RNA–Protein interactions for RNA: ENST00000639695.1

RFC1-217, Transcript of replication factor C subunit 1, humanhuman

TSL 5 BASIC

Gene RFC1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-217ENST00000639695 MAGOHP61326 146 aaKnown RBP4.03□□□□□ -1.76
RFC1-217ENST00000639695 CLEC12BQ2HXU8 276 aa4.03□□□□□ -1.76
RFC1-217ENST00000639695 GOLGA7BQ2TAP0 167 aa4.03□□□□□ -1.76
RFC1-217ENST00000639695 SLC36A2Q495M3 483 aa4.03□□□□□ -1.76
RFC1-217ENST00000639695 DNAL1Q4LDG9 190 aa4.03□□□□□ -1.76
RFC1-217ENST00000639695 KLHL12Q53G59 568 aa4.03□□□□□ -1.76
RFC1-217ENST00000639695 FAM222AQ5U5X8 452 aa4.03□□□□□ -1.76
RFC1-217ENST00000639695 ZNF773Q6PK81 442 aa4.03□□□□□ -1.76
RFC1-217ENST00000639695 TIFABQ6ZNK6 161 aa4.03□□□□□ -1.76
RFC1-217ENST00000639695 FA2HQ7L5A8 372 aa4.03□□□□□ -1.76
RFC1-217ENST00000639695 BLIDQ8IZY5 108 aa4.03□□□□□ -1.76
RFC1-217ENST00000639695 ZDHHC22Q8N966 263 aa4.03□□□□□ -1.76
RFC1-217ENST00000639695 SMIM12Q96EX1 92 aa4.03□□□□□ -1.76
RFC1-217ENST00000639695 CYYR1Q96J86 154 aa4.03□□□□□ -1.76
RFC1-217ENST00000639695 RNF5Q99942 180 aa4.03□□□□□ -1.76
RFC1-217ENST00000639695 METTL9Q9H1A3 318 aa4.03□□□□□ -1.76
RFC1-217ENST00000639695 FBXO6Q9NRD1 293 aaPredicted RBP4.03□□□□□ -1.76
RFC1-217ENST00000639695 DMAC2Q9NW81 257 aa4.03□□□□□ -1.76
RFC1-217ENST00000639695 C14orf166Q9Y224 244 aaKnown RBP4.03□□□□□ -1.76
RFC1-217ENST00000639695 DAPL1A0PJW8 107 aa4.02□□□□□ -1.77
RFC1-217ENST00000639695 CCRL2O00421 344 aa4.02□□□□□ -1.77
RFC1-217ENST00000639695 CCNKO75909 580 aa4.02□□□□□ -1.77
RFC1-217ENST00000639695 SOX14O95416 240 aa4.02□□□□□ -1.77
RFC1-217ENST00000639695 APOEP02649 317 aa4.02□□□□□ -1.77
RFC1-217ENST00000639695 SOD3P08294 240 aa4.02□□□□□ -1.77
RFC1-217ENST00000639695 SEC11BP0C7V7 166 aa4.02□□□□□ -1.77
RFC1-217ENST00000639695 NPY1RP25929 384 aa4.02□□□□□ -1.77
RFC1-217ENST00000639695 HLA-DMAP28067 261 aa4.02□□□□□ -1.77
RFC1-217ENST00000639695 ACTR1BP42025 376 aa4.02□□□□□ -1.77
RFC1-217ENST00000639695 PSMD7P51665 324 aa4.02□□□□□ -1.77
RFC1-217ENST00000639695 PTGES3Q15185 160 aaKnown RBP4.02□□□□□ -1.77
RFC1-217ENST00000639695 NXNL2Q5VZ03 156 aa4.02□□□□□ -1.77
RFC1-217ENST00000639695 OR8A1Q8NGG7 326 aa4.02□□□□□ -1.77
RFC1-217ENST00000639695 OR4P4Q8NGL7 312 aa4.02□□□□□ -1.77
RFC1-217ENST00000639695 C17orf50Q8WW18 174 aa4.02□□□□□ -1.77
RFC1-217ENST00000639695 THTPAQ9BU02 230 aa4.02□□□□□ -1.77
RFC1-217ENST00000639695 NSRP1Q9H0G5 558 aaKnown RBP4.02□□□□□ -1.77
RFC1-217ENST00000639695 RBM12B-AS1Q9P1G2 102 aa4.02□□□□□ -1.77
RFC1-217ENST00000639695 KLK12Q9UKR0 248 aa4.02□□□□□ -1.77
RFC1-217ENST00000639695 RAB3GAP2Q9H2M9 1393 aa4.02□□□□□ -1.77
RFC1-217ENST00000639695 NUP214P35658 2090 aaPredicted RBP4.01□□□□□ -1.77
RFC1-217ENST00000639695 IGKV1-6A0A0C4DH72 117 aa4.01□□□□□ -1.77
RFC1-217ENST00000639695 A0A1W2PNU3 283 aaPredicted RBP4.01□□□□□ -1.77
RFC1-217ENST00000639695 CEACAM18A8MTB9 384 aa4.01□□□□□ -1.77
RFC1-217ENST00000639695 CA2P00918 260 aa4.01□□□□□ -1.77
RFC1-217ENST00000639695 IGKV1-39P01597 117 aa4.01□□□□□ -1.77
RFC1-217ENST00000639695 IGKV1D-39P04432 117 aa4.01□□□□□ -1.77
RFC1-217ENST00000639695 IL4P05112 153 aa4.01□□□□□ -1.77
RFC1-217ENST00000639695 BLVRAP53004 296 aa4.01□□□□□ -1.77
RFC1-217ENST00000639695 FAM3AP98173 230 aa4.01□□□□□ -1.77
RFC1-217ENST00000639695 TBC1D28Q2M2D7 210 aa4.01□□□□□ -1.77
RFC1-217ENST00000639695 LINC00303Q3SY05 128 aa4.01□□□□□ -1.77
RFC1-217ENST00000639695 PDZD11Q5EBL8 140 aa4.01□□□□□ -1.77
RFC1-217ENST00000639695 KHDRBS2Q5VWX1 349 aaKnown RBP4.01□□□□□ -1.77
RFC1-217ENST00000639695 GLYATQ6IB77 296 aa4.01□□□□□ -1.77
RFC1-217ENST00000639695 Q6P435 159 aa4.01□□□□□ -1.77
RFC1-217ENST00000639695 OLIG3Q7RTU3 272 aa4.01□□□□□ -1.77
RFC1-217ENST00000639695 ZNF555Q8NEP9 628 aa4.01□□□□□ -1.77
RFC1-217ENST00000639695 OR52E4Q8NGH9 312 aa4.01□□□□□ -1.77
RFC1-217ENST00000639695 OR52N1Q8NH53 320 aa4.01□□□□□ -1.77
RFC1-217ENST00000639695 STOML3Q8TAV4 291 aa4.01□□□□□ -1.77
RFC1-217ENST00000639695 FRZBQ92765 325 aa4.01□□□□□ -1.77
RFC1-217ENST00000639695 OLFM3Q96PB7 478 aa4.01□□□□□ -1.77
RFC1-217ENST00000639695 LINC01587Q99440 93 aa4.01□□□□□ -1.77
RFC1-217ENST00000639695 ULBP1Q9BZM6 244 aa4.01□□□□□ -1.77
RFC1-217ENST00000639695 NOS1P29475 1434 aa4.01□□□□□ -1.77
RFC1-217ENST00000639695 IGHV2-26A0A0B4J1V2 119 aa4□□□□□ -1.77
RFC1-217ENST00000639695 LGALS9O00182 355 aa4□□□□□ -1.77
RFC1-217ENST00000639695 CXorf1O96002 111 aa4□□□□□ -1.77
RFC1-217ENST00000639695 CELP19835 753 aa4□□□□□ -1.77
RFC1-217ENST00000639695 CDC20Q12834 499 aa4□□□□□ -1.77
RFC1-217ENST00000639695 LINC00483Q53H64 154 aa4□□□□□ -1.77
RFC1-217ENST00000639695 SLC25A45Q8N413 288 aa4□□□□□ -1.77
RFC1-217ENST00000639695 GATD1Q8NB37 220 aa4□□□□□ -1.77
RFC1-217ENST00000639695 OR51E2Q9H255 320 aa4□□□□□ -1.77
RFC1-217ENST00000639695 ZSCAN16Q9H4T2 348 aaPredicted RBP4□□□□□ -1.77
RFC1-217ENST00000639695 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4□□□□□ -1.77
RFC1-217ENST00000639695 ADCY9O60503 1353 aa4□□□□□ -1.77
RFC1-217ENST00000639695 IGKV6D-41A0A0C4DH26 115 aa3.99□□□□□ -1.77
RFC1-217ENST00000639695 SLC16A4O15374 487 aa3.99□□□□□ -1.77
RFC1-217ENST00000639695 OR7C2O60412 319 aa3.99□□□□□ -1.77
RFC1-217ENST00000639695 STX10O60499 249 aa3.99□□□□□ -1.77
RFC1-217ENST00000639695 CNMDO75829 334 aa3.99□□□□□ -1.77
RFC1-217ENST00000639695 COILP38432 576 aaPredicted RBP3.99□□□□□ -1.77
RFC1-217ENST00000639695 C1QTNF8P60827 252 aa3.99□□□□□ -1.77
RFC1-217ENST00000639695 PAFAH1B3Q15102 231 aaKnown RBP3.99□□□□□ -1.77
RFC1-217ENST00000639695 PRSS54Q6PEW0 395 aa3.99□□□□□ -1.77
RFC1-217ENST00000639695 NT5DC3Q86UY8 548 aa3.99□□□□□ -1.77
RFC1-217ENST00000639695 ZNF101Q8IZC7 436 aa3.99□□□□□ -1.77
RFC1-217ENST00000639695 MUC15Q8N387 334 aa3.99□□□□□ -1.77
RFC1-217ENST00000639695 SMIM19Q96E16 107 aa3.99□□□□□ -1.77
RFC1-217ENST00000639695 C8orf76Q96K31 380 aa3.99□□□□□ -1.77
RFC1-217ENST00000639695 MS4A8Q9BY19 250 aa3.99□□□□□ -1.77
RFC1-217ENST00000639695 FBXL15Q9H469 300 aa3.99□□□□□ -1.77
RFC1-217ENST00000639695 METTL17Q9H7H0 456 aaPredicted RBP3.99□□□□□ -1.77
RFC1-217ENST00000639695 SND1-IT1Q9HBX3 110 aa3.99□□□□□ -1.77
RFC1-217ENST00000639695 RWDD2AQ9UIY3 292 aa3.99□□□□□ -1.77
RFC1-217ENST00000639695 POMPQ9Y244 141 aa3.99□□□□□ -1.77
RFC1-217ENST00000639695 ZNF706Q9Y5V0 76 aaPredicted RBP3.99□□□□□ -1.77
RFC1-217ENST00000639695 MAP3K5Q99683 1374 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms