RNA–Protein interactions for RNA: ENST00000293845.7

CCDC42-201, Transcript of coiled-coil domain containing 42, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC42, Length 1,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-201ENST00000293845 TTLL5Q6EMB2 1281 aa16.23■□□□□ 0.19
CCDC42-201ENST00000293845 GTF2IP78347 998 aa16.22■□□□□ 0.19
CCDC42-201ENST00000293845 RASGRF1Q13972 1273 aa16.22■□□□□ 0.19
CCDC42-201ENST00000293845 ZBTB47Q9UFB7 747 aaPredicted RBP16.22■□□□□ 0.19
CCDC42-201ENST00000293845 DENND2AQ9ULE3 1009 aa16.22■□□□□ 0.19
CCDC42-201ENST00000293845 IQSEC3Q9UPP2 1182 aaPredicted RBP16.22■□□□□ 0.19
CCDC42-201ENST00000293845 MYO3BQ8WXR4 1341 aa16.21■□□□□ 0.19
CCDC42-201ENST00000293845 FRAT2O75474 233 aaPredicted RBP16.21■□□□□ 0.19
CCDC42-201ENST00000293845 DDNO94850 711 aaPredicted RBP16.21■□□□□ 0.19
CCDC42-201ENST00000293845 TTC39AQ5SRH9 613 aa16.21■□□□□ 0.19
CCDC42-201ENST00000293845 RSBN1LQ6PCB5 846 aaPredicted RBP16.21■□□□□ 0.19
CCDC42-201ENST00000293845 CENPQQ7L2Z9 268 aaPredicted RBP16.21■□□□□ 0.19
CCDC42-201ENST00000293845 CHD1LQ86WJ1 897 aa16.21■□□□□ 0.19
CCDC42-201ENST00000293845 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.21■□□□□ 0.19
CCDC42-201ENST00000293845 L3MBTL3Q96JM7 780 aaPredicted RBP16.21■□□□□ 0.19
CCDC42-201ENST00000293845 CCDC136Q96JN2 1154 aa16.21■□□□□ 0.19
CCDC42-201ENST00000293845 PPP4R2Q9NY27 417 aa16.21■□□□□ 0.19
CCDC42-201ENST00000293845 MYO5AQ9Y4I1 1855 aaKnown RBP16.21■□□□□ 0.18
CCDC42-201ENST00000293845 SALL3Q9BXA9 1300 aa16.2■□□□□ 0.18
CCDC42-201ENST00000293845 DOCK2Q92608 1830 aa16.2■□□□□ 0.18
CCDC42-201ENST00000293845 RPS12P25398 132 aaKnown RBP16.2■□□□□ 0.18
CCDC42-201ENST00000293845 MCAMP43121 646 aa16.2■□□□□ 0.18
CCDC42-201ENST00000293845 B4GALNT3Q6L9W6 998 aa16.2■□□□□ 0.18
CCDC42-201ENST00000293845 AGBL3Q8NEM8 1001 aa16.2■□□□□ 0.18
CCDC42-201ENST00000293845 TBC1D22AQ8WUA7 517 aa16.2■□□□□ 0.18
CCDC42-201ENST00000293845 GMLQ99445 158 aa16.2■□□□□ 0.18
CCDC42-201ENST00000293845 GJA3Q9Y6H8 435 aa16.2■□□□□ 0.18
CCDC42-201ENST00000293845 SALL1Q9NSC2 1324 aa16.19■□□□□ 0.18
CCDC42-201ENST00000293845 SCARF1Q14162 830 aa16.19■□□□□ 0.18
CCDC42-201ENST00000293845 WDR66Q8TBY9 1149 aa16.19■□□□□ 0.18
CCDC42-201ENST00000293845 DPF2Q92785 391 aa16.19■□□□□ 0.18
CCDC42-201ENST00000293845 FBXW7Q969H0 707 aa16.19■□□□□ 0.18
CCDC42-201ENST00000293845 LNPKQ9C0E8 428 aa16.19■□□□□ 0.18
CCDC42-201ENST00000293845 HMG20BQ9P0W2 317 aa16.19■□□□□ 0.18
CCDC42-201ENST00000293845 TTC41PQ6P2S7 1318 aa16.19■□□□□ 0.18
CCDC42-201ENST00000293845 ATP5JP18859 108 aa16.18■□□□□ 0.18
CCDC42-201ENST00000293845 YY1P25490 414 aa16.18■□□□□ 0.18
CCDC42-201ENST00000293845 SCNN1DP51172 638 aa16.18■□□□□ 0.18
CCDC42-201ENST00000293845 CHAF1AQ13111 956 aaPredicted RBP16.18■□□□□ 0.18
CCDC42-201ENST00000293845 MFSD14BQ5SR56 506 aa16.18■□□□□ 0.18
CCDC42-201ENST00000293845 C16orf71Q8IYS4 520 aaPredicted RBP16.18■□□□□ 0.18
CCDC42-201ENST00000293845 CERS5Q8N5B7 392 aa16.18■□□□□ 0.18
CCDC42-201ENST00000293845 SPATA5Q8NB90 893 aa16.18■□□□□ 0.18
CCDC42-201ENST00000293845 GPATCH3Q96I76 525 aa16.18■□□□□ 0.18
CCDC42-201ENST00000293845 BCL11AQ9H165 835 aa16.18■□□□□ 0.18
CCDC42-201ENST00000293845 ECHDC1Q9NTX5 307 aa16.18■□□□□ 0.18
CCDC42-201ENST00000293845 JAG2Q9Y219 1238 aa16.18■□□□□ 0.18
CCDC42-201ENST00000293845 ZBTB12Q9Y330 459 aaPredicted RBP16.18■□□□□ 0.18
CCDC42-201ENST00000293845 MAST2Q6P0Q8 1798 aa16.18■□□□□ 0.18
CCDC42-201ENST00000293845 GMPSP49915 693 aaPredicted RBP16.17■□□□□ 0.18
CCDC42-201ENST00000293845 OTUD7AQ8TE49 926 aaPredicted RBP16.17■□□□□ 0.18
CCDC42-201ENST00000293845 MXD3Q9BW11 206 aa16.17■□□□□ 0.18
CCDC42-201ENST00000293845 GPRC5DQ9NZD1 345 aa16.17■□□□□ 0.18
CCDC42-201ENST00000293845 SUGT1Q9Y2Z0 365 aa16.17■□□□□ 0.18
CCDC42-201ENST00000293845 MYH7P12883 1935 aa16.17■□□□□ 0.18
CCDC42-201ENST00000293845 MX1P20591 662 aa16.16■□□□□ 0.18
CCDC42-201ENST00000293845 MMP14P50281 582 aa16.16■□□□□ 0.18
CCDC42-201ENST00000293845 PI16Q6UXB8 463 aa16.16■□□□□ 0.18
CCDC42-201ENST00000293845 ZGPATQ8N5A5 531 aaKnown RBP16.16■□□□□ 0.18
CCDC42-201ENST00000293845 STAP2Q9UGK3 403 aa16.16■□□□□ 0.18
CCDC42-201ENST00000293845 MYH2Q9UKX2 1941 aa16.16■□□□□ 0.18
CCDC42-201ENST00000293845 ECM29Q5VYK3 1845 aa16.16■□□□□ 0.18
CCDC42-201ENST00000293845 POTECB2RU33 542 aa16.15■□□□□ 0.18
CCDC42-201ENST00000293845 IQCA1LA6NCM1 817 aa16.14■□□□□ 0.17
CCDC42-201ENST00000293845 IGSF3O75054 1194 aa16.14■□□□□ 0.17
CCDC42-201ENST00000293845 USP17L8P0C7I0 530 aa16.14■□□□□ 0.17
CCDC42-201ENST00000293845 LMOD1P29536 600 aaPredicted RBP16.14■□□□□ 0.17
CCDC42-201ENST00000293845 ZAP70P43403 619 aa16.14■□□□□ 0.17
CCDC42-201ENST00000293845 PDE1AP54750 535 aa16.14■□□□□ 0.17
CCDC42-201ENST00000293845 ZNF280AP59817 542 aaPredicted RBP16.14■□□□□ 0.17
CCDC42-201ENST00000293845 KIAA0825Q8IV33 1275 aa16.14■□□□□ 0.17
CCDC42-201ENST00000293845 PI4K2BQ8TCG2 481 aa16.14■□□□□ 0.17
CCDC42-201ENST00000293845 OSBPL3Q9H4L5 887 aa16.14■□□□□ 0.17
CCDC42-201ENST00000293845 SNRKQ9NRH2 765 aa16.14■□□□□ 0.17
CCDC42-201ENST00000293845 CNOT7Q9UIV1 285 aaKnown RBP16.14■□□□□ 0.17
CCDC42-201ENST00000293845 AOX1Q06278 1338 aa16.14■□□□□ 0.17
CCDC42-201ENST00000293845 ADAMTSL1Q8N6G6 1762 aa16.14■□□□□ 0.17
CCDC42-201ENST00000293845 ERC2O15083 957 aa16.13■□□□□ 0.17
CCDC42-201ENST00000293845 GLRX3O76003 335 aaKnown RBP16.13■□□□□ 0.17
CCDC42-201ENST00000293845 CYP2E1P05181 493 aaPredicted RBP16.13■□□□□ 0.17
CCDC42-201ENST00000293845 GRIK5Q16478 980 aa16.13■□□□□ 0.17
CCDC42-201ENST00000293845 MICALL2Q8IY33 904 aa16.13■□□□□ 0.17
CCDC42-201ENST00000293845 HAUS7Q99871 368 aa16.13■□□□□ 0.17
CCDC42-201ENST00000293845 BOLA2Q9H3K6 86 aa16.13■□□□□ 0.17
CCDC42-201ENST00000293845 HACL1Q9UJ83 578 aa16.13■□□□□ 0.17
CCDC42-201ENST00000293845 AK9Q5TCS8 1911 aa16.13■□□□□ 0.17
CCDC42-201ENST00000293845 VEGFAP15692 232 aaPredicted RBP16.13■□□□□ 0.17
CCDC42-201ENST00000293845 PDE4AP27815 886 aa16.13■□□□□ 0.17
CCDC42-201ENST00000293845 PRDX5P30044 214 aa16.13■□□□□ 0.17
CCDC42-201ENST00000293845 TSHZ3Q63HK5 1081 aa16.13■□□□□ 0.17
CCDC42-201ENST00000293845 SPTY2D1Q68D10 685 aaPredicted RBP16.13■□□□□ 0.17
CCDC42-201ENST00000293845 PLEKHM2Q8IWE5 1019 aa16.13■□□□□ 0.17
CCDC42-201ENST00000293845 OGFOD1Q8N543 542 aa16.13■□□□□ 0.17
CCDC42-201ENST00000293845 ZNF526Q8TF50 670 aaPredicted RBP16.13■□□□□ 0.17
CCDC42-201ENST00000293845 GPBP1L1Q9HC44 474 aaPredicted RBP16.13■□□□□ 0.17
CCDC42-201ENST00000293845 NMRK2Q9NPI5 230 aa16.13■□□□□ 0.17
CCDC42-201ENST00000293845 HDAC9Q9UKV0 1011 aa16.13■□□□□ 0.17
CCDC42-201ENST00000293845 TTF2Q9UNY4 1162 aaKnown RBP16.13■□□□□ 0.17
CCDC42-201ENST00000293845 MAST3O60307 1309 aa16.12■□□□□ 0.17
CCDC42-201ENST00000293845 SHTN1A0MZ66 631 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms