RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 CREBZFQ9NS37 354 aa30.18■■■□□ 2.42
SDF2L1-201ENST00000248958 AKAP2Q9Y2D5 859 aa30.18■■■□□ 2.42
SDF2L1-201ENST00000248958 TRPM7Q96QT4 1865 aa30.18■■■□□ 2.42
SDF2L1-201ENST00000248958 EGFRP00533 1210 aa30.17■■■□□ 2.42
SDF2L1-201ENST00000248958 C1orf115Q9H7X2 142 aa30.17■■■□□ 2.42
SDF2L1-201ENST00000248958 COG6Q9Y2V7 657 aa30.17■■■□□ 2.42
SDF2L1-201ENST00000248958 FRAT2O75474 233 aaPredicted RBP30.16■■■□□ 2.42
SDF2L1-201ENST00000248958 KIAA0825Q8IV33 1275 aa30.16■■■□□ 2.42
SDF2L1-201ENST00000248958 DCPSQ96C86 337 aaKnown RBP30.16■■■□□ 2.42
SDF2L1-201ENST00000248958 TMEM88BA6NKF7 163 aa30.15■■■□□ 2.42
SDF2L1-201ENST00000248958 BCAMP50895 628 aa30.15■■■□□ 2.42
SDF2L1-201ENST00000248958 MYH13Q9UKX3 1938 aa30.15■■■□□ 2.42
SDF2L1-201ENST00000248958 ARAP2Q8WZ64 1704 aa30.15■■■□□ 2.42
SDF2L1-201ENST00000248958 POLR2AP24928 1970 aaKnown RBP30.14■■■□□ 2.42
SDF2L1-201ENST00000248958 CERS5Q8N5B7 392 aa30.14■■■□□ 2.42
SDF2L1-201ENST00000248958 TBC1D22AQ8WUA7 517 aa30.14■■■□□ 2.42
SDF2L1-201ENST00000248958 SCARF1Q14162 830 aa30.13■■■□□ 2.41
SDF2L1-201ENST00000248958 TFCP2Q12800 502 aa30.12■■■□□ 2.41
SDF2L1-201ENST00000248958 MFSD14BQ5SR56 506 aa30.12■■■□□ 2.41
SDF2L1-201ENST00000248958 IFFO2Q5TF58 517 aa30.12■■■□□ 2.41
SDF2L1-201ENST00000248958 CEP85Q6P2H3 762 aa30.12■■■□□ 2.41
SDF2L1-201ENST00000248958 GLIS2Q9BZE0 524 aaPredicted RBP30.12■■■□□ 2.41
SDF2L1-201ENST00000248958 GNL3LQ9NVN8 582 aaKnown RBP30.12■■■□□ 2.41
SDF2L1-201ENST00000248958 PITPNM2Q9BZ72 1349 aa30.12■■■□□ 2.41
SDF2L1-201ENST00000248958 ZBTB22O15209 634 aa30.11■■■□□ 2.41
SDF2L1-201ENST00000248958 HTRA3P83110 453 aa30.11■■■□□ 2.41
SDF2L1-201ENST00000248958 GGA3Q9NZ52 723 aa30.11■■■□□ 2.41
SDF2L1-201ENST00000248958 KRT26Q7Z3Y9 468 aa30.1■■■□□ 2.41
SDF2L1-201ENST00000248958 DNAJC5GQ8N7S2 189 aa30.1■■■□□ 2.41
SDF2L1-201ENST00000248958 ZBTB40Q9NUA8 1239 aa30.1■■■□□ 2.41
SDF2L1-201ENST00000248958 JAG2Q9Y219 1238 aa30.1■■■□□ 2.41
SDF2L1-201ENST00000248958 NOP58Q9Y2X3 529 aaKnown RBP30.1■■■□□ 2.41
SDF2L1-201ENST00000248958 SURF6O75683 361 aaKnown RBP30.09■■■□□ 2.41
SDF2L1-201ENST00000248958 SULF1Q8IWU6 871 aa30.09■■■□□ 2.41
SDF2L1-201ENST00000248958 RPAP2Q8IXW5 612 aaPredicted RBP30.09■■■□□ 2.41
SDF2L1-201ENST00000248958 MTMR14Q8NCE2 650 aa30.09■■■□□ 2.41
SDF2L1-201ENST00000248958 IQSEC3Q9UPP2 1182 aaPredicted RBP30.09■■■□□ 2.41
SDF2L1-201ENST00000248958 A0A1B0GUL7 405 aa30.08■■■□□ 2.41
SDF2L1-201ENST00000248958 TRAF5O00463 557 aa30.08■■■□□ 2.41
SDF2L1-201ENST00000248958 WNT10BO00744 389 aa30.08■■■□□ 2.41
SDF2L1-201ENST00000248958 SEMA3EO15041 775 aa30.08■■■□□ 2.41
SDF2L1-201ENST00000248958 OS9Q13438 667 aaPredicted RBP30.08■■■□□ 2.41
SDF2L1-201ENST00000248958 ANGEL2Q5VTE6 544 aaKnown RBP30.08■■■□□ 2.41
SDF2L1-201ENST00000248958 USP48Q86UV5 1035 aa30.08■■■□□ 2.41
SDF2L1-201ENST00000248958 KLRG1Q96E93 195 aa30.08■■■□□ 2.41
SDF2L1-201ENST00000248958 CHAF1AQ13111 956 aaPredicted RBP30.07■■■□□ 2.4
SDF2L1-201ENST00000248958 DLGAP5Q15398 846 aa30.07■■■□□ 2.4
SDF2L1-201ENST00000248958 SUGT1Q9Y2Z0 365 aa30.07■■■□□ 2.4
SDF2L1-201ENST00000248958 ECM29Q5VYK3 1845 aa30.07■■■□□ 2.4
SDF2L1-201ENST00000248958 F8W031 263 aaPredicted RBP30.06■■■□□ 2.4
SDF2L1-201ENST00000248958 TIMM10P62072 90 aa30.06■■■□□ 2.4
SDF2L1-201ENST00000248958 NBPF9Q3BBW0 867 aa30.06■■■□□ 2.4
SDF2L1-201ENST00000248958 C20orf194Q5TEA3 1177 aa30.06■■■□□ 2.4
SDF2L1-201ENST00000248958 WDR66Q8TBY9 1149 aa30.06■■■□□ 2.4
SDF2L1-201ENST00000248958 ZBED3Q96IU2 234 aaPredicted RBP30.06■■■□□ 2.4
SDF2L1-201ENST00000248958 GPR108Q9NPR9 543 aa30.06■■■□□ 2.4
SDF2L1-201ENST00000248958 HMMRO75330 724 aa30.05■■■□□ 2.4
SDF2L1-201ENST00000248958 DENND2AQ9ULE3 1009 aa30.05■■■□□ 2.4
SDF2L1-201ENST00000248958 TTF2Q9UNY4 1162 aaKnown RBP30.05■■■□□ 2.4
SDF2L1-201ENST00000248958 ASTN2O75129 1339 aaPredicted RBP30.04■■■□□ 2.4
SDF2L1-201ENST00000248958 CCDC102BQ68D86 513 aa30.04■■■□□ 2.4
SDF2L1-201ENST00000248958 XAGE2Q96GT9 111 aa30.04■■■□□ 2.4
SDF2L1-201ENST00000248958 NEUROD6Q96NK8 337 aa30.04■■■□□ 2.4
SDF2L1-201ENST00000248958 SERPINA10Q9UK55 444 aa30.04■■■□□ 2.4
SDF2L1-201ENST00000248958 MYO1BO43795 1136 aa30.03■■■□□ 2.4
SDF2L1-201ENST00000248958 CELF2O95319 508 aaKnown RBP30.03■■■□□ 2.4
SDF2L1-201ENST00000248958 FMR1Q06787 632 aaKnown RBP eCLIP30.03■■■□□ 2.41e-8■□□□□ 10
SDF2L1-201ENST00000248958 CFAP100Q494V2 611 aa30.03■■■□□ 2.4
SDF2L1-201ENST00000248958 HSP90AB4PQ58FF6 505 aa30.03■■■□□ 2.4
SDF2L1-201ENST00000248958 CST9Q5W186 159 aa30.03■■■□□ 2.4
SDF2L1-201ENST00000248958 MAST3O60307 1309 aa30.02■■■□□ 2.4
SDF2L1-201ENST00000248958 ADORA1P30542 326 aa30.02■■■□□ 2.4
SDF2L1-201ENST00000248958 PHKA1P46020 1223 aa30.02■■■□□ 2.4
SDF2L1-201ENST00000248958 HDLBPQ00341 1268 aaKnown RBP30.02■■■□□ 2.4
SDF2L1-201ENST00000248958 ADM5C9JUS6 153 aa30.01■■■□□ 2.39
SDF2L1-201ENST00000248958 RRP1P56182 461 aaKnown RBP30.01■■■□□ 2.39
SDF2L1-201ENST00000248958 ERC1Q8IUD2 1116 aa30.01■■■□□ 2.39
SDF2L1-201ENST00000248958 APOBEC3FQ8IUX4 373 aaKnown RBP30.01■■■□□ 2.39
SDF2L1-201ENST00000248958 MRIQ9BWK5 157 aa30.01■■■□□ 2.39
SDF2L1-201ENST00000248958 ABT1Q9ULW3 272 aaKnown RBP30.01■■■□□ 2.39
SDF2L1-201ENST00000248958 RBM5P52756 815 aaKnown RBP eCLIP30■■■□□ 2.39
SDF2L1-201ENST00000248958 GORABQ5T7V8 394 aa30■■■□□ 2.39
SDF2L1-201ENST00000248958 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP30■■■□□ 2.39
SDF2L1-201ENST00000248958 CNTNAP1P78357 1384 aa30■■■□□ 2.39
SDF2L1-201ENST00000248958 PDS5AQ29RF7 1337 aaKnown RBP29.99■■■□□ 2.39
SDF2L1-201ENST00000248958 SALL1Q9NSC2 1324 aa29.99■■■□□ 2.39
SDF2L1-201ENST00000248958 SPDYE2BA6NHP3 402 aa29.99■■■□□ 2.39
SDF2L1-201ENST00000248958 RASSF10A6NK89 507 aa29.99■■■□□ 2.39
SDF2L1-201ENST00000248958 SPDYE6P0CI01 402 aa29.99■■■□□ 2.39
SDF2L1-201ENST00000248958 TNNI3KQ59H18 835 aa29.99■■■□□ 2.39
SDF2L1-201ENST00000248958 ZGPATQ8N5A5 531 aaKnown RBP29.99■■■□□ 2.39
SDF2L1-201ENST00000248958 ZNF408Q9H9D4 720 aa29.99■■■□□ 2.39
SDF2L1-201ENST00000248958 FPGT-TNNI3KV9GXZ4 949 aa29.99■■■□□ 2.39
SDF2L1-201ENST00000248958 DEFB115Q30KQ5 88 aa29.98■■■□□ 2.39
SDF2L1-201ENST00000248958 TLL2Q9Y6L7 1015 aa29.98■■■□□ 2.39
SDF2L1-201ENST00000248958 CRKP46108 304 aa29.97■■■□□ 2.39
SDF2L1-201ENST00000248958 MKRN1Q9UHC7 482 aaKnown RBP29.97■■■□□ 2.39
SDF2L1-201ENST00000248958 COL1A1P02452 1464 aaPredicted RBP29.97■■■□□ 2.39
SDF2L1-201ENST00000248958 JMYQ8N9B5 988 aa29.96■■■□□ 2.39
SDF2L1-201ENST00000248958 TEKT1Q969V4 418 aa29.96■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms