 aa15.02□□□□□ -0.01
TRIM56-201ENST00000306085 STX8Q9UNK0 236 aa15.02□□□□□ -0.01
TRIM56-201ENST00000306085 OGFRQ9NZT2 677 aa15.02□□□□□ -0.01
TRIM56-201ENST00000306085 RPS6KA2Q15349 733 aa15.02□□□□□ -0.01
TRIM56-201ENST00000306085 CABP5Q9NP86 173 aa15.02□□□□□ -0.01
TRIM56-201ENST00000306085 TTLL3Q9Y4R7 772 aa15.02□□□□□ -0.01
TRIM56-201ENST00000306085 HAUS8Q9BT25 410 aa15.01□□□□□ -0.01
TRIM56-201ENST00000306085 RTL1A6NKG5 1358 aa15.01□□□□□ -0.01
TRIM56-201ENST00000306085 MYO10Q9HD67 2058 aa15.01□□□□□ -0.01
TRIM56-201ENST00000306085 DNAJC8O75937 253 aaPredicted RBP15.01□□□□□ -0.01
TRIM56-201ENST00000306085 ZBTB21Q9ULJ3 1066 aa15.01□□□□□ -0.01
TRIM56-201ENST00000306085 APOEP02649 317 aa15.01□□□□□ -0.01
TRIM56-201ENST00000306085 GABPB2Q8TAK5 448 aaPredicted RBP15.01□□□□□ -0.01
TRIM56-201ENST00000306085 MAN1A1P33908 653 aa15□□□□□ -0.01
TRIM56-201ENST00000306085 FYCO1Q9BQS8 1478 aa15□□□□□ -0.01
TRIM56-201ENST00000306085 ARHGAP25P42331 645 aa15□□□□□ -0.01
TRIM56-201ENST00000306085 AP1ARQ63HQ0 302 aa15□□□□□ -0.01
TRIM56-201ENST00000306085 C6orf229H3BNL8 230 aa15□□□□□ -0.01
TRIM56-201ENST00000306085 ACTN4O43707 911 aaKnown RBP15□□□□□ -0.01
TRIM56-201ENST00000306085 RRS1Q15050 365 aaKnown RBP15□□□□□ -0.01
TRIM56-201ENST00000306085 KRT3P12035 628 aa15□□□□□ -0.01
TRIM56-201ENST00000306085 TMTC4Q5T4D3 741 aa15□□□□□ -0.01
TRIM56-201ENST00000306085 NXNQ6DKJ4 435 aa15□□□□□ -0.01
TRIM56-201ENST00000306085 SYT10Q6XYQ8 523 aa15□□□□□ -0.01
TRIM56-201ENST00000306085 TSPY3P0CV98 308 aa15□□□□□ -0.01
TRIM56-201ENST00000306085 TSPY8P0CW00 308 aa15□□□□□ -0.01
TRIM56-201ENST00000306085 SPAG1Q07617 926 aa15□□□□□ -0.01
TRIM56-201ENST00000306085 ZSCAN16Q9H4T2 348 aaPredicted RBP15□□□□□ -0.01
TRIM56-201ENST00000306085 BAG3O95817 575 aa15□□□□□ -0.01
TRIM56-201ENST00000306085 KCNG4Q8TDN1 519 aa15□□□□□ -0.01
TRIM56-201ENST00000306085 BAG2O95816 211 aa15□□□□□ -0.01
TRIM56-201ENST00000306085 TRIM31Q9BZY9 425 aa15□□□□□ -0.01
TRIM56-201ENST00000306085 DNAJC25Q9H1X3 360 aa14.99□□□□□ -0.01
TRIM56-201ENST00000306085 MAFGO15525 162 aa14.99□□□□□ -0.01
TRIM56-201ENST00000306085 IFIT1BQ5T764 474 aaKnown RBP14.99□□□□□ -0.01
TRIM56-201ENST00000306085 TBC1D2Q9BYX2 928 aa14.99□□□□□ -0.01
TRIM56-201ENST00000306085 SCHIP1Q9P0W5 487 aaPredicted RBP14.99□□□□□ -0.01
TRIM56-201ENST00000306085 NBPF7P0C2Y1 421 aaPredicted RBP14.99□□□□□ -0.01
TRIM56-201ENST00000306085 BAIAP2L1Q9UHR4 511 aa14.99□□□□□ -0.01
TRIM56-201ENST00000306085 POLA1P09884 1462 aaPredicted RBP14.99□□□□□ -0.01
TRIM56-201ENST00000306085 ANKRD30BQ9BXX2 1392 aa14.99□□□□□ -0.01
TRIM56-201ENST00000306085 UBL4BQ8N7F7 174 aa14.99□□□□□ -0.01
TRIM56-201ENST00000306085 C6orf50Q9HD87 102 aa14.99□□□□□ -0.01
TRIM56-201ENST00000306085 GNAT3A8MTJ3 354 aa14.99□□□□□ -0.01
TRIM56-201ENST00000306085 STX10O60499 249 aa14.99□□□□□ -0.01
TRIM56-201ENST00000306085 ZBTB41Q5SVQ8 909 aa14.99□□□□□ -0.01
TRIM56-201ENST00000306085 IRX4P78413 519 aa14.99□□□□□ -0.01
TRIM56-201ENST00000306085 SDCCAG3Q96C92 435 aa14.99□□□□□ -0.01
TRIM56-201ENST00000306085 DBN1Q16643 649 aa14.99□□□□□ -0.01
TRIM56-201ENST00000306085 SETD1BQ9UPS6 1966 aaKnown RBP14.98□□□□□ -0.01
TRIM56-201ENST00000306085 C8orf74Q6P047 294 aa14.98□□□□□ -0.01
TRIM56-201ENST00000306085 PRAM1Q96QH2 718 aa14.98□□□□□ -0.01
TRIM56-201ENST00000306085 PRDM11Q9NQV5 511 aa14.98□□□□□ -0.01
TRIM56-201ENST00000306085 RNF8O76064 485 aa14.98□□□□□ -0.01
TRIM56-201ENST00000306085 PLCB4Q15147 1175 aa14.98□□□□□ -0.01
TRIM56-201ENST00000306085 KIFAP3Q92845 792 aa14.98□□□□□ -0.01
TRIM56-201ENST00000306085 NCOA7Q8NI08 942 aa14.98□□□□□ -0.01
TRIM56-201ENST00000306085 NOC2LQ9Y3T9 749 aaKnown RBP14.98□□□□□ -0.01
TRIM56-201ENST00000306085 ABTB1Q969K4 478 aaPredicted RBP14.98□□□□□ -0.01
TRIM56-201ENST00000306085 RIPOR2Q9Y4F9 1068 aa14.98□□□□□ -0.01
TRIM56-201ENST00000306085 RFX1P22670 979 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms