RNA–Protein interactions for RNA: ENST00000259605.10

RNF38-201, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 5,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-201ENST00000259605 DPP7Q9UHL4 492 aa4.59□□□□□ -1.67
RNF38-201ENST00000259605 ZNF215Q9UL58 517 aaPredicted RBP4.59□□□□□ -1.67
RNF38-201ENST00000259605 ZMYM3Q14202 1370 aa4.59□□□□□ -1.67
RNF38-201ENST00000259605 MACROD2A1Z1Q3 448 aa4.59□□□□□ -1.68
RNF38-201ENST00000259605 FAM13AO94988 1023 aa4.59□□□□□ -1.68
RNF38-201ENST00000259605 GCP02774 474 aa4.59□□□□□ -1.68
RNF38-201ENST00000259605 TMPOP42166 694 aaKnown RBP4.59□□□□□ -1.68
RNF38-201ENST00000259605 GOLGA8FQ08AF8 430 aa4.59□□□□□ -1.68
RNF38-201ENST00000259605 GOLGA8DPQ0D2H9 430 aa4.59□□□□□ -1.68
RNF38-201ENST00000259605 APOBEC3FQ8IUX4 373 aaKnown RBP4.59□□□□□ -1.68
RNF38-201ENST00000259605 USHBP1Q8N6Y0 703 aa4.59□□□□□ -1.68
RNF38-201ENST00000259605 CTNNBL1Q8WYA6 563 aaPredicted RBP4.59□□□□□ -1.68
RNF38-201ENST00000259605 N4BP2L2Q92802 583 aaPredicted RBP4.59□□□□□ -1.68
RNF38-201ENST00000259605 TSPYL1Q9H0U9 437 aa4.59□□□□□ -1.68
RNF38-201ENST00000259605 SLC12A5Q9H2X9 1139 aa4.59□□□□□ -1.68
RNF38-201ENST00000259605 IKBKGQ9Y6K9 419 aa4.59□□□□□ -1.68
RNF38-201ENST00000259605 HMGXB3Q12766 1538 aa4.59□□□□□ -1.68
RNF38-201ENST00000259605 ZNF518AQ6AHZ1 1483 aa4.59□□□□□ -1.68
RNF38-201ENST00000259605 RIMS2Q9UQ26 1411 aa4.59□□□□□ -1.68
RNF38-201ENST00000259605 CCDC171Q6TFL3 1326 aa4.59□□□□□ -1.68
RNF38-201ENST00000259605 MYO3BQ8WXR4 1341 aa4.59□□□□□ -1.68
RNF38-201ENST00000259605 CCDC85CA6NKD9 419 aa4.58□□□□□ -1.68
RNF38-201ENST00000259605 OPA1O60313 960 aa4.58□□□□□ -1.68
RNF38-201ENST00000259605 MYCP01106 439 aaPredicted RBP4.58□□□□□ -1.68
RNF38-201ENST00000259605 PTPREP23469 700 aa4.58□□□□□ -1.68
RNF38-201ENST00000259605 GABPAQ06546 454 aa4.58□□□□□ -1.68
RNF38-201ENST00000259605 PPP2R5DQ14738 602 aa4.58□□□□□ -1.68
RNF38-201ENST00000259605 SPA17Q15506 151 aa4.58□□□□□ -1.68
RNF38-201ENST00000259605 IFI16Q16666 785 aaKnown RBP4.58□□□□□ -1.68
RNF38-201ENST00000259605 TMCO3Q6UWJ1 677 aa4.58□□□□□ -1.68
RNF38-201ENST00000259605 GTF3C2Q8WUA4 911 aaPredicted RBP4.58□□□□□ -1.68
RNF38-201ENST00000259605 CCDC113Q9H0I3 377 aa4.58□□□□□ -1.68
RNF38-201ENST00000259605 SLITRK6Q9H5Y7 841 aa4.58□□□□□ -1.68
RNF38-201ENST00000259605 ZNF277Q9NRM2 450 aaPredicted RBP4.58□□□□□ -1.68
RNF38-201ENST00000259605 CFTRP13569 1480 aa4.58□□□□□ -1.68
RNF38-201ENST00000259605 STK10O94804 968 aaKnown RBP4.58□□□□□ -1.68
RNF38-201ENST00000259605 ME1P48163 572 aa4.58□□□□□ -1.68
RNF38-201ENST00000259605 IRAK1BP1Q5VVH5 260 aa4.58□□□□□ -1.68
RNF38-201ENST00000259605 NDUFAF2Q8N183 169 aa4.58□□□□□ -1.68
RNF38-201ENST00000259605 CCDC102AQ96A19 550 aa4.58□□□□□ -1.68
RNF38-201ENST00000259605 UIMC1Q96RL1 719 aa4.58□□□□□ -1.68
RNF38-201ENST00000259605 MFSD1Q9H3U5 465 aa4.58□□□□□ -1.68
RNF38-201ENST00000259605 MCM9Q9NXL9 1143 aa4.58□□□□□ -1.68
RNF38-201ENST00000259605 MAP3K20Q9NYL2 800 aaKnown RBP4.58□□□□□ -1.68
RNF38-201ENST00000259605 BCCIPQ9P287 314 aaKnown RBP eCLIP4.58□□□□□ -1.68
RNF38-201ENST00000259605 HACL1Q9UJ83 578 aa4.58□□□□□ -1.68
RNF38-201ENST00000259605 NUB1Q9Y5A7 615 aa4.58□□□□□ -1.68
RNF38-201ENST00000259605 DDX49Q9Y6V7 483 aaKnown RBP4.58□□□□□ -1.68
RNF38-201ENST00000259605 PPFIA3O75145 1194 aa4.58□□□□□ -1.68
RNF38-201ENST00000259605 NAPAP54920 295 aa4.58□□□□□ -1.68
RNF38-201ENST00000259605 MAPK8IP2Q13387 824 aaPredicted RBP4.58□□□□□ -1.68
RNF38-201ENST00000259605 WDR44Q5JSH3 913 aa4.58□□□□□ -1.68
RNF38-201ENST00000259605 OTUD6AQ7L8S5 288 aa4.58□□□□□ -1.68
RNF38-201ENST00000259605 CABLES1Q8TDN4 633 aa4.58□□□□□ -1.68
RNF38-201ENST00000259605 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.58□□□□□ -1.68
RNF38-201ENST00000259605 TRPC6Q9Y210 931 aa4.58□□□□□ -1.68
RNF38-201ENST00000259605 CASKIN1Q8WXD9 1431 aa4.58□□□□□ -1.68
RNF38-201ENST00000259605 GOLGA6L9A6NEM1 432 aa4.58□□□□□ -1.68
RNF38-201ENST00000259605 GIPC1O14908 333 aa4.58□□□□□ -1.68
RNF38-201ENST00000259605 PRIM1P49642 420 aaKnown RBP4.58□□□□□ -1.68
RNF38-201ENST00000259605 BPIFB4P59827 614 aa4.58□□□□□ -1.68
RNF38-201ENST00000259605 SP4Q02446 784 aa4.58□□□□□ -1.68
RNF38-201ENST00000259605 CCDC15Q0P6D6 951 aa4.58□□□□□ -1.68
RNF38-201ENST00000259605 DPYDQ12882 1025 aa4.58□□□□□ -1.68
RNF38-201ENST00000259605 TFDP1Q14186 410 aa4.58□□□□□ -1.68
RNF38-201ENST00000259605 TEX35Q5T0J7 233 aa4.58□□□□□ -1.68
RNF38-201ENST00000259605 IFIT1BQ5T764 474 aaKnown RBP4.58□□□□□ -1.68
RNF38-201ENST00000259605 ZNF830Q96NB3 372 aaPredicted RBP4.58□□□□□ -1.68
RNF38-201ENST00000259605 EDEM3Q9BZQ6 932 aa4.58□□□□□ -1.68
RNF38-201ENST00000259605 SLC7A5P2Q9GIP4 190 aa4.58□□□□□ -1.68
RNF38-201ENST00000259605 MIS12Q9H081 205 aa4.58□□□□□ -1.68
RNF38-201ENST00000259605 AAASQ9NRG9 546 aa4.58□□□□□ -1.68
RNF38-201ENST00000259605 NRBP2Q9NSY0 501 aa4.58□□□□□ -1.68
RNF38-201ENST00000259605 RTL9Q8NET4 1388 aa4.58□□□□□ -1.68
RNF38-201ENST00000259605 ABCC11Q96J66 1382 aa4.58□□□□□ -1.68
RNF38-201ENST00000259605 PIK3R4Q99570 1358 aa4.58□□□□□ -1.68
RNF38-201ENST00000259605 KIF21BO75037 1637 aa4.57□□□□□ -1.68
RNF38-201ENST00000259605 NESP48681 1621 aa4.57□□□□□ -1.68
RNF38-201ENST00000259605 SOCS7O14512 581 aa4.57□□□□□ -1.68
RNF38-201ENST00000259605 ZW10O43264 779 aa4.57□□□□□ -1.68
RNF38-201ENST00000259605 SERPINC1P01008 464 aa4.57□□□□□ -1.68
RNF38-201ENST00000259605 TFRCP02786 760 aaKnown RBP4.57□□□□□ -1.68
RNF38-201ENST00000259605 AMPD2Q01433 879 aa4.57□□□□□ -1.68
RNF38-201ENST00000259605 BIRC3Q13489 604 aa4.57□□□□□ -1.68
RNF38-201ENST00000259605 TMEM67Q5HYA8 995 aa4.57□□□□□ -1.68
RNF38-201ENST00000259605 SLC27A3Q5K4L6 730 aa4.57□□□□□ -1.68
RNF38-201ENST00000259605 UBE3BQ7Z3V4 1068 aa4.57□□□□□ -1.68
RNF38-201ENST00000259605 ATRIPQ8WXE1 791 aa4.57□□□□□ -1.68
RNF38-201ENST00000259605 CCT6BQ92526 530 aa4.57□□□□□ -1.68
RNF38-201ENST00000259605 CFAP36Q96G28 342 aa4.57□□□□□ -1.68
RNF38-201ENST00000259605 FSD2A1L4K1 749 aa4.57□□□□□ -1.68
RNF38-201ENST00000259605 NNMTP40261 264 aa4.57□□□□□ -1.68
RNF38-201ENST00000259605 KRT79Q5XKE5 535 aa4.57□□□□□ -1.68
RNF38-201ENST00000259605 CC2D1AQ6P1N0 951 aaPredicted RBP4.57□□□□□ -1.68
RNF38-201ENST00000259605 HAUS6Q7Z4H7 955 aa4.57□□□□□ -1.68
RNF38-201ENST00000259605 WDR63Q8IWG1 891 aa4.57□□□□□ -1.68
RNF38-201ENST00000259605 SKA1Q96BD8 255 aa4.57□□□□□ -1.68
RNF38-201ENST00000259605 INCENPQ9NQS7 918 aa4.57□□□□□ -1.68
RNF38-201ENST00000259605 FAM114A2Q9NRY5 505 aa4.57□□□□□ -1.68
RNF38-201ENST00000259605 TXNDC16Q9P2K2 825 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms