RNA–Protein interactions for RNA: ENST00000637212.1

LINC00643-207, long intergenic non-protein coding RNA 643, humanhuman

BASIC

Gene LINC00643, Length 734 nt, Biotype transcribed unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-207ENST00000637212 GNG2P59768 71 aa11.19□□□□□ -0.62
LINC00643-207ENST00000637212 MRPS15P82914 257 aaKnown RBP11.19□□□□□ -0.62
LINC00643-207ENST00000637212 PAX5Q02548 391 aa11.19□□□□□ -0.62
LINC00643-207ENST00000637212 ARFRP1Q13795 201 aa11.19□□□□□ -0.62
LINC00643-207ENST00000637212 ZMYND11Q15326 602 aa11.19□□□□□ -0.62
LINC00643-207ENST00000637212 SRSF7Q16629 238 aaKnown RBP eCLIP11.19□□□□□ -0.62
LINC00643-207ENST00000637212 TMEM155Q4W5P6 130 aa11.19□□□□□ -0.62
LINC00643-207ENST00000637212 PAN3Q58A45 887 aaKnown RBP11.19□□□□□ -0.62
LINC00643-207ENST00000637212 MUC20Q8N307 709 aaPredicted RBP11.19□□□□□ -0.62
LINC00643-207ENST00000637212 OR52I2Q8NH67 350 aa11.19□□□□□ -0.62
LINC00643-207ENST00000637212 CHST6Q9GZX3 395 aa11.19□□□□□ -0.62
LINC00643-207ENST00000637212 LIME1Q9H400 295 aa11.19□□□□□ -0.62
LINC00643-207ENST00000637212 NCOR1P1Q9H4R4 102 aa11.19□□□□□ -0.62
LINC00643-207ENST00000637212 PALMDQ9NP74 551 aa11.19□□□□□ -0.62
LINC00643-207ENST00000637212 BEX4Q9NWD9 120 aaPredicted RBP11.19□□□□□ -0.62
LINC00643-207ENST00000637212 MTFP1Q9UDX5 166 aa11.19□□□□□ -0.62
LINC00643-207ENST00000637212 ZNF107Q9UII5 783 aaPredicted RBP11.19□□□□□ -0.62
LINC00643-207ENST00000637212 RBMX2Q9Y388 322 aaKnown RBP11.19□□□□□ -0.62
LINC00643-207ENST00000637212 TRBV6-6A0A0A6YYG2 114 aa11.18□□□□□ -0.62
LINC00643-207ENST00000637212 TMEM82A0PJX8 343 aa11.18□□□□□ -0.62
LINC00643-207ENST00000637212 UBE2QL1A1L167 161 aa11.18□□□□□ -0.62
LINC00643-207ENST00000637212 TMEM235A6NFC5 223 aa11.18□□□□□ -0.62
LINC00643-207ENST00000637212 NKX6-3A6NJ46 265 aa11.18□□□□□ -0.62
LINC00643-207ENST00000637212 J3QRK9 145 aa11.18□□□□□ -0.62
LINC00643-207ENST00000637212 K7N7A8 449 aa11.18□□□□□ -0.62
LINC00643-207ENST00000637212 MGST3O14880 152 aa11.18□□□□□ -0.62
LINC00643-207ENST00000637212 SIGLEC5O15389 551 aa11.18□□□□□ -0.62
LINC00643-207ENST00000637212 PPIHO43447 177 aaKnown RBP11.18□□□□□ -0.62
LINC00643-207ENST00000637212 ORC5O43913 435 aa11.18□□□□□ -0.62
LINC00643-207ENST00000637212 PSPNO60542 156 aa11.18□□□□□ -0.62
LINC00643-207ENST00000637212 NDUFS7O75251 213 aa11.18□□□□□ -0.62
LINC00643-207ENST00000637212 ZNF737O75373 536 aa11.18□□□□□ -0.62
LINC00643-207ENST00000637212 UPK1BO75841 260 aa11.18□□□□□ -0.62
LINC00643-207ENST00000637212 ZNF205O95201 554 aa11.18□□□□□ -0.62
LINC00643-207ENST00000637212 IGHV4-39P01824 125 aa11.18□□□□□ -0.62
LINC00643-207ENST00000637212 GYPAP02724 150 aa11.18□□□□□ -0.62
LINC00643-207ENST00000637212 CSN2P05814 226 aa11.18□□□□□ -0.62
LINC00643-207ENST00000637212 CSF3P09919 207 aa11.18□□□□□ -0.62
LINC00643-207ENST00000637212 AMY2BP19961 511 aa11.18□□□□□ -0.62
LINC00643-207ENST00000637212 DTYMKP23919 212 aa11.18□□□□□ -0.62
LINC00643-207ENST00000637212 PDLIM4P50479 330 aa11.18□□□□□ -0.62
LINC00643-207ENST00000637212 DSCR9P59020 149 aa11.18□□□□□ -0.62
LINC00643-207ENST00000637212 DGCR2P98153 550 aa11.18□□□□□ -0.62
LINC00643-207ENST00000637212 HOXA4Q00056 320 aaPredicted RBP11.18□□□□□ -0.62
LINC00643-207ENST00000637212 MADCAM1Q13477 382 aa11.18□□□□□ -0.62
LINC00643-207ENST00000637212 BAK1Q16611 211 aa11.18□□□□□ -0.62
LINC00643-207ENST00000637212 OLFML2AQ68BL7 652 aa11.18□□□□□ -0.62
LINC00643-207ENST00000637212 BRICD5Q6PL45 260 aa11.18□□□□□ -0.62
LINC00643-207ENST00000637212 C17orf107Q6ZR85 190 aa11.18□□□□□ -0.62
LINC00643-207ENST00000637212 DCDC5Q6ZRR9 648 aa11.18□□□□□ -0.62
LINC00643-207ENST00000637212 SLC36A1Q7Z2H8 476 aa11.18□□□□□ -0.62
LINC00643-207ENST00000637212 OR8H2Q8N162 312 aa11.18□□□□□ -0.62
LINC00643-207ENST00000637212 GAPTQ8N292 157 aa11.18□□□□□ -0.62
LINC00643-207ENST00000637212 BPIFB2Q8N4F0 458 aa11.18□□□□□ -0.62
LINC00643-207ENST00000637212 C19orf18Q8NEA5 215 aa11.18□□□□□ -0.62
LINC00643-207ENST00000637212 ZFAND2BQ8WV99 257 aa11.18□□□□□ -0.62
LINC00643-207ENST00000637212 MBD6Q96DN6 1003 aa11.18□□□□□ -0.62
LINC00643-207ENST00000637212 CMSS1Q9BQ75 279 aaKnown RBP11.18□□□□□ -0.62
LINC00643-207ENST00000637212 TMEM246Q9BRR3 403 aa11.18□□□□□ -0.62
LINC00643-207ENST00000637212 SHARPINQ9H0F6 387 aa11.18□□□□□ -0.62
LINC00643-207ENST00000637212 ETAA1Q9NY74 926 aa11.18□□□□□ -0.62
LINC00643-207ENST00000637212 TAS2R8Q9NYW2 309 aa11.18□□□□□ -0.62
LINC00643-207ENST00000637212 AK3Q9UIJ7 227 aa11.18□□□□□ -0.62
LINC00643-207ENST00000637212 ELF5Q9UKW6 265 aaPredicted RBP11.18□□□□□ -0.62
LINC00643-207ENST00000637212 MAB21L2Q9Y586 359 aa11.18□□□□□ -0.62
LINC00643-207ENST00000637212 MEIOCA2RUB1 952 aa11.17□□□□□ -0.62
LINC00643-207ENST00000637212 FUOMA2VDF0 154 aa11.17□□□□□ -0.62
LINC00643-207ENST00000637212 NDUFS8O00217 210 aa11.17□□□□□ -0.62
LINC00643-207ENST00000637212 SSX5O60225 188 aa11.17□□□□□ -0.62
LINC00643-207ENST00000637212 LY6HO94772 140 aa11.17□□□□□ -0.62
LINC00643-207ENST00000637212 ECDO95905 644 aaPredicted RBP11.17□□□□□ -0.62
LINC00643-207ENST00000637212 MT-ND4P03905 459 aa11.17□□□□□ -0.62
LINC00643-207ENST00000637212 TK1P04183 234 aa11.17□□□□□ -0.62
LINC00643-207ENST00000637212 PTHLHP12272 177 aa11.17□□□□□ -0.62
LINC00643-207ENST00000637212 IL7P13232 177 aa11.17□□□□□ -0.62
LINC00643-207ENST00000637212 NAT1P18440 290 aa11.17□□□□□ -0.62
LINC00643-207ENST00000637212 DNASE1P24855 282 aa11.17□□□□□ -0.62
LINC00643-207ENST00000637212 ERP29P30040 261 aaKnown RBP11.17□□□□□ -0.62
LINC00643-207ENST00000637212 RBMXP38159 391 aaKnown RBP11.17□□□□□ -0.62
LINC00643-207ENST00000637212 GPR6P46095 362 aaPredicted RBP11.17□□□□□ -0.62
LINC00643-207ENST00000637212 CEBPDP49716 269 aaPredicted RBP11.17□□□□□ -0.62
LINC00643-207ENST00000637212 ATP5J2P56134 94 aa11.17□□□□□ -0.62
LINC00643-207ENST00000637212 KRTAP10-9P60411 292 aa11.17□□□□□ -0.62
LINC00643-207ENST00000637212 IL13RA1P78552 427 aa11.17□□□□□ -0.62
LINC00643-207ENST00000637212 DCTN2Q13561 401 aaKnown RBP11.17□□□□□ -0.62
LINC00643-207ENST00000637212 SLC35E4Q6ICL7 350 aa11.17□□□□□ -0.62
LINC00643-207ENST00000637212 C16orf87Q6PH81 154 aa11.17□□□□□ -0.62
LINC00643-207ENST00000637212 ZNF497Q6ZNH5 498 aa11.17□□□□□ -0.62
LINC00643-207ENST00000637212 HOGA1Q86XE5 327 aa11.17□□□□□ -0.62
LINC00643-207ENST00000637212 LRRC75A-AS1Q8N1F1 130 aa11.17□□□□□ -0.62
LINC00643-207ENST00000637212 OR4S1Q8NGB4 309 aa11.17□□□□□ -0.62
LINC00643-207ENST00000637212 DEDD2Q8WXF8 326 aa11.17□□□□□ -0.62
LINC00643-207ENST00000637212 NINJ1Q92982 152 aa11.17□□□□□ -0.62
LINC00643-207ENST00000637212 GAFA1Q96PS6 74 aa11.17□□□□□ -0.62
LINC00643-207ENST00000637212 CCL13Q99616 98 aa11.17□□□□□ -0.62
LINC00643-207ENST00000637212 C12orf4Q9NQ89 552 aa11.17□□□□□ -0.62
LINC00643-207ENST00000637212 MIOXQ9UGB7 285 aa11.17□□□□□ -0.62
LINC00643-207ENST00000637212 ANAPC10Q9UM13 185 aa11.17□□□□□ -0.62
LINC00643-207ENST00000637212 RAI1Q7Z5J4 1906 aaPredicted RBP11.17□□□□□ -0.62
LINC00643-207ENST00000637212 ISPDA4D126 451 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms