RNA–Protein interactions for RNA: ENST00000287936.8

HMGCR-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCR, Length 4,585 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-201ENST00000287936 GPAA1O43292 621 aa11.65□□□□□ -0.54
HMGCR-201ENST00000287936 PPFIA3O75145 1194 aa11.65□□□□□ -0.54
HMGCR-201ENST00000287936 RFX5P48382 616 aaPredicted RBP11.65□□□□□ -0.54
HMGCR-201ENST00000287936 PTPN14Q15678 1187 aa11.65□□□□□ -0.54
HMGCR-201ENST00000287936 KRT23Q9C075 422 aa11.65□□□□□ -0.54
HMGCR-201ENST00000287936 PAXBP1Q9Y5B6 917 aa11.65□□□□□ -0.54
HMGCR-201ENST00000287936 TPM1P09493 284 aa11.65□□□□□ -0.54
HMGCR-201ENST00000287936 NR1I2O75469 434 aa11.65□□□□□ -0.55
HMGCR-201ENST00000287936 ITGA6P23229 1130 aa11.65□□□□□ -0.55
HMGCR-201ENST00000287936 SFPQP23246 707 aaKnown RBP eCLIP11.65□□□□□ -0.55
HMGCR-201ENST00000287936 ZBTB38Q8NAP3 1195 aaPredicted RBP11.65□□□□□ -0.55
HMGCR-201ENST00000287936 UBE2Q2Q8WVN8 375 aa11.65□□□□□ -0.55
HMGCR-201ENST00000287936 MICU3Q86XE3 530 aa11.64□□□□□ -0.55
HMGCR-201ENST00000287936 DNAJC10Q8IXB1 793 aa11.64□□□□□ -0.55
HMGCR-201ENST00000287936 ZNF652Q9Y2D9 606 aa11.64□□□□□ -0.55
HMGCR-201ENST00000287936 SLIT3O75094 1523 aa11.64□□□□□ -0.55
HMGCR-201ENST00000287936 ZAP70P43403 619 aa11.64□□□□□ -0.55
HMGCR-201ENST00000287936 AMOTL1Q8IY63 956 aa11.64□□□□□ -0.55
HMGCR-201ENST00000287936 PDCL2Q8N4E4 241 aa11.64□□□□□ -0.55
HMGCR-201ENST00000287936 CCDC150Q8NCX0 1101 aa11.64□□□□□ -0.55
HMGCR-201ENST00000287936 TDRD7Q8NHU6 1098 aaKnown RBP11.64□□□□□ -0.55
HMGCR-201ENST00000287936 TMEM87BQ96K49 555 aa11.64□□□□□ -0.55
HMGCR-201ENST00000287936 C16orf45Q96MC5 204 aaPredicted RBP11.64□□□□□ -0.55
HMGCR-201ENST00000287936 YEATS4O95619 227 aa11.64□□□□□ -0.55
HMGCR-201ENST00000287936 PDIA3P30101 505 aaKnown RBP11.64□□□□□ -0.55
HMGCR-201ENST00000287936 RAB11FIP4Q86YS3 637 aa11.64□□□□□ -0.55
HMGCR-201ENST00000287936 KIF1AQ12756 1690 aa11.64□□□□□ -0.55
HMGCR-201ENST00000287936 KDM6AO15550 1401 aaPredicted RBP11.64□□□□□ -0.55
HMGCR-201ENST00000287936 MFSD6Q6ZSS7 791 aa11.64□□□□□ -0.55
HMGCR-201ENST00000287936 AOPEPQ8N6M6 819 aa11.64□□□□□ -0.55
HMGCR-201ENST00000287936 NUP133Q8WUM0 1156 aa11.64□□□□□ -0.55
HMGCR-201ENST00000287936 RCOR1Q9UKL0 485 aa11.64□□□□□ -0.55
HMGCR-201ENST00000287936 PDE8AO60658 829 aa11.63□□□□□ -0.55
HMGCR-201ENST00000287936 SYKP43405 635 aa11.63□□□□□ -0.55
HMGCR-201ENST00000287936 FOXO4P98177 505 aa11.63□□□□□ -0.55
HMGCR-201ENST00000287936 ANKRD20A12PQ8NF67 263 aa11.63□□□□□ -0.55
HMGCR-201ENST00000287936 ANGEL1Q9UNK9 670 aaKnown RBP11.63□□□□□ -0.55
HMGCR-201ENST00000287936 GNAT2P19087 354 aa11.63□□□□□ -0.55
HMGCR-201ENST00000287936 DZIP3Q86Y13 1208 aaKnown RBP11.63□□□□□ -0.55
HMGCR-201ENST00000287936 RASSF8Q8NHQ8 419 aa11.63□□□□□ -0.55
HMGCR-201ENST00000287936 USP28Q96RU2 1077 aa11.63□□□□□ -0.55
HMGCR-201ENST00000287936 RAI14Q9P0K7 980 aa11.63□□□□□ -0.55
HMGCR-201ENST00000287936 COL15A1P39059 1388 aa11.63□□□□□ -0.55
HMGCR-201ENST00000287936 ZNF609O15014 1411 aa11.63□□□□□ -0.55
HMGCR-201ENST00000287936 TMTC2Q8N394 836 aa11.63□□□□□ -0.55
HMGCR-201ENST00000287936 PUS3Q9BZE2 481 aaKnown RBP11.63□□□□□ -0.55
HMGCR-201ENST00000287936 CCDC152Q4G0S7 254 aa11.62□□□□□ -0.55
HMGCR-201ENST00000287936 ADALQ6DHV7 355 aa11.62□□□□□ -0.55
HMGCR-201ENST00000287936 PUM3Q15397 648 aaKnown RBP11.62□□□□□ -0.55
HMGCR-201ENST00000287936 KIF18AQ8NI77 898 aa11.62□□□□□ -0.55
HMGCR-201ENST00000287936 SMARCC2Q8TAQ2 1214 aa11.62□□□□□ -0.55
HMGCR-201ENST00000287936 NOL10Q9BSC4 688 aaKnown RBP11.62□□□□□ -0.55
HMGCR-201ENST00000287936 MAP3K15Q6ZN16 1313 aa11.62□□□□□ -0.55
HMGCR-201ENST00000287936 DCCP43146 1447 aa11.62□□□□□ -0.55
HMGCR-201ENST00000287936 ATP2B1P20020 1258 aa11.62□□□□□ -0.55
HMGCR-201ENST00000287936 ANO1Q5XXA6 986 aa11.62□□□□□ -0.55
HMGCR-201ENST00000287936 MEGF6O75095 1541 aa11.62□□□□□ -0.55
HMGCR-201ENST00000287936 CCDC102BQ68D86 513 aa11.62□□□□□ -0.55
HMGCR-201ENST00000287936 TTLL5Q6EMB2 1281 aa11.62□□□□□ -0.55
HMGCR-201ENST00000287936 CNNM3Q8NE01 707 aa11.62□□□□□ -0.55
HMGCR-201ENST00000287936 SLC26A6Q9BXS9 759 aa11.62□□□□□ -0.55
HMGCR-201ENST00000287936 SLAIN2Q9P270 581 aa11.62□□□□□ -0.55
HMGCR-201ENST00000287936 NBPF26B4DH59 902 aa11.61□□□□□ -0.55
HMGCR-201ENST00000287936 M0R2C6 588 aa11.61□□□□□ -0.55
HMGCR-201ENST00000287936 SKILP12757 684 aa11.61□□□□□ -0.55
HMGCR-201ENST00000287936 NBPF14Q5TI25 921 aa11.61□□□□□ -0.55
HMGCR-201ENST00000287936 NBPF10Q6P3W6 841 aaKnown RBP11.61□□□□□ -0.55
HMGCR-201ENST00000287936 NBPF15Q8N660 670 aa11.61□□□□□ -0.55
HMGCR-201ENST00000287936 MNS1Q8NEH6 495 aa11.61□□□□□ -0.55
HMGCR-201ENST00000287936 CDC5LQ99459 802 aaKnown RBP11.61□□□□□ -0.55
HMGCR-201ENST00000287936 CARMIL3Q8ND23 1372 aa11.61□□□□□ -0.55
HMGCR-201ENST00000287936 ABCC12Q96J65 1359 aa11.61□□□□□ -0.55
HMGCR-201ENST00000287936 LMO7Q8WWI1 1683 aa11.61□□□□□ -0.55
HMGCR-201ENST00000287936 A0A1W2PQ27 194 aa11.61□□□□□ -0.55
HMGCR-201ENST00000287936 A0A1W2PQ64 194 aa11.61□□□□□ -0.55
HMGCR-201ENST00000287936 A0A1W2PQD8 194 aa11.61□□□□□ -0.55
HMGCR-201ENST00000287936 CTSWP56202 376 aa11.61□□□□□ -0.55
HMGCR-201ENST00000287936 ATG9AQ7Z3C6 839 aa11.61□□□□□ -0.55
HMGCR-201ENST00000287936 MED1Q15648 1581 aaPredicted RBP11.61□□□□□ -0.55
HMGCR-201ENST00000287936 A0A1B0GVL5 298 aa11.61□□□□□ -0.55
HMGCR-201ENST00000287936 BIN1O00499 593 aa11.61□□□□□ -0.55
HMGCR-201ENST00000287936 FGAP02671 866 aa11.61□□□□□ -0.55
HMGCR-201ENST00000287936 CDC25BP30305 580 aa11.61□□□□□ -0.55
HMGCR-201ENST00000287936 HSPA2P54652 639 aa11.61□□□□□ -0.55
HMGCR-201ENST00000287936 WTAPQ15007 396 aa11.61□□□□□ -0.55
HMGCR-201ENST00000287936 CFAP100Q494V2 611 aa11.61□□□□□ -0.55
HMGCR-201ENST00000287936 CEP135Q66GS9 1140 aa11.61□□□□□ -0.55
HMGCR-201ENST00000287936 GIGYF2Q6Y7W6 1299 aaKnown RBP11.61□□□□□ -0.55
HMGCR-201ENST00000287936 TMC6Q7Z403 805 aa11.61□□□□□ -0.55
HMGCR-201ENST00000287936 LPIN2Q92539 896 aa11.61□□□□□ -0.55
HMGCR-201ENST00000287936 ARGLU1Q9NWB6 273 aaPredicted RBP11.61□□□□□ -0.55
HMGCR-201ENST00000287936 RTEL1Q9NZ71 1219 aa11.61□□□□□ -0.55
HMGCR-201ENST00000287936 MROH5Q6ZUA9 1318 aa11.61□□□□□ -0.55
HMGCR-201ENST00000287936 PDILTQ8N807 584 aa11.6□□□□□ -0.55
HMGCR-201ENST00000287936 UTP14AQ9BVJ6 771 aaKnown RBP11.6□□□□□ -0.55
HMGCR-201ENST00000287936 ADORA1P30542 326 aa11.6□□□□□ -0.55
HMGCR-201ENST00000287936 MYSM1Q5VVJ2 828 aa11.6□□□□□ -0.55
HMGCR-201ENST00000287936 C17orf53Q8N3J3 647 aaPredicted RBP11.6□□□□□ -0.55
HMGCR-201ENST00000287936 ISCA1Q9BUE6 129 aa11.6□□□□□ -0.55
HMGCR-201ENST00000287936 RTN1Q16799 776 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms