RNA–Protein interactions for RNA: ENST00000234179.6

PRKD3-201, Transcript of protein kinase D3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKD3, Length 5,900 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-201ENST00000234179 CCT4P50991 539 aaKnown RBP2.92□□□□□ -1.94
PRKD3-201ENST00000234179 MAP3K9P80192 1104 aa2.92□□□□□ -1.94
PRKD3-201ENST00000234179 PABPC4Q13310 644 aaKnown RBP eCLIP2.92□□□□□ -1.94
PRKD3-201ENST00000234179 SNAPC2Q13487 334 aa2.92□□□□□ -1.94
PRKD3-201ENST00000234179 ERO1BQ86YB8 467 aa2.92□□□□□ -1.94
PRKD3-201ENST00000234179 CELF1Q92879 486 aaKnown RBP2.92□□□□□ -1.94
PRKD3-201ENST00000234179 CASP8AP2Q9UKL3 1982 aa2.92□□□□□ -1.94
PRKD3-201ENST00000234179 GJB1P08034 283 aa2.92□□□□□ -1.94
PRKD3-201ENST00000234179 PLEKHF1Q96S99 279 aa2.92□□□□□ -1.94
PRKD3-201ENST00000234179 PARK7Q99497 189 aaKnown RBP2.92□□□□□ -1.94
PRKD3-201ENST00000234179 SCUBE2Q9NQ36 999 aa2.92□□□□□ -1.94
PRKD3-201ENST00000234179 KIF16BQ96L93 1317 aa2.92□□□□□ -1.94
PRKD3-201ENST00000234179 TBC1D8O95759 1140 aa2.92□□□□□ -1.94
PRKD3-201ENST00000234179 TMPOP42166 694 aaKnown RBP2.92□□□□□ -1.94
PRKD3-201ENST00000234179 CTSWP56202 376 aa2.92□□□□□ -1.94
PRKD3-201ENST00000234179 PPIL2Q13356 520 aa2.92□□□□□ -1.94
PRKD3-201ENST00000234179 KSR2Q6VAB6 950 aa2.92□□□□□ -1.94
PRKD3-201ENST00000234179 ANKRD23Q86SG2 305 aa2.92□□□□□ -1.94
PRKD3-201ENST00000234179 FAM83AQ86UY5 434 aa2.92□□□□□ -1.94
PRKD3-201ENST00000234179 GINM1Q9NU53 330 aa2.92□□□□□ -1.94
PRKD3-201ENST00000234179 ANKRD18BA2A2Z9 1011 aa2.92□□□□□ -1.94
PRKD3-201ENST00000234179 SPDYE5A6NIY4 337 aa2.92□□□□□ -1.94
PRKD3-201ENST00000234179 WNT10BO00744 389 aa2.92□□□□□ -1.94
PRKD3-201ENST00000234179 CXCL11O14625 94 aa2.92□□□□□ -1.94
PRKD3-201ENST00000234179 BMP8BP34820 402 aa2.92□□□□□ -1.94
PRKD3-201ENST00000234179 FXR1P51114 621 aaKnown RBP eCLIP2.92□□□□□ -1.94
PRKD3-201ENST00000234179 PTPN12Q05209 780 aaKnown RBP2.92□□□□□ -1.94
PRKD3-201ENST00000234179 DOK7Q18PE1 504 aa2.92□□□□□ -1.94
PRKD3-201ENST00000234179 TTLL5Q6EMB2 1281 aa2.92□□□□□ -1.94
PRKD3-201ENST00000234179 PXYLP1Q8TE99 480 aa2.92□□□□□ -1.94
PRKD3-201ENST00000234179 DEFB129Q9H1M3 183 aa2.92□□□□□ -1.94
PRKD3-201ENST00000234179 IL16Q14005 1332 aa2.92□□□□□ -1.94
PRKD3-201ENST00000234179 PSME4Q14997 1843 aa2.92□□□□□ -1.94
PRKD3-201ENST00000234179 FCGRTP55899 365 aa2.92□□□□□ -1.94
PRKD3-201ENST00000234179 PPATQ06203 517 aa2.92□□□□□ -1.94
PRKD3-201ENST00000234179 AIMP1Q12904 312 aaKnown RBP2.92□□□□□ -1.94
PRKD3-201ENST00000234179 UBE4AQ14139 1066 aa2.92□□□□□ -1.94
PRKD3-201ENST00000234179 FASTKD5Q7L8L6 764 aaKnown RBP2.92□□□□□ -1.94
PRKD3-201ENST00000234179 SLF2Q8IX21 1173 aa2.92□□□□□ -1.94
PRKD3-201ENST00000234179 IRF5Q13568 498 aa2.91□□□□□ -1.94
PRKD3-201ENST00000234179 FAM109BQ6ICB4 259 aaPredicted RBP2.91□□□□□ -1.94
PRKD3-201ENST00000234179 C3orf67Q6ZVT6 689 aa2.91□□□□□ -1.94
PRKD3-201ENST00000234179 PNMA3Q9UL41 463 aa2.91□□□□□ -1.94
PRKD3-201ENST00000234179 TLR2O60603 784 aa2.91□□□□□ -1.94
PRKD3-201ENST00000234179 IL1R1P14778 569 aa2.91□□□□□ -1.94
PRKD3-201ENST00000234179 PIP4K2AP48426 406 aaPredicted RBP2.91□□□□□ -1.94
PRKD3-201ENST00000234179 TMED8Q6PL24 325 aaPredicted RBP2.91□□□□□ -1.94
PRKD3-201ENST00000234179 SYMPKQ92797 1274 aaKnown RBP2.91□□□□□ -1.94
PRKD3-201ENST00000234179 FAM89AQ96GI7 184 aa2.91□□□□□ -1.94
PRKD3-201ENST00000234179 ZNF341Q9BYN7 854 aa2.91□□□□□ -1.94
PRKD3-201ENST00000234179 SRRDQ9UH36 339 aa2.91□□□□□ -1.94
PRKD3-201ENST00000234179 ADGRA2Q96PE1 1338 aa2.91□□□□□ -1.94
PRKD3-201ENST00000234179 CCL15-CCL14A0A0B4J2E2 113 aa2.91□□□□□ -1.94
PRKD3-201ENST00000234179 FARP2O94887 1054 aaPredicted RBP2.91□□□□□ -1.94
PRKD3-201ENST00000234179 CCL15Q16663 113 aa2.91□□□□□ -1.94
PRKD3-201ENST00000234179 DUSP27Q5VZP5 1158 aa2.91□□□□□ -1.94
PRKD3-201ENST00000234179 SLC17A8Q8NDX2 589 aa2.91□□□□□ -1.94
PRKD3-201ENST00000234179 LINS1Q8NG48 757 aa2.91□□□□□ -1.94
PRKD3-201ENST00000234179 PCGF6Q9BYE7 350 aa2.91□□□□□ -1.94
PRKD3-201ENST00000234179 FBXO3Q9UK99 471 aa2.91□□□□□ -1.94
PRKD3-201ENST00000234179 MYBBP1AQ9BQG0 1328 aaKnown RBP2.91□□□□□ -1.94
PRKD3-201ENST00000234179 TMEM265A0A087WTH1 108 aa2.91□□□□□ -1.94
PRKD3-201ENST00000234179 ZBTB7BO15156 539 aaPredicted RBP2.91□□□□□ -1.94
PRKD3-201ENST00000234179 DCTN1Q14203 1278 aa2.91□□□□□ -1.94
PRKD3-201ENST00000234179 WWC1Q8IX03 1113 aa2.91□□□□□ -1.94
PRKD3-201ENST00000234179 RAET1EQ8TD07 263 aa2.91□□□□□ -1.94
PRKD3-201ENST00000234179 ZIC5Q96T25 663 aa2.91□□□□□ -1.94
PRKD3-201ENST00000234179 CHPF2Q9P2E5 772 aa2.91□□□□□ -1.94
PRKD3-201ENST00000234179 MINPP1Q9UNW1 487 aa2.91□□□□□ -1.94
PRKD3-201ENST00000234179 ALDH1L1O75891 902 aa2.91□□□□□ -1.94
PRKD3-201ENST00000234179 GJA8P48165 433 aa2.91□□□□□ -1.94
PRKD3-201ENST00000234179 NOL9Q5SY16 702 aaKnown RBP2.91□□□□□ -1.94
PRKD3-201ENST00000234179 ZGPATQ8N5A5 531 aaKnown RBP2.91□□□□□ -1.94
PRKD3-201ENST00000234179 CD99L2Q8TCZ2 262 aa2.91□□□□□ -1.94
PRKD3-201ENST00000234179 CD209Q9NNX6 404 aa2.91□□□□□ -1.94
PRKD3-201ENST00000234179 H7C1W4 665 aa2.9□□□□□ -1.94
PRKD3-201ENST00000234179 SEMA3EO15041 775 aa2.9□□□□□ -1.94
PRKD3-201ENST00000234179 GRK4P32298 578 aa2.9□□□□□ -1.94
PRKD3-201ENST00000234179 CRHR2Q13324 411 aa2.9□□□□□ -1.94
PRKD3-201ENST00000234179 IFIT5Q13325 482 aaKnown RBP2.9□□□□□ -1.94
PRKD3-201ENST00000234179 TAF7LQ5H9L4 462 aa2.9□□□□□ -1.94
PRKD3-201ENST00000234179 LAMB1P07942 1786 aa2.9□□□□□ -1.94
PRKD3-201ENST00000234179 ZNF646O15015 1829 aaPredicted RBP2.9□□□□□ -1.94
PRKD3-201ENST00000234179 SASH1O94885 1247 aa2.9□□□□□ -1.95
PRKD3-201ENST00000234179 GCLCP48506 637 aaPredicted RBP2.9□□□□□ -1.95
PRKD3-201ENST00000234179 LACTBP83111 547 aaPredicted RBP2.9□□□□□ -1.95
PRKD3-201ENST00000234179 CCDC27Q2M243 656 aa2.9□□□□□ -1.95
PRKD3-201ENST00000234179 LRIT3Q3SXY7 679 aa2.9□□□□□ -1.95
PRKD3-201ENST00000234179 CFAP100Q494V2 611 aa2.9□□□□□ -1.95
PRKD3-201ENST00000234179 TTLL11Q8NHH1 800 aa2.9□□□□□ -1.95
PRKD3-201ENST00000234179 DPF3Q92784 378 aa2.9□□□□□ -1.95
PRKD3-201ENST00000234179 FBXW7Q969H0 707 aa2.9□□□□□ -1.95
PRKD3-201ENST00000234179 MYD88Q99836 296 aa2.9□□□□□ -1.95
PRKD3-201ENST00000234179 GNL3LQ9NVN8 582 aaKnown RBP2.9□□□□□ -1.95
PRKD3-201ENST00000234179 KCNH4Q9UQ05 1017 aa2.9□□□□□ -1.95
PRKD3-201ENST00000234179 STXBP5LQ9Y2K9 1186 aa2.9□□□□□ -1.95
PRKD3-201ENST00000234179 MROH5Q6ZUA9 1318 aa2.9□□□□□ -1.95
PRKD3-201ENST00000234179 CSF1RP07333 972 aa2.9□□□□□ -1.95
PRKD3-201ENST00000234179 ZNF853P0CG23 659 aa2.9□□□□□ -1.95
PRKD3-201ENST00000234179 NECAB2Q7Z6G3 386 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms