RNA–Protein interactions for RNA: ENST00000288723.8

RAB28-201, Transcript of RAB28, member RAS oncogene family, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RAB28, Length 1,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-201ENST00000288723 ZNF408Q9H9D4 720 aa25.49■■□□□ 1.67
RAB28-201ENST00000288723 PNMA6EA0A0J9YXQ4 647 aa25.49■■□□□ 1.67
RAB28-201ENST00000288723 ADM5C9JUS6 153 aa25.49■■□□□ 1.67
RAB28-201ENST00000288723 F8W031 263 aaPredicted RBP25.49■■□□□ 1.67
RAB28-201ENST00000288723 NBPF9Q3BBW0 867 aa25.49■■□□□ 1.67
RAB28-201ENST00000288723 CAVIN4Q5BKX8 364 aa25.49■■□□□ 1.67
RAB28-201ENST00000288723 ANGEL2Q5VTE6 544 aaKnown RBP25.49■■□□□ 1.67
RAB28-201ENST00000288723 CEP126Q9P2H0 1117 aa25.49■■□□□ 1.67
RAB28-201ENST00000288723 FBXO3Q9UK99 471 aa25.49■■□□□ 1.67
RAB28-201ENST00000288723 SCAF8Q9UPN6 1271 aaKnown RBP25.49■■□□□ 1.67
RAB28-201ENST00000288723 ZBTB7BO15156 539 aaPredicted RBP25.48■■□□□ 1.67
RAB28-201ENST00000288723 ABT1Q9ULW3 272 aaKnown RBP25.48■■□□□ 1.67
RAB28-201ENST00000288723 CELF2O95319 508 aaKnown RBP25.47■■□□□ 1.67
RAB28-201ENST00000288723 IFIT1P09914 478 aaKnown RBP25.47■■□□□ 1.67
RAB28-201ENST00000288723 IL15P40933 162 aaPredicted RBP25.47■■□□□ 1.67
RAB28-201ENST00000288723 LPIN2Q92539 896 aa25.47■■□□□ 1.67
RAB28-201ENST00000288723 HDAC9Q9UKV0 1011 aa25.47■■□□□ 1.67
RAB28-201ENST00000288723 POLR2AP24928 1970 aaKnown RBP25.46■■□□□ 1.67
RAB28-201ENST00000288723 FAM205AQ6ZU69 1335 aa25.46■■□□□ 1.67
RAB28-201ENST00000288723 SLC5A1P13866 664 aa25.46■■□□□ 1.67
RAB28-201ENST00000288723 YTHDC1Q96MU7 727 aaKnown RBP25.46■■□□□ 1.67
RAB28-201ENST00000288723 WNT10BO00744 389 aa25.45■■□□□ 1.66
RAB28-201ENST00000288723 FRAT2O75474 233 aaPredicted RBP25.45■■□□□ 1.66
RAB28-201ENST00000288723 CHAF1AQ13111 956 aaPredicted RBP25.45■■□□□ 1.66
RAB28-201ENST00000288723 ATP2B3Q16720 1220 aa25.44■■□□□ 1.66
RAB28-201ENST00000288723 MFSD14BQ5SR56 506 aa25.44■■□□□ 1.66
RAB28-201ENST00000288723 SULF1Q8IWU6 871 aa25.44■■□□□ 1.66
RAB28-201ENST00000288723 PCDHAC2Q9Y5I4 1007 aa25.44■■□□□ 1.66
RAB28-201ENST00000288723 CNTNAP1P78357 1384 aa25.43■■□□□ 1.66
RAB28-201ENST00000288723 FKBP1AP62942 108 aaKnown RBP25.43■■□□□ 1.66
RAB28-201ENST00000288723 JMYQ8N9B5 988 aa25.43■■□□□ 1.66
RAB28-201ENST00000288723 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.42■■□□□ 1.66
RAB28-201ENST00000288723 TRPM7Q96QT4 1865 aa25.42■■□□□ 1.66
RAB28-201ENST00000288723 TFCP2Q12800 502 aa25.42■■□□□ 1.66
RAB28-201ENST00000288723 DEFB115Q30KQ5 88 aa25.42■■□□□ 1.66
RAB28-201ENST00000288723 VEGFBP49765 207 aa25.41■■□□□ 1.66
RAB28-201ENST00000288723 MMP14P50281 582 aa25.41■■□□□ 1.66
RAB28-201ENST00000288723 ATP8B2P98198 1209 aa25.41■■□□□ 1.66
RAB28-201ENST00000288723 GRIK5Q16478 980 aa25.41■■□□□ 1.66
RAB28-201ENST00000288723 RASSF10A6NK89 507 aa25.4■■□□□ 1.66
RAB28-201ENST00000288723 TIMM10P62072 90 aa25.4■■□□□ 1.66
RAB28-201ENST00000288723 DLGAP5Q15398 846 aa25.4■■□□□ 1.66
RAB28-201ENST00000288723 ZBED3Q96IU2 234 aaPredicted RBP25.4■■□□□ 1.66
RAB28-201ENST00000288723 COG6Q9Y2V7 657 aa25.4■■□□□ 1.66
RAB28-201ENST00000288723 ADORA1P30542 326 aa25.4■■□□□ 1.66
RAB28-201ENST00000288723 TTF2Q9UNY4 1162 aaKnown RBP25.4■■□□□ 1.66
RAB28-201ENST00000288723 TLL2Q9Y6L7 1015 aa25.4■■□□□ 1.66
RAB28-201ENST00000288723 MS4A1P11836 297 aa25.39■■□□□ 1.65
RAB28-201ENST00000288723 POLA2Q14181 598 aa25.39■■□□□ 1.65
RAB28-201ENST00000288723 CFAP100Q494V2 611 aa25.39■■□□□ 1.65
RAB28-201ENST00000288723 PRAMEF18Q5VWM3 479 aa25.39■■□□□ 1.65
RAB28-201ENST00000288723 PAXIP1Q6ZW49 1069 aaPredicted RBP25.39■■□□□ 1.65
RAB28-201ENST00000288723 CDCA5Q96FF9 252 aa25.39■■□□□ 1.65
RAB28-201ENST00000288723 PITPNM2Q9BZ72 1349 aa25.38■■□□□ 1.65
RAB28-201ENST00000288723 RBM5P52756 815 aaKnown RBP eCLIP25.38■■□□□ 1.65
RAB28-201ENST00000288723 G3BP1Q13283 466 aaKnown RBP eCLIP25.38■■□□□ 1.65
RAB28-201ENST00000288723 SAPCD2Q86UD0 394 aa25.38■■□□□ 1.65
RAB28-201ENST00000288723 GRM1Q13255 1194 aa25.37■■□□□ 1.65
RAB28-201ENST00000288723 SSH3Q8TE77 659 aa25.37■■□□□ 1.65
RAB28-201ENST00000288723 PHKA1P46020 1223 aa25.37■■□□□ 1.65
RAB28-201ENST00000288723 MVPQ14764 893 aaKnown RBP25.37■■□□□ 1.65
RAB28-201ENST00000288723 C20orf194Q5TEA3 1177 aa25.37■■□□□ 1.65
RAB28-201ENST00000288723 PRMT6Q96LA8 375 aaPredicted RBP25.37■■□□□ 1.65
RAB28-201ENST00000288723 AOX1Q06278 1338 aa25.36■■□□□ 1.65
RAB28-201ENST00000288723 A0A1B0GUL7 405 aa25.36■■□□□ 1.65
RAB28-201ENST00000288723 CYP4F22Q6NT55 531 aa25.35■■□□□ 1.65
RAB28-201ENST00000288723 MTMR14Q8NCE2 650 aa25.35■■□□□ 1.65
RAB28-201ENST00000288723 SPDYE2BA6NHP3 402 aa25.35■■□□□ 1.65
RAB28-201ENST00000288723 SPDYE6P0CI01 402 aa25.35■■□□□ 1.65
RAB28-201ENST00000288723 CEP85Q6P2H3 762 aa25.35■■□□□ 1.65
RAB28-201ENST00000288723 TBC1D22AQ8WUA7 517 aa25.35■■□□□ 1.65
RAB28-201ENST00000288723 COL1A1P02452 1464 aaPredicted RBP25.34■■□□□ 1.65
RAB28-201ENST00000288723 CLRN2A0PK11 232 aa25.34■■□□□ 1.65
RAB28-201ENST00000288723 SURF6O75683 361 aaKnown RBP25.34■■□□□ 1.65
RAB28-201ENST00000288723 CCDC102BQ68D86 513 aa25.34■■□□□ 1.65
RAB28-201ENST00000288723 NEUROD6Q96NK8 337 aa25.34■■□□□ 1.65
RAB28-201ENST00000288723 GBA2Q9HCG7 927 aaPredicted RBP25.34■■□□□ 1.65
RAB28-201ENST00000288723 AKAP2Q9Y2D5 859 aa25.34■■□□□ 1.65
RAB28-201ENST00000288723 XAGE2Q96GT9 111 aa25.33■■□□□ 1.65
RAB28-201ENST00000288723 GNL3LQ9NVN8 582 aaKnown RBP25.33■■□□□ 1.65
RAB28-201ENST00000288723 WDR33Q9C0J8 1336 aaKnown RBP25.33■■□□□ 1.65
RAB28-201ENST00000288723 C2orf69Q8N8R5 385 aa25.33■■□□□ 1.64
RAB28-201ENST00000288723 CAPNS2Q96L46 248 aa25.33■■□□□ 1.64
RAB28-201ENST00000288723 SERPINA10Q9UK55 444 aa25.33■■□□□ 1.64
RAB28-201ENST00000288723 HUNKP57058 714 aa25.32■■□□□ 1.64
RAB28-201ENST00000288723 OS9Q13438 667 aaPredicted RBP25.32■■□□□ 1.64
RAB28-201ENST00000288723 DDX19BQ9UMR2 479 aa25.32■■□□□ 1.64
RAB28-201ENST00000288723 CRKP46108 304 aa25.31■■□□□ 1.64
RAB28-201ENST00000288723 MYO1BO43795 1136 aa25.3■■□□□ 1.64
RAB28-201ENST00000288723 APOBEC3FQ8IUX4 373 aaKnown RBP25.3■■□□□ 1.64
RAB28-201ENST00000288723 WDR66Q8TBY9 1149 aa25.3■■□□□ 1.64
RAB28-201ENST00000288723 VEZTQ9HBM0 779 aa25.3■■□□□ 1.64
RAB28-201ENST00000288723 ARAP2Q8WZ64 1704 aa25.3■■□□□ 1.64
RAB28-201ENST00000288723 TDRD3Q9H7E2 651 aaKnown RBP25.3■■□□□ 1.64
RAB28-201ENST00000288723 ZBTB40Q9NUA8 1239 aa25.3■■□□□ 1.64
RAB28-201ENST00000288723 MOB2Q70IA6 237 aa25.29■■□□□ 1.64
RAB28-201ENST00000288723 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.29■■□□□ 1.64
RAB28-201ENST00000288723 DEFB129Q9H1M3 183 aa25.29■■□□□ 1.64
RAB28-201ENST00000288723 HSPA1AP0DMV8 641 aaKnown RBP25.28■■□□□ 1.64
RAB28-201ENST00000288723 HSPA1BP0DMV9 641 aaKnown RBP25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms