RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 PUDPQ08623 228 aa4.09□□□□□ -1.76
LINC00550-201ENST00000629293 MFSD13AQ14CX5 517 aa4.09□□□□□ -1.76
LINC00550-201ENST00000629293 KCTD18Q6PI47 426 aaPredicted RBP4.09□□□□□ -1.76
LINC00550-201ENST00000629293 MDP1Q86V88 176 aa4.09□□□□□ -1.76
LINC00550-201ENST00000629293 ZIC4Q8N9L1 334 aa4.09□□□□□ -1.76
LINC00550-201ENST00000629293 OR1K1Q8NGR3 316 aa4.09□□□□□ -1.76
LINC00550-201ENST00000629293 OR2T35Q8NGX2 323 aa4.09□□□□□ -1.76
LINC00550-201ENST00000629293 OR6N1Q8NGY5 312 aa4.09□□□□□ -1.76
LINC00550-201ENST00000629293 GPX8Q8TED1 209 aa4.09□□□□□ -1.76
LINC00550-201ENST00000629293 FAM3DQ96BQ1 224 aa4.09□□□□□ -1.76
LINC00550-201ENST00000629293 KCNK15Q9H427 330 aa4.09□□□□□ -1.76
LINC00550-201ENST00000629293 UNKLQ9H9P5 680 aaKnown RBP4.09□□□□□ -1.76
LINC00550-201ENST00000629293 SCPEP1Q9HB40 452 aa4.09□□□□□ -1.76
LINC00550-201ENST00000629293 LIN7CQ9NUP9 197 aaKnown RBP4.09□□□□□ -1.76
LINC00550-201ENST00000629293 TAS2R8Q9NYW2 309 aa4.09□□□□□ -1.76
LINC00550-201ENST00000629293 MGAT4CQ9UBM8 478 aa4.09□□□□□ -1.76
LINC00550-201ENST00000629293 IGKV1D-43A0A0B4J1Z2 117 aa4.08□□□□□ -1.76
LINC00550-201ENST00000629293 PLSCR5A0PG75 271 aa4.08□□□□□ -1.76
LINC00550-201ENST00000629293 LIPT2A6NK58 231 aa4.08□□□□□ -1.76
LINC00550-201ENST00000629293 B4DSR2 109 aa4.08□□□□□ -1.76
LINC00550-201ENST00000629293 MPZL1O95297 269 aa4.08□□□□□ -1.76
LINC00550-201ENST00000629293 PATE4P0C8F1 98 aa4.08□□□□□ -1.76
LINC00550-201ENST00000629293 ACHEP22303 614 aa4.08□□□□□ -1.76
LINC00550-201ENST00000629293 TIRAPP58753 221 aa4.08□□□□□ -1.76
LINC00550-201ENST00000629293 RPL15P61313 204 aaKnown RBP4.08□□□□□ -1.76
LINC00550-201ENST00000629293 RIPPLY1Q0D2K3 151 aa4.08□□□□□ -1.76
LINC00550-201ENST00000629293 EIF2B1Q14232 305 aaKnown RBP4.08□□□□□ -1.76
LINC00550-201ENST00000629293 RBMS2Q15434 407 aaKnown RBP4.08□□□□□ -1.76
LINC00550-201ENST00000629293 ODF4Q2M2E3 257 aa4.08□□□□□ -1.76
LINC00550-201ENST00000629293 C2orf76Q3KRA6 126 aa4.08□□□□□ -1.76
LINC00550-201ENST00000629293 C1orf100Q5SVJ3 147 aa4.08□□□□□ -1.76
LINC00550-201ENST00000629293 DEGS2Q6QHC5 323 aa4.08□□□□□ -1.76
LINC00550-201ENST00000629293 ELMOD2Q8IZ81 293 aa4.08□□□□□ -1.76
LINC00550-201ENST00000629293 OR8H1Q8NGG4 311 aa4.08□□□□□ -1.76
LINC00550-201ENST00000629293 OR4D10Q8NGI6 311 aa4.08□□□□□ -1.76
LINC00550-201ENST00000629293 TAF15Q92804 592 aaKnown RBP eCLIP4.08□□□□□ -1.76
LINC00550-201ENST00000629293 TMEM186Q96B77 213 aa4.08□□□□□ -1.76
LINC00550-201ENST00000629293 TAS2R4Q9NYW5 299 aa4.08□□□□□ -1.76
LINC00550-201ENST00000629293 DHDHQ9UQ10 334 aa4.08□□□□□ -1.76
LINC00550-201ENST00000629293 IGHV2OR16-5A0A0B4J2B6 119 aa4.08□□□□□ -1.76
LINC00550-201ENST00000629293 LOC107986453A0A1B0GWG9 222 aa4.08□□□□□ -1.76
LINC00550-201ENST00000629293 FAM157AC9JC47 383 aa4.08□□□□□ -1.76
LINC00550-201ENST00000629293 IFNL4K9M1U5 179 aa4.08□□□□□ -1.76
LINC00550-201ENST00000629293 SULT1C2O00338 296 aa4.08□□□□□ -1.76
LINC00550-201ENST00000629293 ADAM20O43506 726 aa4.08□□□□□ -1.76
LINC00550-201ENST00000629293 CREBL2O60519 120 aaPredicted RBP4.08□□□□□ -1.76
LINC00550-201ENST00000629293 NOS1APO75052 506 aaPredicted RBP4.08□□□□□ -1.76
LINC00550-201ENST00000629293 RBBP9O75884 186 aa4.08□□□□□ -1.76
LINC00550-201ENST00000629293 OR6A2O95222 327 aa4.08□□□□□ -1.76
LINC00550-201ENST00000629293 HLA-DQA2P01906 255 aa4.08□□□□□ -1.76
LINC00550-201ENST00000629293 MBPP02686 304 aaPredicted RBP4.08□□□□□ -1.76
LINC00550-201ENST00000629293 B4GALT1P15291 398 aa4.08□□□□□ -1.76
LINC00550-201ENST00000629293 COL8A2P25067 703 aa4.08□□□□□ -1.76
LINC00550-201ENST00000629293 FAUP35544 74 aaKnown RBP4.08□□□□□ -1.76
LINC00550-201ENST00000629293 DAP3P51398 398 aaKnown RBP4.08□□□□□ -1.76
LINC00550-201ENST00000629293 CCL8P80075 99 aa4.08□□□□□ -1.76
LINC00550-201ENST00000629293 H3F3AP84243 136 aa4.08□□□□□ -1.76
LINC00550-201ENST00000629293 FMODQ06828 376 aa4.08□□□□□ -1.76
LINC00550-201ENST00000629293 PCGF3Q3KNV8 242 aa4.08□□□□□ -1.76
LINC00550-201ENST00000629293 ESCO2Q56NI9 601 aa4.08□□□□□ -1.76
LINC00550-201ENST00000629293 CLLU1Q5K131 121 aa4.08□□□□□ -1.76
LINC00550-201ENST00000629293 ZNF813Q6ZN06 617 aa4.08□□□□□ -1.76
LINC00550-201ENST00000629293 PEG10Q86TG7 708 aaKnown RBP4.08□□□□□ -1.76
LINC00550-201ENST00000629293 ADPRHL1Q8NDY3 354 aa4.08□□□□□ -1.76
LINC00550-201ENST00000629293 OR6M1Q8NGM8 313 aa4.08□□□□□ -1.76
LINC00550-201ENST00000629293 CLDND2Q8NHS1 167 aa4.08□□□□□ -1.76
LINC00550-201ENST00000629293 RNF133Q8WVZ7 376 aa4.08□□□□□ -1.76
LINC00550-201ENST00000629293 PTX4Q96A99 478 aa4.08□□□□□ -1.76
LINC00550-201ENST00000629293 RBP7Q96R05 134 aa4.08□□□□□ -1.76
LINC00550-201ENST00000629293 MRPL37Q9BZE1 423 aaKnown RBP4.08□□□□□ -1.76
LINC00550-201ENST00000629293 C1orf198Q9H425 327 aa4.08□□□□□ -1.76
LINC00550-201ENST00000629293 GPN1Q9HCN4 374 aaPredicted RBP4.08□□□□□ -1.76
LINC00550-201ENST00000629293 B3GAT1Q9P2W7 334 aa4.08□□□□□ -1.76
LINC00550-201ENST00000629293 EIF3KQ9UBQ5 218 aaKnown RBP4.08□□□□□ -1.76
LINC00550-201ENST00000629293 A0A0A6YYH2 397 aa4.08□□□□□ -1.76
LINC00550-201ENST00000629293 A6NJ64 397 aa4.08□□□□□ -1.76
LINC00550-201ENST00000629293 H3BSH0 61 aa4.08□□□□□ -1.76
LINC00550-201ENST00000629293 AKAIN1P0CW23 69 aa4.08□□□□□ -1.76
LINC00550-201ENST00000629293 CCL2P13500 99 aa4.08□□□□□ -1.76
LINC00550-201ENST00000629293 CCNOP22674 350 aa4.08□□□□□ -1.76
LINC00550-201ENST00000629293 ZNF81P51508 661 aa4.08□□□□□ -1.76
LINC00550-201ENST00000629293 P2RY4P51582 365 aa4.08□□□□□ -1.76
LINC00550-201ENST00000629293 EXOSC2Q13868 293 aaKnown RBP4.08□□□□□ -1.76
LINC00550-201ENST00000629293 DNM1P34Q6PK57 102 aa4.08□□□□□ -1.76
LINC00550-201ENST00000629293 LRP11Q86VZ4 500 aa4.08□□□□□ -1.76
LINC00550-201ENST00000629293 CDH26Q8IXH8 852 aa4.08□□□□□ -1.76
LINC00550-201ENST00000629293 BPIFB2Q8N4F0 458 aa4.08□□□□□ -1.76
LINC00550-201ENST00000629293 OR51A2Q8NGJ7 313 aa4.08□□□□□ -1.76
LINC00550-201ENST00000629293 BCL2L2Q92843 193 aaPredicted RBP4.08□□□□□ -1.76
LINC00550-201ENST00000629293 C1QTNF5Q9BXJ0 243 aa4.08□□□□□ -1.76
LINC00550-201ENST00000629293 MYOZ1Q9NP98 299 aaPredicted RBP4.08□□□□□ -1.76
LINC00550-201ENST00000629293 DECR2Q9NUI1 292 aa4.08□□□□□ -1.76
LINC00550-201ENST00000629293 FAM206AQ9NX38 181 aa4.08□□□□□ -1.76
LINC00550-201ENST00000629293 ZNF107Q9UII5 783 aaPredicted RBP4.08□□□□□ -1.76
LINC00550-201ENST00000629293 HHLA2Q9UM44 414 aa4.08□□□□□ -1.76
LINC00550-201ENST00000629293 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.08□□□□□ -1.76
LINC00550-201ENST00000629293 TRAV18A0A075B6X5 111 aa4.07□□□□□ -1.76
LINC00550-201ENST00000629293 TSC22D2O75157 780 aa4.07□□□□□ -1.76
LINC00550-201ENST00000629293 CFDP00746 253 aaPredicted RBP4.07□□□□□ -1.76
LINC00550-201ENST00000629293 CD74P04233 296 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms