RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 ATP5J2-PTCD1G3V325 749 aa18.02■□□□□ 0.47
DDX55-201ENST00000238146 PTCD1O75127 700 aaKnown RBP18.02■□□□□ 0.47
DDX55-201ENST00000238146 YEATS4O95619 227 aa18.02■□□□□ 0.47
DDX55-201ENST00000238146 NLRP12P59046 1061 aa18.02■□□□□ 0.47
DDX55-201ENST00000238146 BMS1Q14692 1282 aaKnown RBP18.02■□□□□ 0.47
DDX55-201ENST00000238146 ZNF496Q96IT1 587 aaPredicted RBP18.02■□□□□ 0.47
DDX55-201ENST00000238146 NEUROD6Q96NK8 337 aa18.02■□□□□ 0.47
DDX55-201ENST00000238146 SLC52A2Q9HAB3 445 aa18.02■□□□□ 0.47
DDX55-201ENST00000238146 POLR3EQ9NVU0 708 aa18.02■□□□□ 0.47
DDX55-201ENST00000238146 SPTLC2O15270 562 aa18.01■□□□□ 0.47
DDX55-201ENST00000238146 ZNF202O95125 648 aa18.01■□□□□ 0.47
DDX55-201ENST00000238146 CLCN6P51797 869 aa18.01■□□□□ 0.47
DDX55-201ENST00000238146 EVCP57679 992 aa18.01■□□□□ 0.47
DDX55-201ENST00000238146 TTLL5Q6EMB2 1281 aa18.01■□□□□ 0.47
DDX55-201ENST00000238146 CHMP4CQ96CF2 233 aa18.01■□□□□ 0.47
DDX55-201ENST00000238146 FHOD1Q9Y613 1164 aa18.01■□□□□ 0.47
DDX55-201ENST00000238146 C5P01031 1676 aa18.01■□□□□ 0.47
DDX55-201ENST00000238146 A0A0U1RQG5 324 aaPredicted RBP18.01■□□□□ 0.47
DDX55-201ENST00000238146 LMBR1LQ6UX01 489 aa18.01■□□□□ 0.47
DDX55-201ENST00000238146 NFATC2IPQ8NCF5 419 aa18.01■□□□□ 0.47
DDX55-201ENST00000238146 MAST3O60307 1309 aa18.01■□□□□ 0.47
DDX55-201ENST00000238146 ADAMTS7Q9UKP4 1686 aa18■□□□□ 0.47
DDX55-201ENST00000238146 TUBB4AP04350 444 aa18■□□□□ 0.47
DDX55-201ENST00000238146 CASP7P55210 303 aa18■□□□□ 0.47
DDX55-201ENST00000238146 TIMM10P62072 90 aa18■□□□□ 0.47
DDX55-201ENST00000238146 FBXL16Q8N461 479 aa18■□□□□ 0.47
DDX55-201ENST00000238146 C8orf76Q96K31 380 aa18■□□□□ 0.47
DDX55-201ENST00000238146 ETF1P62495 437 aaKnown RBP18■□□□□ 0.47
DDX55-201ENST00000238146 TPM4P67936 248 aa18■□□□□ 0.47
DDX55-201ENST00000238146 DHX8Q14562 1220 aaKnown RBP18■□□□□ 0.47
DDX55-201ENST00000238146 MYSM1Q5VVJ2 828 aa18■□□□□ 0.47
DDX55-201ENST00000238146 FBXO18Q8NFZ0 1043 aa18■□□□□ 0.47
DDX55-201ENST00000238146 CCDC66A2RUB6 948 aa17.99■□□□□ 0.47
DDX55-201ENST00000238146 NRDCO43847 1150 aa17.99■□□□□ 0.47
DDX55-201ENST00000238146 LMOD1P29536 600 aaPredicted RBP17.99■□□□□ 0.47
DDX55-201ENST00000238146 FANCCQ00597 558 aa17.99■□□□□ 0.47
DDX55-201ENST00000238146 ARHGAP29Q52LW3 1261 aa17.99■□□□□ 0.47
DDX55-201ENST00000238146 ATG9AQ7Z3C6 839 aa17.99■□□□□ 0.47
DDX55-201ENST00000238146 FAM193AP78312 1265 aa17.99■□□□□ 0.47
DDX55-201ENST00000238146 AXDND1Q5T1B0 1012 aaPredicted RBP17.99■□□□□ 0.47
DDX55-201ENST00000238146 HOMER1Q86YM7 354 aa17.99■□□□□ 0.47
DDX55-201ENST00000238146 HSD3B7Q9H2F3 369 aa17.99■□□□□ 0.47
DDX55-201ENST00000238146 LMTK3Q96Q04 1460 aa17.98■□□□□ 0.47
DDX55-201ENST00000238146 ATP1A3P13637 1013 aa17.98■□□□□ 0.47
DDX55-201ENST00000238146 GJB4Q9NTQ9 266 aa17.98■□□□□ 0.47
DDX55-201ENST00000238146 RNF113AO15541 343 aaKnown RBP17.98■□□□□ 0.47
DDX55-201ENST00000238146 TICAM2Q86XR7 235 aa17.98■□□□□ 0.47
DDX55-201ENST00000238146 DNAI1Q9UI46 699 aa17.98■□□□□ 0.47
DDX55-201ENST00000238146 KDM6AO15550 1401 aaPredicted RBP17.98■□□□□ 0.47
DDX55-201ENST00000238146 M0R2C6 588 aa17.97■□□□□ 0.47
DDX55-201ENST00000238146 IKBKBO14920 756 aa17.97■□□□□ 0.47
DDX55-201ENST00000238146 PNMA6AP0CW24 399 aaPredicted RBP17.97■□□□□ 0.47
DDX55-201ENST00000238146 PFKFB1P16118 471 aa17.97■□□□□ 0.47
DDX55-201ENST00000238146 ISM2Q6H9L7 571 aa17.97■□□□□ 0.47
DDX55-201ENST00000238146 BRAPQ7Z569 592 aa17.97■□□□□ 0.47
DDX55-201ENST00000238146 NOL10Q9BSC4 688 aaKnown RBP17.97■□□□□ 0.47
DDX55-201ENST00000238146 ERICH4A6NGS2 130 aa17.97■□□□□ 0.47
DDX55-201ENST00000238146 KIF28PB7ZC32 967 aa17.97■□□□□ 0.47
DDX55-201ENST00000238146 CMA1P23946 247 aa17.97■□□□□ 0.47
DDX55-201ENST00000238146 TRIM65Q6PJ69 517 aa17.97■□□□□ 0.47
DDX55-201ENST00000238146 ORC3Q9UBD5 711 aaPredicted RBP17.97■□□□□ 0.47
DDX55-201ENST00000238146 PHLPP2Q6ZVD8 1323 aa17.97■□□□□ 0.47
DDX55-201ENST00000238146 SNRPA1P09661 255 aaKnown RBP17.96■□□□□ 0.47
DDX55-201ENST00000238146 FOXO4P98177 505 aa17.96■□□□□ 0.47
DDX55-201ENST00000238146 GORABQ5T7V8 394 aa17.96■□□□□ 0.47
DDX55-201ENST00000238146 ANO1Q5XXA6 986 aa17.96■□□□□ 0.47
DDX55-201ENST00000238146 SYNE3Q6ZMZ3 975 aa17.96■□□□□ 0.47
DDX55-201ENST00000238146 CREBRFQ8IUR6 639 aa17.96■□□□□ 0.47
DDX55-201ENST00000238146 HPS5Q9UPZ3 1129 aa17.96■□□□□ 0.47
DDX55-201ENST00000238146 FANCGO15287 622 aa17.96■□□□□ 0.47
DDX55-201ENST00000238146 PLA2G4AP47712 749 aa17.96■□□□□ 0.47
DDX55-201ENST00000238146 GPR108Q9NPR9 543 aa17.96■□□□□ 0.47
DDX55-201ENST00000238146 WDHD1O75717 1129 aaPredicted RBP17.95■□□□□ 0.46
DDX55-201ENST00000238146 ZRANB2O95218 330 aaKnown RBP eCLIP17.95■□□□□ 0.46
DDX55-201ENST00000238146 IFIT1P09914 478 aaKnown RBP17.95■□□□□ 0.46
DDX55-201ENST00000238146 DPF2Q92785 391 aa17.95■□□□□ 0.46
DDX55-201ENST00000238146 OSBP2Q969R2 916 aa17.95■□□□□ 0.46
DDX55-201ENST00000238146 CAMTA1Q9Y6Y1 1673 aa17.95■□□□□ 0.46
DDX55-201ENST00000238146 MROH7-TTC4A0A0A0MT08 1334 aa17.95■□□□□ 0.46
DDX55-201ENST00000238146 CCP110O43303 1012 aa17.95■□□□□ 0.46
DDX55-201ENST00000238146 LMOD2Q6P5Q4 547 aa17.95■□□□□ 0.46
DDX55-201ENST00000238146 UBXN4Q92575 508 aa17.95■□□□□ 0.46
DDX55-201ENST00000238146 TMX1Q9H3N1 280 aa17.95■□□□□ 0.46
DDX55-201ENST00000238146 KIF13AQ9H1H9 1805 aa17.95■□□□□ 0.46
DDX55-201ENST00000238146 KLF18A0A0U1RQI7 1052 aa17.95■□□□□ 0.46
DDX55-201ENST00000238146 FOXP2O15409 715 aa17.95■□□□□ 0.46
DDX55-201ENST00000238146 DHX16O60231 1041 aaKnown RBP17.95■□□□□ 0.46
DDX55-201ENST00000238146 HAND2P61296 217 aa17.95■□□□□ 0.46
DDX55-201ENST00000238146 KIF23Q02241 960 aaPredicted RBP17.95■□□□□ 0.46
DDX55-201ENST00000238146 AFDNP55196 1824 aaKnown RBP17.94■□□□□ 0.46
DDX55-201ENST00000238146 UBASH3AP57075 661 aa17.94■□□□□ 0.46
DDX55-201ENST00000238146 RAB11FIP4Q86YS3 637 aa17.94■□□□□ 0.46
DDX55-201ENST00000238146 REXO1L1PQ8IX06 675 aa17.94■□□□□ 0.46
DDX55-201ENST00000238146 TUBE1Q9UJT0 475 aa17.94■□□□□ 0.46
DDX55-201ENST00000238146 SLIT3O75094 1523 aa17.94■□□□□ 0.46
DDX55-201ENST00000238146 GOLGA8BA8MQT2 603 aa17.94■□□□□ 0.46
DDX55-201ENST00000238146 PRC1O43663 620 aa17.94■□□□□ 0.46
DDX55-201ENST00000238146 PHKG2P15735 406 aa17.94■□□□□ 0.46
DDX55-201ENST00000238146 MARCKSP29966 332 aaPredicted RBP17.94■□□□□ 0.46
DDX55-201ENST00000238146 CYP2C19P33261 490 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms