RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 FAM86C1Q9NVL1 165 aa17.37■□□□□ 0.37
SYNGAP1-227ENST00000638142 PRUNE2Q8WUY3 3088 aa17.37■□□□□ 0.37
SYNGAP1-227ENST00000638142 C9J4A7 227 aa17.36■□□□□ 0.37
SYNGAP1-227ENST00000638142 PITX3O75364 302 aa17.36■□□□□ 0.37
SYNGAP1-227ENST00000638142 IGSF11Q5DX21 431 aa17.36■□□□□ 0.37
SYNGAP1-227ENST00000638142 RIPPLY2Q5TAB7 128 aa17.36■□□□□ 0.37
SYNGAP1-227ENST00000638142 OR8G5Q8NG78 346 aa17.36■□□□□ 0.37
SYNGAP1-227ENST00000638142 OR14L1PQ8NHC6 308 aa17.36■□□□□ 0.37
SYNGAP1-227ENST00000638142 PIGCQ92535 297 aa17.36■□□□□ 0.37
SYNGAP1-227ENST00000638142 ABHD14BQ96IU4 210 aa17.36■□□□□ 0.37
SYNGAP1-227ENST00000638142 TMEM56Q96MV1 263 aa17.36■□□□□ 0.37
SYNGAP1-227ENST00000638142 WNT16Q9UBV4 365 aa17.36■□□□□ 0.37
SYNGAP1-227ENST00000638142 TMEM56-RWDD3S4R434 201 aa17.36■□□□□ 0.37
SYNGAP1-227ENST00000638142 SHANK1Q9Y566 2161 aa17.36■□□□□ 0.37
SYNGAP1-227ENST00000638142 NKX2-6A6NCS4 301 aa17.36■□□□□ 0.37
SYNGAP1-227ENST00000638142 TXNL1O43396 289 aa17.36■□□□□ 0.37
SYNGAP1-227ENST00000638142 OR7C1O76099 320 aaPredicted RBP17.36■□□□□ 0.37
SYNGAP1-227ENST00000638142 ARG1P05089 322 aa17.36■□□□□ 0.37
SYNGAP1-227ENST00000638142 NKX2-1P43699 371 aaPredicted RBP17.36■□□□□ 0.37
SYNGAP1-227ENST00000638142 LYSMD4Q5XG99 296 aa17.36■□□□□ 0.37
SYNGAP1-227ENST00000638142 Q6ZS49 121 aa17.36■□□□□ 0.37
SYNGAP1-227ENST00000638142 DPPA2Q7Z7J5 298 aa17.36■□□□□ 0.37
SYNGAP1-227ENST00000638142 AGBL5Q8NDL9 886 aa17.36■□□□□ 0.37
SYNGAP1-227ENST00000638142 UBE2ZQ9H832 354 aaPredicted RBP17.36■□□□□ 0.37
SYNGAP1-227ENST00000638142 IFNA17P01571 189 aa17.35■□□□□ 0.37
SYNGAP1-227ENST00000638142 PDCD1Q15116 288 aa17.35■□□□□ 0.37
SYNGAP1-227ENST00000638142 GGNQ86UU5 652 aa17.35■□□□□ 0.37
SYNGAP1-227ENST00000638142 SGCZQ96LD1 299 aa17.35■□□□□ 0.37
SYNGAP1-227ENST00000638142 YPEL4Q96NS1 127 aa17.35■□□□□ 0.37
SYNGAP1-227ENST00000638142 PARPBPQ9NWS1 579 aa17.35■□□□□ 0.37
SYNGAP1-227ENST00000638142 A0A1W2PPE2 198 aa17.35■□□□□ 0.37
SYNGAP1-227ENST00000638142 FAM90A10PA6NDY2 464 aa17.35■□□□□ 0.37
SYNGAP1-227ENST00000638142 FAM90A18PA6NE21 464 aa17.35■□□□□ 0.37
SYNGAP1-227ENST00000638142 FAM90A16PA6NEW6 464 aa17.35■□□□□ 0.37
SYNGAP1-227ENST00000638142 FAM24AA6NFZ4 105 aa17.35■□□□□ 0.37
SYNGAP1-227ENST00000638142 FAM90A20PA6NIJ5 464 aa17.35■□□□□ 0.37
SYNGAP1-227ENST00000638142 FAM90A8PA6NJQ4 464 aa17.35■□□□□ 0.37
SYNGAP1-227ENST00000638142 FAM90A7PA6NKC0 464 aa17.35■□□□□ 0.37
SYNGAP1-227ENST00000638142 FAM90A22PA8MWA6 464 aa17.35■□□□□ 0.37
SYNGAP1-227ENST00000638142 FAM90A12PA8MX19 464 aa17.35■□□□□ 0.37
SYNGAP1-227ENST00000638142 FAM90A5PA8MXJ8 464 aa17.35■□□□□ 0.37
SYNGAP1-227ENST00000638142 FAM90A23PA8MXZ1 464 aa17.35■□□□□ 0.37
SYNGAP1-227ENST00000638142 FAM90A15PP0C7V4 464 aa17.35■□□□□ 0.37
SYNGAP1-227ENST00000638142 FAM90A13PP0C7W8 464 aa17.35■□□□□ 0.37
SYNGAP1-227ENST00000638142 FAM90A14PP0C7W9 464 aa17.35■□□□□ 0.37
SYNGAP1-227ENST00000638142 FAM90A24PP0C7X0 464 aa17.35■□□□□ 0.37
SYNGAP1-227ENST00000638142 GNRHRP30968 328 aa17.35■□□□□ 0.37
SYNGAP1-227ENST00000638142 RND3P61587 244 aa17.35■□□□□ 0.37
SYNGAP1-227ENST00000638142 CEACAM16Q2WEN9 425 aa17.35■□□□□ 0.37
SYNGAP1-227ENST00000638142 SOHLH1Q5JUK2 328 aa17.35■□□□□ 0.37
SYNGAP1-227ENST00000638142 ZNF611Q8N823 705 aa17.35■□□□□ 0.37
SYNGAP1-227ENST00000638142 ZNF565Q8N9K5 539 aa17.35■□□□□ 0.37
SYNGAP1-227ENST00000638142 EDARADDQ8WWZ3 215 aa17.35■□□□□ 0.37
SYNGAP1-227ENST00000638142 SLC25A31Q9H0C2 315 aa17.35■□□□□ 0.37
SYNGAP1-227ENST00000638142 PLEKHF2Q9H8W4 249 aa17.35■□□□□ 0.37
SYNGAP1-227ENST00000638142 RPL36A-HNRNPH2H7BZ11 118 aa17.34■□□□□ 0.37
SYNGAP1-227ENST00000638142 PPIHO43447 177 aaKnown RBP17.34■□□□□ 0.37
SYNGAP1-227ENST00000638142 OR13C7P0DN81 318 aa17.34■□□□□ 0.37
SYNGAP1-227ENST00000638142 OR2B8PP59922 312 aa17.34■□□□□ 0.37
SYNGAP1-227ENST00000638142 DAZAP2Q15038 168 aaPredicted RBP17.34■□□□□ 0.37
SYNGAP1-227ENST00000638142 ABLIM2Q6H8Q1 611 aa17.34■□□□□ 0.37
SYNGAP1-227ENST00000638142 YRDCQ86U90 279 aaKnown RBP17.34■□□□□ 0.37
SYNGAP1-227ENST00000638142 CALHM1Q8IU99 346 aa17.34■□□□□ 0.37
SYNGAP1-227ENST00000638142 ZNF695Q8IW36 515 aa17.34■□□□□ 0.37
SYNGAP1-227ENST00000638142 SUMF2Q8NBJ7 301 aa17.34■□□□□ 0.37
SYNGAP1-227ENST00000638142 Q8NFD4 153 aa17.34■□□□□ 0.37
SYNGAP1-227ENST00000638142 OR2Y1Q8NGV0 311 aa17.34■□□□□ 0.37
SYNGAP1-227ENST00000638142 OR2G3Q8NGZ4 309 aa17.34■□□□□ 0.37
SYNGAP1-227ENST00000638142 SPSB4Q96A44 273 aa17.34■□□□□ 0.37
SYNGAP1-227ENST00000638142 CLDN23Q96B33 292 aa17.34■□□□□ 0.37
SYNGAP1-227ENST00000638142 PAPOLGQ9BWT3 736 aaKnown RBP17.34■□□□□ 0.37
SYNGAP1-227ENST00000638142 UBE2J1Q9Y385 318 aaPredicted RBP17.34■□□□□ 0.37
SYNGAP1-227ENST00000638142 IGSF23A1L1A6 192 aa17.33■□□□□ 0.37
SYNGAP1-227ENST00000638142 BTBD17A6NE02 478 aa17.33■□□□□ 0.37
SYNGAP1-227ENST00000638142 ATP6V0CP27449 155 aa17.33■□□□□ 0.37
SYNGAP1-227ENST00000638142 SRSF7Q16629 238 aaKnown RBP eCLIP17.33■□□□□ 0.37
SYNGAP1-227ENST00000638142 ZNF468Q5VIY5 522 aaPredicted RBP17.33■□□□□ 0.37
SYNGAP1-227ENST00000638142 WDR5BQ86VZ2 330 aa17.33■□□□□ 0.37
SYNGAP1-227ENST00000638142 UNKLQ9H9P5 680 aaKnown RBP17.33■□□□□ 0.37
SYNGAP1-227ENST00000638142 LYRM2Q9NU23 88 aaPredicted RBP17.33■□□□□ 0.37
SYNGAP1-227ENST00000638142 P4HTMQ9NXG6 502 aa17.33■□□□□ 0.37
SYNGAP1-227ENST00000638142 NOVA1P51513 510 aaKnown RBP17.33■□□□□ 0.36
SYNGAP1-227ENST00000638142 TRIM61Q5EBN2 209 aa17.33■□□□□ 0.36
SYNGAP1-227ENST00000638142 ACER2Q5QJU3 275 aa17.33■□□□□ 0.36
SYNGAP1-227ENST00000638142 SLC25A26Q70HW3 274 aa17.33■□□□□ 0.36
SYNGAP1-227ENST00000638142 TBC1D26Q86UD7 250 aa17.33■□□□□ 0.36
SYNGAP1-227ENST00000638142 FGFBP3Q8TAT2 258 aa17.33■□□□□ 0.36
SYNGAP1-227ENST00000638142 IFI44Q8TCB0 444 aa17.33■□□□□ 0.36
SYNGAP1-227ENST00000638142 SLC7A10Q9NS82 523 aa17.33■□□□□ 0.36
SYNGAP1-227ENST00000638142 DUXBA0A1W2PPF3 345 aa17.32■□□□□ 0.36
SYNGAP1-227ENST00000638142 MED19A0JLT2 244 aaPredicted RBP17.32■□□□□ 0.36
SYNGAP1-227ENST00000638142 HSPA12AO43301 675 aa17.32■□□□□ 0.36
SYNGAP1-227ENST00000638142 CXCL13O43927 109 aa17.32■□□□□ 0.36
SYNGAP1-227ENST00000638142 FBP1P09467 338 aa17.32■□□□□ 0.36
SYNGAP1-227ENST00000638142 EDN3P14138 238 aa17.32■□□□□ 0.36
SYNGAP1-227ENST00000638142 ASCL1P50553 236 aa17.32■□□□□ 0.36
SYNGAP1-227ENST00000638142 RPS23P62266 143 aaKnown RBP17.32■□□□□ 0.36
SYNGAP1-227ENST00000638142 TDHQ8IZJ6 230 aa17.32■□□□□ 0.36
SYNGAP1-227ENST00000638142 EXTL1Q92935 676 aa17.32■□□□□ 0.36
SYNGAP1-227ENST00000638142 C1QTNF5Q9BXJ0 243 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms