RNA–Protein interactions for RNA: ENST00000243662.10

RAB38-201, Transcript of RAB38, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB38, Length 1,465 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38-201ENST00000243662 DBNDD2Q9BQY9 259 aa19.12■□□□□ 0.65
RAB38-201ENST00000243662 DBNLQ9UJU6 430 aaKnown RBP19.12■□□□□ 0.65
RAB38-201ENST00000243662 IQSEC3Q9UPP2 1182 aaPredicted RBP19.12■□□□□ 0.65
RAB38-201ENST00000243662 APBB1O00213 710 aa19.11■□□□□ 0.65
RAB38-201ENST00000243662 RPS12P25398 132 aaKnown RBP19.11■□□□□ 0.65
RAB38-201ENST00000243662 FKBP1AP62942 108 aaKnown RBP19.11■□□□□ 0.65
RAB38-201ENST00000243662 AGBL3Q8NEM8 1001 aa19.11■□□□□ 0.65
RAB38-201ENST00000243662 LRRCC1Q9C099 1032 aa19.11■□□□□ 0.65
RAB38-201ENST00000243662 RRAGCQ9HB90 399 aa19.11■□□□□ 0.65
RAB38-201ENST00000243662 GPRC5DQ9NZD1 345 aa19.11■□□□□ 0.65
RAB38-201ENST00000243662 ADAMTSL1Q8N6G6 1762 aa19.11■□□□□ 0.65
RAB38-201ENST00000243662 IGHDP01880 384 aa19.1■□□□□ 0.65
RAB38-201ENST00000243662 VEGFAP15692 232 aaPredicted RBP19.1■□□□□ 0.65
RAB38-201ENST00000243662 ANP32AP39687 249 aaKnown RBP19.1■□□□□ 0.65
RAB38-201ENST00000243662 MXD3Q9BW11 206 aa19.1■□□□□ 0.65
RAB38-201ENST00000243662 TLR7Q9NYK1 1049 aaKnown RBP19.1■□□□□ 0.65
RAB38-201ENST00000243662 MYO3BQ8WXR4 1341 aa19.1■□□□□ 0.65
RAB38-201ENST00000243662 KIF3CO14782 793 aa19.09■□□□□ 0.65
RAB38-201ENST00000243662 SEMA3EO15041 775 aa19.09■□□□□ 0.65
RAB38-201ENST00000243662 ARID4AP29374 1257 aaPredicted RBP19.09■□□□□ 0.65
RAB38-201ENST00000243662 CLASRPQ8N2M8 674 aaKnown RBP19.09■□□□□ 0.65
RAB38-201ENST00000243662 CERS5Q8N5B7 392 aa19.09■□□□□ 0.65
RAB38-201ENST00000243662 CCDC8Q9H0W5 538 aaPredicted RBP19.09■□□□□ 0.65
RAB38-201ENST00000243662 IQCA1LA6NCM1 817 aa19.09■□□□□ 0.65
RAB38-201ENST00000243662 EPS15P42566 896 aa19.09■□□□□ 0.65
RAB38-201ENST00000243662 AACSQ86V21 672 aa19.09■□□□□ 0.65
RAB38-201ENST00000243662 SMC5Q8IY18 1101 aa19.09■□□□□ 0.65
RAB38-201ENST00000243662 GCC1Q96CN9 775 aa19.09■□□□□ 0.65
RAB38-201ENST00000243662 RWDD1Q9H446 243 aaPredicted RBP19.09■□□□□ 0.65
RAB38-201ENST00000243662 GNL3LQ9NVN8 582 aaKnown RBP19.09■□□□□ 0.65
RAB38-201ENST00000243662 HACL1Q9UJ83 578 aa19.09■□□□□ 0.65
RAB38-201ENST00000243662 PDS5AQ29RF7 1337 aaKnown RBP19.08■□□□□ 0.65
RAB38-201ENST00000243662 SHTN1A0MZ66 631 aa19.08■□□□□ 0.64
RAB38-201ENST00000243662 SMARCA5O60264 1052 aaPredicted RBP19.08■□□□□ 0.64
RAB38-201ENST00000243662 RASGRF1Q13972 1273 aa19.08■□□□□ 0.64
RAB38-201ENST00000243662 FBXW7Q969H0 707 aa19.08■□□□□ 0.64
RAB38-201ENST00000243662 ZNF512BQ96KM6 892 aaPredicted RBP19.08■□□□□ 0.64
RAB38-201ENST00000243662 BACH2Q9BYV9 841 aa19.08■□□□□ 0.64
RAB38-201ENST00000243662 TAF1DQ9H5J8 278 aaPredicted RBP19.08■□□□□ 0.64
RAB38-201ENST00000243662 CNOT7Q9UIV1 285 aaKnown RBP19.08■□□□□ 0.64
RAB38-201ENST00000243662 JAG2Q9Y219 1238 aa19.08■□□□□ 0.64
RAB38-201ENST00000243662 MYO5AQ9Y4I1 1855 aaKnown RBP19.07■□□□□ 0.64
RAB38-201ENST00000243662 PDE4AP27815 886 aa19.07■□□□□ 0.64
RAB38-201ENST00000243662 GORABQ5T7V8 394 aa19.07■□□□□ 0.64
RAB38-201ENST00000243662 DENND2AQ9ULE3 1009 aa19.07■□□□□ 0.64
RAB38-201ENST00000243662 FRAT2O75474 233 aaPredicted RBP19.06■□□□□ 0.64
RAB38-201ENST00000243662 LMOD1P29536 600 aaPredicted RBP19.06■□□□□ 0.64
RAB38-201ENST00000243662 EPHX2P34913 555 aa19.06■□□□□ 0.64
RAB38-201ENST00000243662 ZNF280AP59817 542 aaPredicted RBP19.06■□□□□ 0.64
RAB38-201ENST00000243662 CHAF1AQ13111 956 aaPredicted RBP19.06■□□□□ 0.64
RAB38-201ENST00000243662 SCARF1Q14162 830 aa19.06■□□□□ 0.64
RAB38-201ENST00000243662 MFSD14BQ5SR56 506 aa19.06■□□□□ 0.64
RAB38-201ENST00000243662 ERICH6Q7L0X2 663 aa19.06■□□□□ 0.64
RAB38-201ENST00000243662 MICALL2Q8IY33 904 aa19.06■□□□□ 0.64
RAB38-201ENST00000243662 UQCRFS1P1P0C7P4 283 aa19.05■□□□□ 0.64
RAB38-201ENST00000243662 MCAMP43121 646 aa19.05■□□□□ 0.64
RAB38-201ENST00000243662 CCDC158Q5M9N0 1113 aa19.05■□□□□ 0.64
RAB38-201ENST00000243662 TBC1D22AQ8WUA7 517 aa19.05■□□□□ 0.64
RAB38-201ENST00000243662 HMG20BQ9P0W2 317 aa19.05■□□□□ 0.64
RAB38-201ENST00000243662 SALL1Q9NSC2 1324 aa19.05■□□□□ 0.64
RAB38-201ENST00000243662 ECM29Q5VYK3 1845 aa19.05■□□□□ 0.64
RAB38-201ENST00000243662 USP17L8P0C7I0 530 aa19.04■□□□□ 0.64
RAB38-201ENST00000243662 GRIK5Q16478 980 aa19.04■□□□□ 0.64
RAB38-201ENST00000243662 WDR66Q8TBY9 1149 aa19.04■□□□□ 0.64
RAB38-201ENST00000243662 ADARB2Q9NS39 739 aaKnown RBP19.04■□□□□ 0.64
RAB38-201ENST00000243662 DOCK2Q92608 1830 aa19.03■□□□□ 0.64
RAB38-201ENST00000243662 POLR2AP24928 1970 aaKnown RBP19.03■□□□□ 0.64
RAB38-201ENST00000243662 IFIT2P09913 472 aaKnown RBP19.03■□□□□ 0.64
RAB38-201ENST00000243662 MMP14P50281 582 aa19.03■□□□□ 0.64
RAB38-201ENST00000243662 TTC39AQ5SRH9 613 aa19.03■□□□□ 0.64
RAB38-201ENST00000243662 PI16Q6UXB8 463 aa19.03■□□□□ 0.64
RAB38-201ENST00000243662 KIAA0825Q8IV33 1275 aa19.03■□□□□ 0.64
RAB38-201ENST00000243662 H7C1D1 291 aa19.03■□□□□ 0.64
RAB38-201ENST00000243662 EGFRP00533 1210 aa19.03■□□□□ 0.64
RAB38-201ENST00000243662 SPATA5Q8NB90 893 aa19.03■□□□□ 0.64
RAB38-201ENST00000243662 IPO9Q96P70 1041 aaKnown RBP19.03■□□□□ 0.64
RAB38-201ENST00000243662 SUGT1Q9Y2Z0 365 aa19.03■□□□□ 0.64
RAB38-201ENST00000243662 HIRAP54198 1017 aaPredicted RBP19.02■□□□□ 0.63
RAB38-201ENST00000243662 USP50Q70EL3 339 aaPredicted RBP19.02■□□□□ 0.63
RAB38-201ENST00000243662 SAMD7Q7Z3H4 446 aa19.02■□□□□ 0.63
RAB38-201ENST00000243662 PNMA8AQ86V59 439 aaPredicted RBP19.02■□□□□ 0.63
RAB38-201ENST00000243662 TRPM4Q8TD43 1214 aa19.02■□□□□ 0.63
RAB38-201ENST00000243662 MYH2Q9UKX2 1941 aa19.01■□□□□ 0.63
RAB38-201ENST00000243662 POTEIP0CG38 1075 aa19.01■□□□□ 0.63
RAB38-201ENST00000243662 POTEJP0CG39 1038 aa19.01■□□□□ 0.63
RAB38-201ENST00000243662 ANKRD45Q5TZF3 282 aa19.01■□□□□ 0.63
RAB38-201ENST00000243662 SALL3Q9BXA9 1300 aa19.01■□□□□ 0.63
RAB38-201ENST00000243662 MAST2Q6P0Q8 1798 aa19■□□□□ 0.63
RAB38-201ENST00000243662 OGFOD1Q8N543 542 aa19■□□□□ 0.63
RAB38-201ENST00000243662 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19■□□□□ 0.63
RAB38-201ENST00000243662 MYOZ2Q9NPC6 264 aa19■□□□□ 0.63
RAB38-201ENST00000243662 F8W031 263 aaPredicted RBP18.99■□□□□ 0.63
RAB38-201ENST00000243662 ATP5JP18859 108 aa18.99■□□□□ 0.63
RAB38-201ENST00000243662 PRDX5P30044 214 aa18.99■□□□□ 0.63
RAB38-201ENST00000243662 KIF4BQ2VIQ3 1234 aa18.99■□□□□ 0.63
RAB38-201ENST00000243662 TBC1D10BQ4KMP7 808 aaPredicted RBP18.99■□□□□ 0.63
RAB38-201ENST00000243662 C16orf71Q8IYS4 520 aaPredicted RBP18.99■□□□□ 0.63
RAB38-201ENST00000243662 ZGPATQ8N5A5 531 aaKnown RBP18.99■□□□□ 0.63
RAB38-201ENST00000243662 MTMR14Q8NCE2 650 aa18.99■□□□□ 0.63
RAB38-201ENST00000243662 ZBED3Q96IU2 234 aaPredicted RBP18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms