RNA–Protein interactions for RNA: ENST00000624953.1

CDKL5-208, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 567 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-208ENST00000624953 C4orf33Q8N1A6 199 aa2.3□□□□□ -2.04
CDKL5-208ENST00000624953 C11orf42Q8N5U0 333 aa2.3□□□□□ -2.04
CDKL5-208ENST00000624953 NATD1Q8N6N6 113 aa2.3□□□□□ -2.04
CDKL5-208ENST00000624953 MINDY2Q8NBR6 621 aa2.3□□□□□ -2.04
CDKL5-208ENST00000624953 OR8J1Q8NGP2 316 aa2.3□□□□□ -2.04
CDKL5-208ENST00000624953 OR5J2Q8NH18 312 aa2.3□□□□□ -2.04
CDKL5-208ENST00000624953 ACMSDQ8TDX5 336 aa2.3□□□□□ -2.04
CDKL5-208ENST00000624953 HAVCR1Q96D42 359 aa2.3□□□□□ -2.04
CDKL5-208ENST00000624953 PPP1R36Q96LQ0 422 aa2.3□□□□□ -2.04
CDKL5-208ENST00000624953 TECTBQ96PL2 329 aa2.3□□□□□ -2.04
CDKL5-208ENST00000624953 NEDD4LQ96PU5 975 aa2.3□□□□□ -2.04
CDKL5-208ENST00000624953 SSX3Q99909 188 aa2.3□□□□□ -2.04
CDKL5-208ENST00000624953 ATF6BQ99941 703 aa2.3□□□□□ -2.04
CDKL5-208ENST00000624953 PRSS27Q9BQR3 290 aa2.3□□□□□ -2.04
CDKL5-208ENST00000624953 ZNF426Q9BUY5 554 aa2.3□□□□□ -2.04
CDKL5-208ENST00000624953 PAPOLGQ9BWT3 736 aaKnown RBP2.3□□□□□ -2.04
CDKL5-208ENST00000624953 CDCA4Q9BXL8 241 aa2.3□□□□□ -2.04
CDKL5-208ENST00000624953 GON7Q9BXV9 100 aa2.3□□□□□ -2.04
CDKL5-208ENST00000624953 DPY30Q9C005 99 aa2.3□□□□□ -2.04
CDKL5-208ENST00000624953 C1orf198Q9H425 327 aa2.3□□□□□ -2.04
CDKL5-208ENST00000624953 RIMS4Q9H426 269 aaPredicted RBP2.3□□□□□ -2.04
CDKL5-208ENST00000624953 IKZF5Q9H5V7 419 aa2.3□□□□□ -2.04
CDKL5-208ENST00000624953 WDR76Q9H967 626 aa2.3□□□□□ -2.04
CDKL5-208ENST00000624953 NANOGQ9H9S0 305 aa2.3□□□□□ -2.04
CDKL5-208ENST00000624953 C12orf10Q9HB07 376 aa2.3□□□□□ -2.04
CDKL5-208ENST00000624953 SLCO1B3Q9NPD5 702 aa2.3□□□□□ -2.04
CDKL5-208ENST00000624953 B3GAT2Q9NPZ5 323 aa2.3□□□□□ -2.04
CDKL5-208ENST00000624953 MEPEQ9NQ76 525 aaPredicted RBP2.3□□□□□ -2.04
CDKL5-208ENST00000624953 ADA2Q9NZK5 511 aa2.3□□□□□ -2.04
CDKL5-208ENST00000624953 DCDC2Q9UHG0 476 aa2.3□□□□□ -2.04
CDKL5-208ENST00000624953 PYCARDQ9ULZ3 195 aa2.3□□□□□ -2.04
CDKL5-208ENST00000624953 UTP11Q9Y3A2 253 aaKnown RBP2.3□□□□□ -2.04
CDKL5-208ENST00000624953 MAB21L2Q9Y586 359 aa2.3□□□□□ -2.04
CDKL5-208ENST00000624953 HERC1Q15751 4861 aa2.3□□□□□ -2.04
CDKL5-208ENST00000624953 DNAH17Q9UFH2 4485 aa2.29□□□□□ -2.04
CDKL5-208ENST00000624953 IGHV3OR15-7A0A075B7D8 119 aa2.29□□□□□ -2.04
CDKL5-208ENST00000624953 IGHV3-16A0A0C4DH30 117 aa2.29□□□□□ -2.04
CDKL5-208ENST00000624953 A0A0U1RRA0 63 aa2.29□□□□□ -2.04
CDKL5-208ENST00000624953 hCG_38984A0A1B0GV85 526 aa2.29□□□□□ -2.04
CDKL5-208ENST00000624953 ZNF726A6NNF4 738 aa2.29□□□□□ -2.04
CDKL5-208ENST00000624953 IQCF6A8MYZ5 107 aa2.29□□□□□ -2.04
CDKL5-208ENST00000624953 PRSS46E5RG02 174 aa2.29□□□□□ -2.04
CDKL5-208ENST00000624953 E9PBE3 544 aa2.29□□□□□ -2.04
CDKL5-208ENST00000624953 CASQ2O14958 399 aaPredicted RBP2.29□□□□□ -2.04
CDKL5-208ENST00000624953 TNFSF12O43508 249 aa2.29□□□□□ -2.04
CDKL5-208ENST00000624953 TYROBPO43914 113 aa2.29□□□□□ -2.04
CDKL5-208ENST00000624953 GLCEO94923 617 aa2.29□□□□□ -2.04
CDKL5-208ENST00000624953 GYPAP02724 150 aa2.29□□□□□ -2.04
CDKL5-208ENST00000624953 VIMP08670 466 aaKnown RBP2.29□□□□□ -2.04
CDKL5-208ENST00000624953 CLUP10909 449 aa2.29□□□□□ -2.04
CDKL5-208ENST00000624953 UQCRBP14927 111 aa2.29□□□□□ -2.04
CDKL5-208ENST00000624953 AREGP15514 252 aa2.29□□□□□ -2.04
CDKL5-208ENST00000624953 BGNP21810 368 aa2.29□□□□□ -2.04
CDKL5-208ENST00000624953 GTF2E2P29084 291 aaKnown RBP2.29□□□□□ -2.04
CDKL5-208ENST00000624953 GPR183P32249 361 aa2.29□□□□□ -2.04
CDKL5-208ENST00000624953 OR3A3P47888 321 aa2.29□□□□□ -2.04
CDKL5-208ENST00000624953 HTR5AP47898 357 aa2.29□□□□□ -2.04
CDKL5-208ENST00000624953 GDI2P50395 445 aaKnown RBP2.29□□□□□ -2.04
CDKL5-208ENST00000624953 RAB13P51153 203 aa2.29□□□□□ -2.04
CDKL5-208ENST00000624953 DSTNP60981 165 aa2.29□□□□□ -2.04
CDKL5-208ENST00000624953 ERVK-16P61578 105 aa2.29□□□□□ -2.04
CDKL5-208ENST00000624953 COPZ1P61923 177 aa2.29□□□□□ -2.04
CDKL5-208ENST00000624953 BLCAPP62952 87 aa2.29□□□□□ -2.04
CDKL5-208ENST00000624953 HPCAP84074 193 aa2.29□□□□□ -2.04
CDKL5-208ENST00000624953 HSF2Q03933 536 aa2.29□□□□□ -2.04
CDKL5-208ENST00000624953 RPL18Q07020 188 aaKnown RBP2.29□□□□□ -2.04
CDKL5-208ENST00000624953 GK2Q14410 553 aaPredicted RBP2.29□□□□□ -2.04
CDKL5-208ENST00000624953 OR1Q1Q15612 314 aa2.29□□□□□ -2.04
CDKL5-208ENST00000624953 MOGQ16653 247 aa2.29□□□□□ -2.04
CDKL5-208ENST00000624953 CCDC153Q494R4 210 aa2.29□□□□□ -2.04
CDKL5-208ENST00000624953 TTMPQ5BVD1 217 aa2.29□□□□□ -2.04
CDKL5-208ENST00000624953 CFAP157Q5JU67 520 aa2.29□□□□□ -2.04
CDKL5-208ENST00000624953 METTL11BQ5VVY1 283 aa2.29□□□□□ -2.04
CDKL5-208ENST00000624953 ZFAND6Q6FIF0 208 aa2.29□□□□□ -2.04
CDKL5-208ENST00000624953 ULK3Q6PHR2 472 aa2.29□□□□□ -2.04
CDKL5-208ENST00000624953 C5orf46Q6UWT4 87 aa2.29□□□□□ -2.04
CDKL5-208ENST00000624953 FBXW12Q6X9E4 464 aa2.29□□□□□ -2.04
CDKL5-208ENST00000624953 ZNF826PQ6ZT77 177 aa2.29□□□□□ -2.04
CDKL5-208ENST00000624953 NET1Q7Z628 596 aaPredicted RBP2.29□□□□□ -2.04
CDKL5-208ENST00000624953 NAA40Q86UY6 237 aa2.29□□□□□ -2.04
CDKL5-208ENST00000624953 RBM45Q8IUH3 476 aaKnown RBP2.29□□□□□ -2.04
CDKL5-208ENST00000624953 SBSPONQ8IVN8 264 aa2.29□□□□□ -2.04
CDKL5-208ENST00000624953 MSRB3Q8IXL7 192 aa2.29□□□□□ -2.04
CDKL5-208ENST00000624953 C11orf53Q8IXP5 236 aa2.29□□□□□ -2.04
CDKL5-208ENST00000624953 FAM216BQ8N7L0 139 aa2.29□□□□□ -2.04
CDKL5-208ENST00000624953 ZNF781Q8N8C0 355 aa2.29□□□□□ -2.04
CDKL5-208ENST00000624953 LRRC75AQ8NAA5 344 aa2.29□□□□□ -2.04
CDKL5-208ENST00000624953 BHLHE23Q8NDY6 225 aa2.29□□□□□ -2.04
CDKL5-208ENST00000624953 OR8G5Q8NG78 346 aa2.29□□□□□ -2.04
CDKL5-208ENST00000624953 GPR32P1Q8NGA4 272 aa2.29□□□□□ -2.04
CDKL5-208ENST00000624953 OR4F17Q8NGA8 305 aa2.29□□□□□ -2.04
CDKL5-208ENST00000624953 OR4S1Q8NGB4 309 aa2.29□□□□□ -2.04
CDKL5-208ENST00000624953 PFN4Q8NHR9 129 aa2.29□□□□□ -2.04
CDKL5-208ENST00000624953 SLC35B4Q969S0 331 aa2.29□□□□□ -2.04
CDKL5-208ENST00000624953 PLEKHA8Q96JA3 519 aa2.29□□□□□ -2.04
CDKL5-208ENST00000624953 OR4F4Q96R69 305 aa2.29□□□□□ -2.04
CDKL5-208ENST00000624953 OR5M11Q96RB7 305 aa2.29□□□□□ -2.04
CDKL5-208ENST00000624953 PANX1Q96RD7 426 aa2.29□□□□□ -2.04
CDKL5-208ENST00000624953 FMO2Q99518 471 aa2.29□□□□□ -2.04
CDKL5-208ENST00000624953 SORT1Q99523 831 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms