RNA–Protein interactions for RNA: ENST00000263351.9

ZNF541-201, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-201ENST00000263351 KLF18A0A0U1RQI7 1052 aa19.3■□□□□ 0.68
ZNF541-201ENST00000263351 KMT5BQ4FZB7 885 aa19.3■□□□□ 0.68
ZNF541-201ENST00000263351 PLBD2Q8NHP8 589 aa19.3■□□□□ 0.68
ZNF541-201ENST00000263351 HPS5Q9UPZ3 1129 aa19.3■□□□□ 0.68
ZNF541-201ENST00000263351 SCN11AQ9UI33 1791 aa19.3■□□□□ 0.68
ZNF541-201ENST00000263351 OVOS2A0A0G2JMS6 1433 aa19.3■□□□□ 0.68
ZNF541-201ENST00000263351 RNF113AO15541 343 aaKnown RBP19.3■□□□□ 0.68
ZNF541-201ENST00000263351 ANTXR2P58335 489 aa19.3■□□□□ 0.68
ZNF541-201ENST00000263351 PTPN14Q15678 1187 aa19.3■□□□□ 0.68
ZNF541-201ENST00000263351 ARMCX5Q6P1M9 558 aa19.3■□□□□ 0.68
ZNF541-201ENST00000263351 TMC6Q7Z403 805 aa19.3■□□□□ 0.68
ZNF541-201ENST00000263351 PROSER2Q86WR7 435 aaPredicted RBP19.3■□□□□ 0.68
ZNF541-201ENST00000263351 MRFAP1L1Q96HT8 127 aa19.3■□□□□ 0.68
ZNF541-201ENST00000263351 GOLGA8BA8MQT2 603 aa19.29■□□□□ 0.68
ZNF541-201ENST00000263351 H7C1W4 665 aa19.29■□□□□ 0.68
ZNF541-201ENST00000263351 FGAP02671 866 aa19.29■□□□□ 0.68
ZNF541-201ENST00000263351 LMOD1P29536 600 aaPredicted RBP19.29■□□□□ 0.68
ZNF541-201ENST00000263351 STK38Q15208 465 aa19.29■□□□□ 0.68
ZNF541-201ENST00000263351 SF3A1Q15459 793 aaKnown RBP19.29■□□□□ 0.68
ZNF541-201ENST00000263351 SARM1Q6SZW1 724 aa19.29■□□□□ 0.68
ZNF541-201ENST00000263351 NYAP1Q6ZVC0 841 aa19.29■□□□□ 0.68
ZNF541-201ENST00000263351 LINC00301Q8NCQ3 95 aa19.29■□□□□ 0.68
ZNF541-201ENST00000263351 MRPS27Q92552 414 aaKnown RBP19.29■□□□□ 0.68
ZNF541-201ENST00000263351 AGXT2Q9BYV1 514 aa19.29■□□□□ 0.68
ZNF541-201ENST00000263351 CCAR2Q8N163 923 aaKnown RBP19.29■□□□□ 0.68
ZNF541-201ENST00000263351 LLPHQ9BRT6 129 aaKnown RBP19.29■□□□□ 0.68
ZNF541-201ENST00000263351 DSCC1Q9BVC3 393 aa19.29■□□□□ 0.68
ZNF541-201ENST00000263351 PHRF1Q9P1Y6 1649 aaKnown RBP19.29■□□□□ 0.68
ZNF541-201ENST00000263351 WDHD1O75717 1129 aaPredicted RBP19.28■□□□□ 0.68
ZNF541-201ENST00000263351 ZAP70P43403 619 aa19.28■□□□□ 0.68
ZNF541-201ENST00000263351 MYL10Q9BUA6 226 aa19.28■□□□□ 0.68
ZNF541-201ENST00000263351 ANO10Q9NW15 660 aa19.28■□□□□ 0.68
ZNF541-201ENST00000263351 PRC1O43663 620 aa19.28■□□□□ 0.68
ZNF541-201ENST00000263351 E4F1Q66K89 784 aaPredicted RBP19.28■□□□□ 0.68
ZNF541-201ENST00000263351 CEP57L1Q8IYX8 460 aa19.28■□□□□ 0.68
ZNF541-201ENST00000263351 DPF2Q92785 391 aa19.28■□□□□ 0.68
ZNF541-201ENST00000263351 HELLSQ9NRZ9 838 aa19.28■□□□□ 0.68
ZNF541-201ENST00000263351 ORC3Q9UBD5 711 aaPredicted RBP19.28■□□□□ 0.68
ZNF541-201ENST00000263351 EYA2O00167 538 aa19.27■□□□□ 0.68
ZNF541-201ENST00000263351 CDC25BP30305 580 aa19.27■□□□□ 0.68
ZNF541-201ENST00000263351 ZBTB9Q96C00 473 aa19.27■□□□□ 0.68
ZNF541-201ENST00000263351 FAM89AQ96GI7 184 aa19.27■□□□□ 0.68
ZNF541-201ENST00000263351 C8orf76Q96K31 380 aa19.27■□□□□ 0.68
ZNF541-201ENST00000263351 RBM6P78332 1123 aaKnown RBP19.27■□□□□ 0.67
ZNF541-201ENST00000263351 SPECC1Q5M775 1068 aa19.27■□□□□ 0.67
ZNF541-201ENST00000263351 GORABQ5T7V8 394 aa19.27■□□□□ 0.67
ZNF541-201ENST00000263351 FBXO38Q6PIJ6 1188 aa19.27■□□□□ 0.67
ZNF541-201ENST00000263351 PHKBQ93100 1093 aa19.27■□□□□ 0.67
ZNF541-201ENST00000263351 ZNF396Q96N95 335 aaPredicted RBP19.27■□□□□ 0.67
ZNF541-201ENST00000263351 TMX1Q9H3N1 280 aa19.27■□□□□ 0.67
ZNF541-201ENST00000263351 CWC25Q9NXE8 425 aaPredicted RBP19.27■□□□□ 0.67
ZNF541-201ENST00000263351 NWD2Q9ULI1 1742 aa19.26■□□□□ 0.67
ZNF541-201ENST00000263351 DCAF5Q96JK2 942 aa19.26■□□□□ 0.67
ZNF541-201ENST00000263351 CLIC6Q96NY7 704 aa19.26■□□□□ 0.67
ZNF541-201ENST00000263351 KIAA1468Q9P260 1216 aa19.26■□□□□ 0.67
ZNF541-201ENST00000263351 ADAMTS7Q9UKP4 1686 aa19.26■□□□□ 0.67
ZNF541-201ENST00000263351 PDIA4P13667 645 aaKnown RBP19.25■□□□□ 0.67
ZNF541-201ENST00000263351 SYT10Q6XYQ8 523 aa19.25■□□□□ 0.67
ZNF541-201ENST00000263351 XAGE2Q96GT9 111 aa19.25■□□□□ 0.67
ZNF541-201ENST00000263351 NBPF3Q9H094 633 aa19.25■□□□□ 0.67
ZNF541-201ENST00000263351 HMGB1P09429 215 aaKnown RBP19.25■□□□□ 0.67
ZNF541-201ENST00000263351 SPTLC2O15270 562 aa19.24■□□□□ 0.67
ZNF541-201ENST00000263351 FANCGO15287 622 aa19.24■□□□□ 0.67
ZNF541-201ENST00000263351 ZNF202O95125 648 aa19.24■□□□□ 0.67
ZNF541-201ENST00000263351 PFKFB1P16118 471 aa19.24■□□□□ 0.67
ZNF541-201ENST00000263351 MYSM1Q5VVJ2 828 aa19.24■□□□□ 0.67
ZNF541-201ENST00000263351 ADALQ6DHV7 355 aa19.24■□□□□ 0.67
ZNF541-201ENST00000263351 RTEL1Q9NZ71 1219 aa19.24■□□□□ 0.67
ZNF541-201ENST00000263351 FOXN1O15353 648 aa19.24■□□□□ 0.67
ZNF541-201ENST00000263351 NCAPHQ15003 741 aa19.24■□□□□ 0.67
ZNF541-201ENST00000263351 ERCC6LQ2NKX8 1250 aa19.24■□□□□ 0.67
ZNF541-201ENST00000263351 KIF18AQ8NI77 898 aa19.24■□□□□ 0.67
ZNF541-201ENST00000263351 ZNF274Q96GC6 653 aaPredicted RBP19.24■□□□□ 0.67
ZNF541-201ENST00000263351 HSD3B7Q9H2F3 369 aa19.24■□□□□ 0.67
ZNF541-201ENST00000263351 PAXBP1Q9Y5B6 917 aa19.24■□□□□ 0.67
ZNF541-201ENST00000263351 CAMTA1Q9Y6Y1 1673 aa19.23■□□□□ 0.67
ZNF541-201ENST00000263351 SNAP23O00161 211 aa19.23■□□□□ 0.67
ZNF541-201ENST00000263351 TRHP20396 242 aaPredicted RBP19.23■□□□□ 0.67
ZNF541-201ENST00000263351 IL15P40933 162 aaPredicted RBP19.23■□□□□ 0.67
ZNF541-201ENST00000263351 TTC39AQ5SRH9 613 aa19.23■□□□□ 0.67
ZNF541-201ENST00000263351 TRPM3Q9HCF6 1732 aaPredicted RBP19.23■□□□□ 0.67
ZNF541-201ENST00000263351 TMEM232C9JQI7 657 aa19.23■□□□□ 0.67
ZNF541-201ENST00000263351 CTAGE5O15320 804 aa19.23■□□□□ 0.67
ZNF541-201ENST00000263351 PNOCQ13519 176 aa19.23■□□□□ 0.67
ZNF541-201ENST00000263351 AXDND1Q5T1B0 1012 aaPredicted RBP19.23■□□□□ 0.67
ZNF541-201ENST00000263351 MB21D2Q8IYB1 491 aaPredicted RBP19.23■□□□□ 0.67
ZNF541-201ENST00000263351 FBXO18Q8NFZ0 1043 aa19.23■□□□□ 0.67
ZNF541-201ENST00000263351 EPC1Q9H2F5 836 aa19.23■□□□□ 0.67
ZNF541-201ENST00000263351 CYB5R4Q7L1T6 521 aa19.22■□□□□ 0.67
ZNF541-201ENST00000263351 TBC1D10CQ8IV04 446 aa19.22■□□□□ 0.67
ZNF541-201ENST00000263351 PPP1R13BQ96KQ4 1090 aa19.22■□□□□ 0.67
ZNF541-201ENST00000263351 ZNF446Q9NWS9 450 aa19.22■□□□□ 0.67
ZNF541-201ENST00000263351 DDX41Q9UJV9 622 aaKnown RBP19.22■□□□□ 0.67
ZNF541-201ENST00000263351 ABCC6O95255 1503 aa19.22■□□□□ 0.67
ZNF541-201ENST00000263351 FAM177A1Q8N128 213 aaPredicted RBP19.22■□□□□ 0.67
ZNF541-201ENST00000263351 GLI3P10071 1580 aa19.22■□□□□ 0.67
ZNF541-201ENST00000263351 C1orf167Q5SNV9 1468 aa19.21■□□□□ 0.67
ZNF541-201ENST00000263351 CPLX1O14810 134 aa19.21■□□□□ 0.67
ZNF541-201ENST00000263351 SLC3A2P08195 630 aaKnown RBP19.21■□□□□ 0.67
ZNF541-201ENST00000263351 GPTP24298 496 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms