RNA–Protein interactions for RNA: ENST00000302500.4

CLCC1-201, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-201ENST00000302500 SCARF1Q14162 830 aa14.12□□□□□ -0.15
CLCC1-201ENST00000302500 HHIPL1Q96JK4 782 aa14.12□□□□□ -0.15
CLCC1-201ENST00000302500 MKRN1Q9UHC7 482 aaKnown RBP14.12□□□□□ -0.15
CLCC1-201ENST00000302500 PA2G4Q9UQ80 394 aaKnown RBP14.12□□□□□ -0.15
CLCC1-201ENST00000302500 AKAP11Q9UKA4 1901 aa14.11□□□□□ -0.15
CLCC1-201ENST00000302500 PNMA6EA0A0J9YXQ4 647 aa14.11□□□□□ -0.15
CLCC1-201ENST00000302500 ZBTB7BO15156 539 aaPredicted RBP14.11□□□□□ -0.15
CLCC1-201ENST00000302500 IPO8O15397 1037 aaKnown RBP14.11□□□□□ -0.15
CLCC1-201ENST00000302500 ZKSCAN2Q63HK3 967 aa14.11□□□□□ -0.15
CLCC1-201ENST00000302500 ZNF804AQ7Z570 1209 aa14.11□□□□□ -0.15
CLCC1-201ENST00000302500 USP48Q86UV5 1035 aa14.11□□□□□ -0.15
CLCC1-201ENST00000302500 HOXD11P31277 338 aaPredicted RBP14.1□□□□□ -0.15
CLCC1-201ENST00000302500 POLA2Q14181 598 aa14.1□□□□□ -0.15
CLCC1-201ENST00000302500 TAF7LQ5H9L4 462 aa14.1□□□□□ -0.15
CLCC1-201ENST00000302500 ANGEL2Q5VTE6 544 aaKnown RBP14.1□□□□□ -0.15
CLCC1-201ENST00000302500 KRT26Q7Z3Y9 468 aa14.1□□□□□ -0.15
CLCC1-201ENST00000302500 KIAA0825Q8IV33 1275 aa14.1□□□□□ -0.15
CLCC1-201ENST00000302500 CLUAP1Q96AJ1 413 aa14.1□□□□□ -0.15
CLCC1-201ENST00000302500 OTOFQ9HC10 1997 aa14.1□□□□□ -0.15
CLCC1-201ENST00000302500 FAM155AB1AL88 458 aaPredicted RBP14.09□□□□□ -0.15
CLCC1-201ENST00000302500 PLIN1O60240 522 aa14.09□□□□□ -0.15
CLCC1-201ENST00000302500 CELF2O95319 508 aaKnown RBP14.09□□□□□ -0.15
CLCC1-201ENST00000302500 GNAI3P08754 354 aa14.09□□□□□ -0.15
CLCC1-201ENST00000302500 HIBADHP31937 336 aaKnown RBP14.09□□□□□ -0.15
CLCC1-201ENST00000302500 KCNJ4P48050 445 aa14.09□□□□□ -0.15
CLCC1-201ENST00000302500 PUM3Q15397 648 aaKnown RBP14.09□□□□□ -0.15
CLCC1-201ENST00000302500 METTL24Q5JXM2 366 aa14.09□□□□□ -0.15
CLCC1-201ENST00000302500 RBM26Q5T8P6 1007 aaKnown RBP14.09□□□□□ -0.15
CLCC1-201ENST00000302500 FRAT1Q92837 279 aaPredicted RBP14.09□□□□□ -0.15
CLCC1-201ENST00000302500 SPDYE2BA6NHP3 402 aa14.08□□□□□ -0.16
CLCC1-201ENST00000302500 G3V3G9 751 aa14.08□□□□□ -0.16
CLCC1-201ENST00000302500 SPDYE6P0CI01 402 aa14.08□□□□□ -0.16
CLCC1-201ENST00000302500 BCAMP50895 628 aa14.08□□□□□ -0.16
CLCC1-201ENST00000302500 DCAF8Q5TAQ9 597 aa14.08□□□□□ -0.16
CLCC1-201ENST00000302500 SSH3Q8TE77 659 aa14.08□□□□□ -0.16
CLCC1-201ENST00000302500 LPIN2Q92539 896 aa14.08□□□□□ -0.16
CLCC1-201ENST00000302500 JAG2Q9Y219 1238 aa14.08□□□□□ -0.16
CLCC1-201ENST00000302500 IL15P40933 162 aaPredicted RBP14.07□□□□□ -0.16
CLCC1-201ENST00000302500 DEFB115Q30KQ5 88 aa14.07□□□□□ -0.16
CLCC1-201ENST00000302500 CDCA5Q96FF9 252 aa14.07□□□□□ -0.16
CLCC1-201ENST00000302500 PRMT6Q96LA8 375 aaPredicted RBP14.07□□□□□ -0.16
CLCC1-201ENST00000302500 WBP1LQ9NX94 342 aa14.07□□□□□ -0.16
CLCC1-201ENST00000302500 SCAF8Q9UPN6 1271 aaKnown RBP14.07□□□□□ -0.16
CLCC1-201ENST00000302500 WDR33Q9C0J8 1336 aaKnown RBP14.07□□□□□ -0.16
CLCC1-201ENST00000302500 GNAI2P04899 355 aa14.06□□□□□ -0.16
CLCC1-201ENST00000302500 DZIP1LQ8IYY4 767 aaKnown RBP14.06□□□□□ -0.16
CLCC1-201ENST00000302500 SIL1Q9H173 461 aa14.06□□□□□ -0.16
CLCC1-201ENST00000302500 MYO5AQ9Y4I1 1855 aaKnown RBP14.06□□□□□ -0.16
CLCC1-201ENST00000302500 SRGAP3O43295 1099 aa14.05□□□□□ -0.16
CLCC1-201ENST00000302500 HSPA1AP0DMV8 641 aaKnown RBP14.05□□□□□ -0.16
CLCC1-201ENST00000302500 HSPA1BP0DMV9 641 aaKnown RBP14.05□□□□□ -0.16
CLCC1-201ENST00000302500 ADORA1P30542 326 aa14.05□□□□□ -0.16
CLCC1-201ENST00000302500 MFSD14BQ5SR56 506 aa14.05□□□□□ -0.16
CLCC1-201ENST00000302500 CYP4F22Q6NT55 531 aa14.05□□□□□ -0.16
CLCC1-201ENST00000302500 DCPSQ96C86 337 aaKnown RBP14.05□□□□□ -0.16
CLCC1-201ENST00000302500 ZIC5Q96T25 663 aa14.05□□□□□ -0.16
CLCC1-201ENST00000302500 HTTP42858 3142 aa14.04□□□□□ -0.16
CLCC1-201ENST00000302500 CFAP100Q494V2 611 aa14.04□□□□□ -0.16
CLCC1-201ENST00000302500 OGFOD1Q8N543 542 aa14.04□□□□□ -0.16
CLCC1-201ENST00000302500 PANK1Q8TE04 598 aa14.04□□□□□ -0.16
CLCC1-201ENST00000302500 CAPNS2Q96L46 248 aa14.04□□□□□ -0.16
CLCC1-201ENST00000302500 MRIQ9BWK5 157 aa14.04□□□□□ -0.16
CLCC1-201ENST00000302500 SERPINA10Q9UK55 444 aa14.04□□□□□ -0.16
CLCC1-201ENST00000302500 IQSEC3Q9UPP2 1182 aaPredicted RBP14.04□□□□□ -0.16
CLCC1-201ENST00000302500 NOP58Q9Y2X3 529 aaKnown RBP14.04□□□□□ -0.16
CLCC1-201ENST00000302500 SALL1Q9NSC2 1324 aa14.04□□□□□ -0.16
CLCC1-201ENST00000302500 MYH2Q9UKX2 1941 aa14.03□□□□□ -0.16
CLCC1-201ENST00000302500 PHKA1P46020 1223 aa14.03□□□□□ -0.16
CLCC1-201ENST00000302500 ATP8B2P98198 1209 aa14.03□□□□□ -0.16
CLCC1-201ENST00000302500 ATP2B3Q16720 1220 aa14.03□□□□□ -0.16
CLCC1-201ENST00000302500 SULF1Q8IWU6 871 aa14.03□□□□□ -0.16
CLCC1-201ENST00000302500 ZNF384Q8TF68 577 aa14.03□□□□□ -0.16
CLCC1-201ENST00000302500 TEPSINQ96N21 525 aa14.03□□□□□ -0.16
CLCC1-201ENST00000302500 GBA2Q9HCG7 927 aaPredicted RBP14.03□□□□□ -0.16
CLCC1-201ENST00000302500 HDAC5Q9UQL6 1122 aa14.03□□□□□ -0.16
CLCC1-201ENST00000302500 PDS5AQ29RF7 1337 aaKnown RBP14.03□□□□□ -0.16
CLCC1-201ENST00000302500 RFX7Q2KHR2 1363 aa14.03□□□□□ -0.16
CLCC1-201ENST00000302500 FOXN1O15353 648 aa14.02□□□□□ -0.17
CLCC1-201ENST00000302500 HDLBPQ00341 1268 aaKnown RBP14.02□□□□□ -0.17
CLCC1-201ENST00000302500 TFCP2Q12800 502 aa14.02□□□□□ -0.17
CLCC1-201ENST00000302500 SPDYE2Q495Y8 402 aa14.02□□□□□ -0.17
CLCC1-201ENST00000302500 PRAMEF18Q5VWM3 479 aa14.02□□□□□ -0.17
CLCC1-201ENST00000302500 CEP85Q6P2H3 762 aa14.02□□□□□ -0.17
CLCC1-201ENST00000302500 CDAN1Q8IWY9 1227 aa14.02□□□□□ -0.17
CLCC1-201ENST00000302500 SIRT2Q8IXJ6 389 aa14.02□□□□□ -0.17
CLCC1-201ENST00000302500 FBXW7Q969H0 707 aa14.02□□□□□ -0.17
CLCC1-201ENST00000302500 C1orf115Q9H7X2 142 aa14.02□□□□□ -0.17
CLCC1-201ENST00000302500 ABT1Q9ULW3 272 aaKnown RBP14.02□□□□□ -0.17
CLCC1-201ENST00000302500 SUGT1Q9Y2Z0 365 aa14.02□□□□□ -0.17
CLCC1-201ENST00000302500 DOCK2Q92608 1830 aa14.02□□□□□ -0.17
CLCC1-201ENST00000302500 CDK5RAP2Q96SN8 1893 aa14.02□□□□□ -0.17
CLCC1-201ENST00000302500 MAST2Q6P0Q8 1798 aa14.01□□□□□ -0.17
CLCC1-201ENST00000302500 AOC2O75106 756 aa14.01□□□□□ -0.17
CLCC1-201ENST00000302500 IFIT1P09914 478 aaKnown RBP14.01□□□□□ -0.17
CLCC1-201ENST00000302500 SLC5A1P13866 664 aa14.01□□□□□ -0.17
CLCC1-201ENST00000302500 TIMM10P62072 90 aa14.01□□□□□ -0.17
CLCC1-201ENST00000302500 FKBP1BP68106 108 aa14.01□□□□□ -0.17
CLCC1-201ENST00000302500 MAP3K11Q16584 847 aa14.01□□□□□ -0.17
CLCC1-201ENST00000302500 CCDC102BQ68D86 513 aa14.01□□□□□ -0.17
CLCC1-201ENST00000302500 APOBEC3HQ6NTF7 200 aaKnown RBP14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms