RNA–Protein interactions for RNA: ENST00000639501.1

PMS1-222, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 2,506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-222ENST00000639501 SMCO3A2RU48 225 aa17.73■□□□□ 0.43
PMS1-222ENST00000639501 ZNF732B4DXR9 585 aa17.73■□□□□ 0.43
PMS1-222ENST00000639501 CTSSP25774 331 aa17.73■□□□□ 0.43
PMS1-222ENST00000639501 CD200P41217 278 aa17.73■□□□□ 0.43
PMS1-222ENST00000639501 ZNF41P51814 821 aaPredicted RBP17.73■□□□□ 0.43
PMS1-222ENST00000639501 ZFP36L1Q07352 338 aaKnown RBP17.73■□□□□ 0.43
PMS1-222ENST00000639501 ENDOGQ14249 297 aaKnown RBP17.73■□□□□ 0.43
PMS1-222ENST00000639501 KIAA0895LQ68EN5 471 aa17.73■□□□□ 0.43
PMS1-222ENST00000639501 STX12Q86Y82 276 aa17.73■□□□□ 0.43
PMS1-222ENST00000639501 TGIF2LXQ8IUE1 241 aa17.73■□□□□ 0.43
PMS1-222ENST00000639501 PLPP5Q8NEB5 264 aa17.73■□□□□ 0.43
PMS1-222ENST00000639501 SNIP1Q8TAD8 396 aaKnown RBP17.73■□□□□ 0.43
PMS1-222ENST00000639501 LMX1AQ8TE12 382 aa17.73■□□□□ 0.43
PMS1-222ENST00000639501 PLEKHF2Q9H8W4 249 aa17.73■□□□□ 0.43
PMS1-222ENST00000639501 C3orf85A0A1B0GTC6 90 aa17.73■□□□□ 0.43
PMS1-222ENST00000639501 LOC102723971A0A1B0GUV8 181 aa17.73■□□□□ 0.43
PMS1-222ENST00000639501 TRDCB7Z8K6 153 aa17.73■□□□□ 0.43
PMS1-222ENST00000639501 SUMO3P55854 103 aaPredicted RBP17.73■□□□□ 0.43
PMS1-222ENST00000639501 RAB11AP62491 216 aa17.73■□□□□ 0.43
PMS1-222ENST00000639501 ZNF154Q13106 437 aa17.73■□□□□ 0.43
PMS1-222ENST00000639501 OR5R1Q8NH85 324 aa17.73■□□□□ 0.43
PMS1-222ENST00000639501 GNG13Q9P2W3 67 aa17.73■□□□□ 0.43
PMS1-222ENST00000639501 PNLIPP16233 465 aa17.72■□□□□ 0.43
PMS1-222ENST00000639501 ZNF880Q6PDB4 577 aa17.72■□□□□ 0.43
PMS1-222ENST00000639501 CMTM1Q8IZ96 169 aa17.72■□□□□ 0.43
PMS1-222ENST00000639501 HLA-CQ95604 372 aa17.72■□□□□ 0.43
PMS1-222ENST00000639501 RCC1LQ96I51 464 aaKnown RBP17.72■□□□□ 0.43
PMS1-222ENST00000639501 SYT3Q9BQG1 590 aa17.72■□□□□ 0.43
PMS1-222ENST00000639501 PHF7Q9BWX1 381 aaPredicted RBP17.72■□□□□ 0.43
PMS1-222ENST00000639501 METTL9Q9H1A3 318 aa17.72■□□□□ 0.43
PMS1-222ENST00000639501 IGKV1-12A0A0C4DH73 117 aa17.72■□□□□ 0.43
PMS1-222ENST00000639501 MKRN2OSH3BPM6 223 aa17.72■□□□□ 0.43
PMS1-222ENST00000639501 ETV2O00321 342 aaPredicted RBP17.72■□□□□ 0.43
PMS1-222ENST00000639501 IGKV1D-12P01611 117 aa17.72■□□□□ 0.43
PMS1-222ENST00000639501 GZMBP10144 247 aa17.72■□□□□ 0.43
PMS1-222ENST00000639501 BLKP51451 505 aa17.72■□□□□ 0.43
PMS1-222ENST00000639501 RND2P52198 227 aa17.72■□□□□ 0.43
PMS1-222ENST00000639501 CLDN17P56750 224 aa17.72■□□□□ 0.43
PMS1-222ENST00000639501 KLHDC7BQ96G42 594 aa17.72■□□□□ 0.43
PMS1-222ENST00000639501 GUCD1Q96NT3 240 aa17.72■□□□□ 0.43
PMS1-222ENST00000639501 PIAS3Q9Y6X2 628 aa17.72■□□□□ 0.43
PMS1-222ENST00000639501 A0A1B0GU03 582 aa17.71■□□□□ 0.43
PMS1-222ENST00000639501 MPPED1O15442 326 aa17.71■□□□□ 0.43
PMS1-222ENST00000639501 HSPA12AO43301 675 aa17.71■□□□□ 0.43
PMS1-222ENST00000639501 ADAM20O43506 726 aa17.71■□□□□ 0.43
PMS1-222ENST00000639501 ZNF100Q8IYN0 542 aa17.71■□□□□ 0.43
PMS1-222ENST00000639501 ZNF664Q8N3J9 261 aa17.71■□□□□ 0.43
PMS1-222ENST00000639501 NAT6Q93015 286 aa17.71■□□□□ 0.43
PMS1-222ENST00000639501 POM121Q96HA1 1249 aa17.71■□□□□ 0.43
PMS1-222ENST00000639501 MRGPRX4Q96LA9 322 aa17.71■□□□□ 0.43
PMS1-222ENST00000639501 UNC13CQ8NB66 2214 aa17.71■□□□□ 0.43
PMS1-222ENST00000639501 A0A087WZY1 265 aa17.71■□□□□ 0.43
PMS1-222ENST00000639501 A8MWP6 167 aa17.71■□□□□ 0.43
PMS1-222ENST00000639501 OR2J2O76002 312 aa17.71■□□□□ 0.43
PMS1-222ENST00000639501 CDS2O95674 445 aa17.71■□□□□ 0.43
PMS1-222ENST00000639501 APLNRP35414 380 aa17.71■□□□□ 0.43
PMS1-222ENST00000639501 CD81P60033 236 aa17.71■□□□□ 0.43
PMS1-222ENST00000639501 SPCS3P61009 180 aa17.71■□□□□ 0.43
PMS1-222ENST00000639501 DEFB133Q30KQ1 61 aa17.71■□□□□ 0.43
PMS1-222ENST00000639501 BATF2Q8N1L9 274 aa17.71■□□□□ 0.43
PMS1-222ENST00000639501 TMEM222Q9H0R3 208 aa17.71■□□□□ 0.43
PMS1-222ENST00000639501 ASCC3Q8N3C0 2202 aaKnown RBP17.71■□□□□ 0.43
PMS1-222ENST00000639501 M0R135 149 aa17.7■□□□□ 0.42
PMS1-222ENST00000639501 AMBPP02760 352 aa17.7■□□□□ 0.42
PMS1-222ENST00000639501 CD55P08174 381 aa17.7■□□□□ 0.42
PMS1-222ENST00000639501 BTF3P20290 206 aaKnown RBP17.7■□□□□ 0.42
PMS1-222ENST00000639501 MPV17LQ2QL34 196 aa17.7■□□□□ 0.42
PMS1-222ENST00000639501 DEFB123Q8N688 67 aa17.7■□□□□ 0.42
PMS1-222ENST00000639501 ZNF799Q96GE5 643 aa17.7■□□□□ 0.42
PMS1-222ENST00000639501 OXGR1Q96P68 337 aa17.7■□□□□ 0.42
PMS1-222ENST00000639501 UCK1Q9HA47 277 aa17.7■□□□□ 0.42
PMS1-222ENST00000639501 ZFP92A6NM28 416 aa17.7■□□□□ 0.42
PMS1-222ENST00000639501 IL18BPO95998 194 aa17.7■□□□□ 0.42
PMS1-222ENST00000639501 PPYP01298 95 aa17.7■□□□□ 0.42
PMS1-222ENST00000639501 MSR1P21757 451 aa17.7■□□□□ 0.42
PMS1-222ENST00000639501 PTGDSP41222 190 aa17.7■□□□□ 0.42
PMS1-222ENST00000639501 HERV-K104P61576 105 aa17.7■□□□□ 0.42
PMS1-222ENST00000639501 JOSD1Q15040 202 aaPredicted RBP17.7■□□□□ 0.42
PMS1-222ENST00000639501 OR8G1Q15617 311 aa17.7■□□□□ 0.42
PMS1-222ENST00000639501 ADPRHL1Q8NDY3 354 aa17.7■□□□□ 0.42
PMS1-222ENST00000639501 RBMXL1Q96E39 390 aaKnown RBP17.7■□□□□ 0.42
PMS1-222ENST00000639501 ZNF665Q9H7R5 613 aa17.7■□□□□ 0.42
PMS1-222ENST00000639501 CCDC71LQ8N9Z2 235 aa17.69■□□□□ 0.42
PMS1-222ENST00000639501 OR4X1Q8NH49 305 aa17.69■□□□□ 0.42
PMS1-222ENST00000639501 NABP1Q96AH0 204 aa17.69■□□□□ 0.42
PMS1-222ENST00000639501 LURAP1Q96LR2 239 aa17.69■□□□□ 0.42
PMS1-222ENST00000639501 SIGLEC12Q96PQ1 595 aa17.69■□□□□ 0.42
PMS1-222ENST00000639501 NEU1Q99519 415 aa17.69■□□□□ 0.42
PMS1-222ENST00000639501 CDH20Q9HBT6 801 aa17.69■□□□□ 0.42
PMS1-222ENST00000639501 ZNF286AQ9HBT8 521 aa17.69■□□□□ 0.42
PMS1-222ENST00000639501 CLDN34H7C241 214 aa17.69■□□□□ 0.42
PMS1-222ENST00000639501 TNFSF12O43508 249 aa17.69■□□□□ 0.42
PMS1-222ENST00000639501 CYB5R3P00387 301 aaPredicted RBP17.69■□□□□ 0.42
PMS1-222ENST00000639501 GNRHRP30968 328 aa17.69■□□□□ 0.42
PMS1-222ENST00000639501 UCP3P55916 312 aa17.69■□□□□ 0.42
PMS1-222ENST00000639501 VAMP2P63027 116 aa17.69■□□□□ 0.42
PMS1-222ENST00000639501 USF2Q15853 346 aaPredicted RBP17.69■□□□□ 0.42
PMS1-222ENST00000639501 NKAIN1Q4KMZ8 207 aa17.69■□□□□ 0.42
PMS1-222ENST00000639501 Q6ZSR3 168 aa17.69■□□□□ 0.42
PMS1-222ENST00000639501 TBC1D26Q86UD7 250 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms