RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 TM6SF1Q9BZW5 370 aa15.74■□□□□ 0.11
NFKB1-201ENST00000226574 CABP5Q9NP86 173 aa15.74■□□□□ 0.11
NFKB1-201ENST00000226574 SEPT11Q9NVA2 429 aaKnown RBP15.74■□□□□ 0.11
NFKB1-201ENST00000226574 STX8Q9UNK0 236 aa15.74■□□□□ 0.11
NFKB1-201ENST00000226574 SPA17Q15506 151 aa15.73■□□□□ 0.11
NFKB1-201ENST00000226574 C11orf57Q6ZUT1 292 aaPredicted RBP15.73■□□□□ 0.11
NFKB1-201ENST00000226574 VPS18Q9P253 973 aa15.73■□□□□ 0.11
NFKB1-201ENST00000226574 POLR2DO15514 142 aaKnown RBP15.73■□□□□ 0.11
NFKB1-201ENST00000226574 CAPN2P17655 700 aa15.73■□□□□ 0.11
NFKB1-201ENST00000226574 ADKP55263 362 aaKnown RBP15.73■□□□□ 0.11
NFKB1-201ENST00000226574 GDAP1L1Q96MZ0 367 aa15.73■□□□□ 0.11
NFKB1-201ENST00000226574 HINFPQ9BQA5 517 aa15.73■□□□□ 0.11
NFKB1-201ENST00000226574 DESI2Q9BSY9 194 aa15.73■□□□□ 0.11
NFKB1-201ENST00000226574 CCDC194A0A1B0GVG4 234 aa15.73■□□□□ 0.11
NFKB1-201ENST00000226574 MYO1BO43795 1136 aa15.73■□□□□ 0.11
NFKB1-201ENST00000226574 YEATS4O95619 227 aa15.73■□□□□ 0.11
NFKB1-201ENST00000226574 CATIPQ7Z7H3 387 aa15.73■□□□□ 0.11
NFKB1-201ENST00000226574 EEF2KMTQ96G04 330 aa15.73■□□□□ 0.11
NFKB1-201ENST00000226574 BAG1Q99933 345 aaPredicted RBP15.73■□□□□ 0.11
NFKB1-201ENST00000226574 KCNJ14Q9UNX9 436 aa15.73■□□□□ 0.11
NFKB1-201ENST00000226574 E7EWF7 191 aa15.73■□□□□ 0.11
NFKB1-201ENST00000226574 CYP21A2P08686 494 aa15.73■□□□□ 0.11
NFKB1-201ENST00000226574 TAX1BP1Q86VP1 789 aa15.73■□□□□ 0.11
NFKB1-201ENST00000226574 IL25Q9H293 177 aa15.73■□□□□ 0.11
NFKB1-201ENST00000226574 GPHNQ9NQX3 736 aaPredicted RBP15.73■□□□□ 0.11
NFKB1-201ENST00000226574 KIAA0754O94854 1291 aa15.72■□□□□ 0.11
NFKB1-201ENST00000226574 SLC5A1P13866 664 aa15.72■□□□□ 0.11
NFKB1-201ENST00000226574 MTX1Q13505 466 aa15.72■□□□□ 0.11
NFKB1-201ENST00000226574 CACNA2D4Q7Z3S7 1137 aa15.72■□□□□ 0.11
NFKB1-201ENST00000226574 SBNO1A3KN83 1393 aa15.72■□□□□ 0.11
NFKB1-201ENST00000226574 TRIM21P19474 475 aaKnown RBP15.72■□□□□ 0.11
NFKB1-201ENST00000226574 CYP7A1P22680 504 aa15.72■□□□□ 0.11
NFKB1-201ENST00000226574 PNOCQ13519 176 aa15.72■□□□□ 0.11
NFKB1-201ENST00000226574 LRRC8AQ8IWT6 810 aa15.72■□□□□ 0.11
NFKB1-201ENST00000226574 MAP4K1Q92918 833 aa15.72■□□□□ 0.11
NFKB1-201ENST00000226574 METTL22Q9BUU2 404 aaPredicted RBP15.72■□□□□ 0.11
NFKB1-201ENST00000226574 VPS16Q9H269 839 aa15.72■□□□□ 0.11
NFKB1-201ENST00000226574 ARHGEF5Q12774 1597 aa15.72■□□□□ 0.11
NFKB1-201ENST00000226574 TSPY2A6NKD2 308 aa15.72■□□□□ 0.11
NFKB1-201ENST00000226574 SCRN1Q12765 414 aa15.72■□□□□ 0.11
NFKB1-201ENST00000226574 TRIM47Q96LD4 638 aa15.72■□□□□ 0.11
NFKB1-201ENST00000226574 DBNLQ9UJU6 430 aaKnown RBP15.72■□□□□ 0.11
NFKB1-201ENST00000226574 NFE2L3Q9Y4A8 694 aa15.72■□□□□ 0.11
NFKB1-201ENST00000226574 AOX1Q06278 1338 aa15.71■□□□□ 0.11
NFKB1-201ENST00000226574 GPAA1O43292 621 aa15.71■□□□□ 0.11
NFKB1-201ENST00000226574 MAGEB6Q8N7X4 407 aa15.71■□□□□ 0.11
NFKB1-201ENST00000226574 PI4K2BQ8TCG2 481 aa15.71■□□□□ 0.11
NFKB1-201ENST00000226574 PDLIM2Q96JY6 352 aa15.71■□□□□ 0.11
NFKB1-201ENST00000226574 TAF5LO75529 589 aa15.71■□□□□ 0.11
NFKB1-201ENST00000226574 CLIC6Q96NY7 704 aa15.71■□□□□ 0.11
NFKB1-201ENST00000226574 BCCIPQ9P287 314 aaKnown RBP eCLIP15.71■□□□□ 0.11
NFKB1-201ENST00000226574 KCNH3Q9ULD8 1083 aa15.71■□□□□ 0.11
NFKB1-201ENST00000226574 CCDC175P0C221 793 aa15.71■□□□□ 0.1
NFKB1-201ENST00000226574 ZAP70P43403 619 aa15.71■□□□□ 0.1
NFKB1-201ENST00000226574 NDUFA8P51970 172 aa15.71■□□□□ 0.1
NFKB1-201ENST00000226574 PPP2R3AQ06190 1150 aa15.71■□□□□ 0.1
NFKB1-201ENST00000226574 PCDHA7Q9UN72 937 aa15.71■□□□□ 0.1
NFKB1-201ENST00000226574 EYA2O00167 538 aa15.7■□□□□ 0.1
NFKB1-201ENST00000226574 ZFYP08048 801 aaPredicted RBP15.7■□□□□ 0.1
NFKB1-201ENST00000226574 CTR9Q6PD62 1173 aa15.7■□□□□ 0.1
NFKB1-201ENST00000226574 IPO4Q8TEX9 1081 aaKnown RBP15.7■□□□□ 0.1
NFKB1-201ENST00000226574 CCDC43Q96MW1 224 aaKnown RBP15.7■□□□□ 0.1
NFKB1-201ENST00000226574 TTC37Q6PGP7 1564 aa15.7■□□□□ 0.1
NFKB1-201ENST00000226574 ZNF174Q15697 407 aa15.7■□□□□ 0.1
NFKB1-201ENST00000226574 UBA5Q9GZZ9 404 aa15.7■□□□□ 0.1
NFKB1-201ENST00000226574 GBP3Q9H0R5 595 aa15.7■□□□□ 0.1
NFKB1-201ENST00000226574 TRPM1Q7Z4N2 1603 aa15.7■□□□□ 0.1
NFKB1-201ENST00000226574 CTAGE15A4D2H0 777 aa15.7■□□□□ 0.1
NFKB1-201ENST00000226574 NEURL1BA8MQ27 555 aa15.7■□□□□ 0.1
NFKB1-201ENST00000226574 COBLO75128 1261 aa15.7■□□□□ 0.1
NFKB1-201ENST00000226574 CHGBP05060 677 aa15.7■□□□□ 0.1
NFKB1-201ENST00000226574 CTAGE8P0CG41 777 aa15.7■□□□□ 0.1
NFKB1-201ENST00000226574 CTAGE6Q86UF2 777 aa15.7■□□□□ 0.1
NFKB1-201ENST00000226574 CTAGE4Q8IX94 777 aa15.7■□□□□ 0.1
NFKB1-201ENST00000226574 CCDC191Q8NCU4 936 aa15.7■□□□□ 0.1
NFKB1-201ENST00000226574 TCEAL9Q9UHQ7 104 aa15.7■□□□□ 0.1
NFKB1-201ENST00000226574 VWA3AA6NCI4 1184 aa15.69■□□□□ 0.1
NFKB1-201ENST00000226574 GOLGA6L10A6NI86 522 aa15.69■□□□□ 0.1
NFKB1-201ENST00000226574 TRIM75PA6NK02 468 aa15.69■□□□□ 0.1
NFKB1-201ENST00000226574 LRRC24Q50LG9 513 aa15.69■□□□□ 0.1
NFKB1-201ENST00000226574 KIAA1468Q9P260 1216 aa15.69■□□□□ 0.1
NFKB1-201ENST00000226574 CLIC4Q9Y696 253 aa15.69■□□□□ 0.1
NFKB1-201ENST00000226574 DPCR1Q3MIW9 517 aa15.69■□□□□ 0.1
NFKB1-201ENST00000226574 CAVIN4Q5BKX8 364 aa15.69■□□□□ 0.1
NFKB1-201ENST00000226574 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.69■□□□□ 0.1
NFKB1-201ENST00000226574 XAGE2Q96GT9 111 aa15.69■□□□□ 0.1
NFKB1-201ENST00000226574 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.69■□□□□ 0.1
NFKB1-201ENST00000226574 PLEKHG3A1L390 1219 aa15.69■□□□□ 0.1
NFKB1-201ENST00000226574 AKR1B10O60218 316 aa15.69■□□□□ 0.1
NFKB1-201ENST00000226574 ADAMTS2O95450 1211 aa15.69■□□□□ 0.1
NFKB1-201ENST00000226574 ARID5AQ03989 594 aa15.69■□□□□ 0.1
NFKB1-201ENST00000226574 HLTFQ14527 1009 aaKnown RBP eCLIP15.69■□□□□ 0.1
NFKB1-201ENST00000226574 KRT40Q6A162 431 aa15.69■□□□□ 0.1
NFKB1-201ENST00000226574 ZCRB1Q8TBF4 217 aaKnown RBP15.69■□□□□ 0.1
NFKB1-201ENST00000226574 MBD4O95243 580 aa15.68■□□□□ 0.1
NFKB1-201ENST00000226574 MCM7P33993 719 aa15.68■□□□□ 0.1
NFKB1-201ENST00000226574 RDXP35241 583 aaKnown RBP15.68■□□□□ 0.1
NFKB1-201ENST00000226574 CCDC178Q5BJE1 867 aa15.68■□□□□ 0.1
NFKB1-201ENST00000226574 DIS3L2Q8IYB7 885 aaKnown RBP15.68■□□□□ 0.1
NFKB1-201ENST00000226574 RNF41Q9H4P4 317 aaPredicted RBP15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms