RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 NEK7Q8TDX7 302 aa18.78■□□□□ 0.6
PNKP-220ENST00000627232 ABHD17AQ96GS6 310 aa18.78■□□□□ 0.6
PNKP-220ENST00000627232 TMEM100Q9NV29 134 aa18.78■□□□□ 0.6
PNKP-220ENST00000627232 C1orf123Q9NWV4 160 aa18.78■□□□□ 0.6
PNKP-220ENST00000627232 IGHV1-18A0A0C4DH31 117 aa18.77■□□□□ 0.6
PNKP-220ENST00000627232 C13orf42A0A1B0GVH6 325 aa18.77■□□□□ 0.6
PNKP-220ENST00000627232 CTXN2P0C2S0 81 aa18.77■□□□□ 0.6
PNKP-220ENST00000627232 PSMB6P28072 239 aa18.77■□□□□ 0.6
PNKP-220ENST00000627232 HERV-K104P61576 105 aa18.77■□□□□ 0.6
PNKP-220ENST00000627232 SLC38A6Q8IZM9 456 aa18.77■□□□□ 0.6
PNKP-220ENST00000627232 OR8H3Q8N146 312 aa18.77■□□□□ 0.6
PNKP-220ENST00000627232 RDH8Q9NYR8 311 aa18.77■□□□□ 0.6
PNKP-220ENST00000627232 TRAV24A0A0B4J272 114 aa18.76■□□□□ 0.59
PNKP-220ENST00000627232 TEX13DA0A0J9YY54 714 aaPredicted RBP18.76■□□□□ 0.59
PNKP-220ENST00000627232 TRDCB7Z8K6 153 aa18.76■□□□□ 0.59
PNKP-220ENST00000627232 SLC34A2O95436 690 aa18.76■□□□□ 0.59
PNKP-220ENST00000627232 PGA5P0DJD9 388 aa18.76■□□□□ 0.59
PNKP-220ENST00000627232 PIGPP57054 158 aa18.76■□□□□ 0.59
PNKP-220ENST00000627232 ZNF718Q3SXZ3 478 aa18.76■□□□□ 0.59
PNKP-220ENST00000627232 ABCA11PQ4W5N1 156 aa18.76■□□□□ 0.59
PNKP-220ENST00000627232 CLLU1Q5K131 121 aa18.76■□□□□ 0.59
PNKP-220ENST00000627232 TIMM23BQ5SRD1 257 aa18.76■□□□□ 0.59
PNKP-220ENST00000627232 MBNL2Q5VZF2 373 aaKnown RBP18.76■□□□□ 0.59
PNKP-220ENST00000627232 Q6P435 159 aa18.76■□□□□ 0.59
PNKP-220ENST00000627232 KCNRGQ8N5I3 272 aa18.76■□□□□ 0.59
PNKP-220ENST00000627232 TOMM40LQ969M1 308 aa18.76■□□□□ 0.59
PNKP-220ENST00000627232 GALNT14Q96FL9 552 aa18.76■□□□□ 0.59
PNKP-220ENST00000627232 C2orf50Q96LR7 162 aa18.76■□□□□ 0.59
PNKP-220ENST00000627232 LUZP4Q9P127 313 aa18.76■□□□□ 0.59
PNKP-220ENST00000627232 TP53TG5Q9Y2B4 290 aa18.76■□□□□ 0.59
PNKP-220ENST00000627232 KCNIP3Q9Y2W7 256 aa18.76■□□□□ 0.59
PNKP-220ENST00000627232 LINC00862A6NCI5 91 aa18.75■□□□□ 0.59
PNKP-220ENST00000627232 DEGS1O15121 323 aa18.75■□□□□ 0.59
PNKP-220ENST00000627232 DUSP1P28562 367 aa18.75■□□□□ 0.59
PNKP-220ENST00000627232 MDH2P40926 338 aaKnown RBP18.75■□□□□ 0.59
PNKP-220ENST00000627232 ZNF154Q13106 437 aa18.75■□□□□ 0.59
PNKP-220ENST00000627232 LRRC37A5PQ49AS3 106 aa18.75■□□□□ 0.59
PNKP-220ENST00000627232 ZNF880Q6PDB4 577 aa18.75■□□□□ 0.59
PNKP-220ENST00000627232 ZNF474Q6S9Z5 364 aaPredicted RBP18.75■□□□□ 0.59
PNKP-220ENST00000627232 SPERTQ8NA61 448 aa18.75■□□□□ 0.59
PNKP-220ENST00000627232 MRPL30Q8TCC3 161 aaKnown RBP18.75■□□□□ 0.59
PNKP-220ENST00000627232 VRK1Q99986 396 aaPredicted RBP18.75■□□□□ 0.59
PNKP-220ENST00000627232 NRIP2Q9BQI9 281 aa18.75■□□□□ 0.59
PNKP-220ENST00000627232 RSRP1Q9BUV0 290 aa18.75■□□□□ 0.59
PNKP-220ENST00000627232 CXXC4Q9H2H0 198 aa18.75■□□□□ 0.59
PNKP-220ENST00000627232 METTL8Q9H825 291 aaKnown RBP18.75■□□□□ 0.59
PNKP-220ENST00000627232 ATP23Q9Y6H3 246 aa18.75■□□□□ 0.59
PNKP-220ENST00000627232 CEP250Q9BV73 2442 aa18.75■□□□□ 0.59
PNKP-220ENST00000627232 TRBV6-7A0A0A0MS04 114 aa18.74■□□□□ 0.59
PNKP-220ENST00000627232 K7ENP7 123 aa18.74■□□□□ 0.59
PNKP-220ENST00000627232 ADAP1O75689 374 aa18.74■□□□□ 0.59
PNKP-220ENST00000627232 B3GALNT1O75752 331 aa18.74■□□□□ 0.59
PNKP-220ENST00000627232 PPYP01298 95 aa18.74■□□□□ 0.59
PNKP-220ENST00000627232 AADACP22760 399 aa18.74■□□□□ 0.59
PNKP-220ENST00000627232 GCH1P30793 250 aa18.74■□□□□ 0.59
PNKP-220ENST00000627232 FXYD4P59646 89 aa18.74■□□□□ 0.59
PNKP-220ENST00000627232 TBR1Q16650 682 aa18.74■□□□□ 0.59
PNKP-220ENST00000627232 SHEQ5VZ18 495 aa18.74■□□□□ 0.59
PNKP-220ENST00000627232 ACOT7LQ6ZUV0 252 aa18.74■□□□□ 0.59
PNKP-220ENST00000627232 SLC51BQ86UW2 128 aa18.74■□□□□ 0.59
PNKP-220ENST00000627232 RPRMLQ8N4K4 120 aa18.74■□□□□ 0.59
PNKP-220ENST00000627232 CCDC71LQ8N9Z2 235 aa18.74■□□□□ 0.59
PNKP-220ENST00000627232 SYT3Q9BQG1 590 aa18.74■□□□□ 0.59
PNKP-220ENST00000627232 SUCNR1Q9BXA5 334 aa18.74■□□□□ 0.59
PNKP-220ENST00000627232 NAA60Q9H7X0 242 aa18.74■□□□□ 0.59
PNKP-220ENST00000627232 TREM2Q9NZC2 230 aa18.74■□□□□ 0.59
PNKP-220ENST00000627232 DMXL1Q9Y485 3027 aa18.74■□□□□ 0.59
PNKP-220ENST00000627232 DIRAS3O95661 229 aa18.74■□□□□ 0.59
PNKP-220ENST00000627232 SPIN3Q5JUX0 258 aa18.74■□□□□ 0.59
PNKP-220ENST00000627232 PRR13Q9NZ81 148 aa18.74■□□□□ 0.59
PNKP-220ENST00000627232 MEMO1Q9Y316 297 aa18.74■□□□□ 0.59
PNKP-220ENST00000627232 MSRB2Q9Y3D2 182 aa18.74■□□□□ 0.59
PNKP-220ENST00000627232 A0A1B0GWJ7 208 aa18.73■□□□□ 0.59
PNKP-220ENST00000627232 RPS10-NUDT3A0A1W2PQS6 291 aa18.73■□□□□ 0.59
PNKP-220ENST00000627232 ANKRD34BA5PLL1 514 aa18.73■□□□□ 0.59
PNKP-220ENST00000627232 H0YL77 283 aa18.73■□□□□ 0.59
PNKP-220ENST00000627232 H7C1Q1 480 aa18.73■□□□□ 0.59
PNKP-220ENST00000627232 CDIPTO14735 213 aa18.73■□□□□ 0.59
PNKP-220ENST00000627232 MLNRO43193 412 aa18.73■□□□□ 0.59
PNKP-220ENST00000627232 TIMM8AO60220 97 aaPredicted RBP18.73■□□□□ 0.59
PNKP-220ENST00000627232 TK1P04183 234 aa18.73■□□□□ 0.59
PNKP-220ENST00000627232 TDGF1P3P51864 188 aa18.73■□□□□ 0.59
PNKP-220ENST00000627232 RAB14P61106 215 aa18.73■□□□□ 0.59
PNKP-220ENST00000627232 NAAAQ02083 359 aa18.73■□□□□ 0.59
PNKP-220ENST00000627232 NHLH1Q02575 133 aa18.73■□□□□ 0.59
PNKP-220ENST00000627232 IGFBP7Q16270 282 aa18.73■□□□□ 0.59
PNKP-220ENST00000627232 IGSF11Q5DX21 431 aa18.73■□□□□ 0.59
PNKP-220ENST00000627232 FIP1L1Q6UN15 594 aaKnown RBP18.73■□□□□ 0.59
PNKP-220ENST00000627232 FAM185AQ8N0U4 392 aa18.73■□□□□ 0.59
PNKP-220ENST00000627232 POC1AQ8NBT0 407 aa18.73■□□□□ 0.59
PNKP-220ENST00000627232 RTN4IP1Q8WWV3 396 aaPredicted RBP18.73■□□□□ 0.59
PNKP-220ENST00000627232 RDH5Q92781 318 aa18.73■□□□□ 0.59
PNKP-220ENST00000627232 GSX2Q9BZM3 304 aa18.73■□□□□ 0.59
PNKP-220ENST00000627232 RASL12Q9NYN1 266 aa18.73■□□□□ 0.59
PNKP-220ENST00000627232 MBD2Q9UBB5 411 aa18.73■□□□□ 0.59
PNKP-220ENST00000627232 TINAGQ9UJW2 476 aa18.73■□□□□ 0.59
PNKP-220ENST00000627232 RNF222A6NCQ9 220 aa18.72■□□□□ 0.59
PNKP-220ENST00000627232 HSPB6O14558 160 aa18.72■□□□□ 0.59
PNKP-220ENST00000627232 HS3ST1O14792 307 aa18.72■□□□□ 0.59
PNKP-220ENST00000627232 NXPH2O95156 264 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms