RNA–Protein interactions for RNA: ENST00000624931.1

PCF11-207, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

Gene PCF11, Length 1,720 nt, Biotype TEC, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-207ENST00000624931 PLEKHJ1Q9NW61 149 aa15.23■□□□□ 0.03
PCF11-207ENST00000624931 MGAQ8IWI9 3026 aa15.23■□□□□ 0.03
PCF11-207ENST00000624931 ZNF716A6NP11 495 aa15.23■□□□□ 0.03
PCF11-207ENST00000624931 C1QTNF9BB2RNN3 333 aa15.23■□□□□ 0.03
PCF11-207ENST00000624931 C9JQL5 133 aa15.23■□□□□ 0.03
PCF11-207ENST00000624931 H7C1Q1 480 aa15.23■□□□□ 0.03
PCF11-207ENST00000624931 AGPAT2O15120 278 aa15.23■□□□□ 0.03
PCF11-207ENST00000624931 DNPH1O43598 174 aa15.23■□□□□ 0.03
PCF11-207ENST00000624931 FABP1P07148 127 aa15.23■□□□□ 0.03
PCF11-207ENST00000624931 C1QTNF9P0C862 333 aa15.23■□□□□ 0.03
PCF11-207ENST00000624931 ZNF44P15621 663 aa15.23■□□□□ 0.03
PCF11-207ENST00000624931 ZNF14P17017 642 aaPredicted RBP15.23■□□□□ 0.03
PCF11-207ENST00000624931 S100PP25815 95 aa15.23■□□□□ 0.03
PCF11-207ENST00000624931 PPT1P50897 306 aa15.23■□□□□ 0.03
PCF11-207ENST00000624931 HGFACQ04756 655 aa15.23■□□□□ 0.03
PCF11-207ENST00000624931 PHYHD1Q5SRE7 291 aa15.23■□□□□ 0.03
PCF11-207ENST00000624931 SYT3Q9BQG1 590 aa15.23■□□□□ 0.03
PCF11-207ENST00000624931 NAA60Q9H7X0 242 aa15.23■□□□□ 0.03
PCF11-207ENST00000624931 ZNF701Q9NV72 531 aaPredicted RBP15.23■□□□□ 0.03
PCF11-207ENST00000624931 ANXA10Q9UJ72 324 aa15.23■□□□□ 0.03
PCF11-207ENST00000624931 LSM5Q9Y4Y9 91 aaKnown RBP15.23■□□□□ 0.03
PCF11-207ENST00000624931 DMXL2Q8TDJ6 3036 aa15.22■□□□□ 0.03
PCF11-207ENST00000624931 GLAP06280 429 aa15.22■□□□□ 0.03
PCF11-207ENST00000624931 SLC2A1P11166 492 aa15.22■□□□□ 0.03
PCF11-207ENST00000624931 FCGR2AP12318 317 aa15.22■□□□□ 0.03
PCF11-207ENST00000624931 MSR1P21757 451 aa15.22■□□□□ 0.03
PCF11-207ENST00000624931 NTF4P34130 210 aa15.22■□□□□ 0.03
PCF11-207ENST00000624931 CAMLGP49069 296 aa15.22■□□□□ 0.03
PCF11-207ENST00000624931 MIDNQ504T8 468 aa15.22■□□□□ 0.03
PCF11-207ENST00000624931 AWAT1Q58HT5 328 aa15.22■□□□□ 0.03
PCF11-207ENST00000624931 RPUSD3Q6P087 351 aaKnown RBP15.22■□□□□ 0.03
PCF11-207ENST00000624931 FOXL2NBQ6ZUU3 175 aa15.22■□□□□ 0.03
PCF11-207ENST00000624931 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.22■□□□□ 0.03
PCF11-207ENST00000624931 C1QL4Q86Z23 238 aa15.22■□□□□ 0.03
PCF11-207ENST00000624931 FOXRED2Q8IWF2 684 aa15.22■□□□□ 0.03
PCF11-207ENST00000624931 OR8G5Q8NG78 346 aa15.22■□□□□ 0.03
PCF11-207ENST00000624931 NANPQ8TBE9 248 aa15.22■□□□□ 0.03
PCF11-207ENST00000624931 SPSB1Q96BD6 273 aa15.22■□□□□ 0.03
PCF11-207ENST00000624931 ABHD17AQ96GS6 310 aa15.22■□□□□ 0.03
PCF11-207ENST00000624931 METTL9Q9H1A3 318 aa15.22■□□□□ 0.03
PCF11-207ENST00000624931 OR51M1Q9H341 326 aa15.22■□□□□ 0.03
PCF11-207ENST00000624931 PLA2G2EQ9NZK7 142 aa15.22■□□□□ 0.03
PCF11-207ENST00000624931 TP53TG5Q9Y2B4 290 aa15.22■□□□□ 0.03
PCF11-207ENST00000624931 CACNA1GO43497 2377 aa15.21■□□□□ 0.03
PCF11-207ENST00000624931 PTPRQQ9UMZ3 2332 aa15.21■□□□□ 0.03
PCF11-207ENST00000624931 LAMA5O15230 3695 aa15.21■□□□□ 0.03
PCF11-207ENST00000624931 MKRN2OSH3BPM6 223 aa15.21■□□□□ 0.03
PCF11-207ENST00000624931 IFNA17P01571 189 aa15.21■□□□□ 0.03
PCF11-207ENST00000624931 OR5H8P0DN80 308 aa15.21■□□□□ 0.03
PCF11-207ENST00000624931 RAB5AP20339 215 aa15.21■□□□□ 0.03
PCF11-207ENST00000624931 SERPINA2P20848 420 aa15.21■□□□□ 0.03
PCF11-207ENST00000624931 DUSP1P28562 367 aa15.21■□□□□ 0.03
PCF11-207ENST00000624931 CDAP32320 146 aa15.21■□□□□ 0.03
PCF11-207ENST00000624931 UCP3P55916 312 aa15.21■□□□□ 0.03
PCF11-207ENST00000624931 C10orf128Q5T292 105 aa15.21■□□□□ 0.03
PCF11-207ENST00000624931 Q6ZS92 163 aa15.21■□□□□ 0.03
PCF11-207ENST00000624931 LGI3Q8N145 548 aa15.21■□□□□ 0.03
PCF11-207ENST00000624931 CPNE4Q96A23 557 aaPredicted RBP15.21■□□□□ 0.03
PCF11-207ENST00000624931 INTS12Q96CB8 462 aaKnown RBP15.21■□□□□ 0.03
PCF11-207ENST00000624931 FAM122AQ96E09 287 aa15.21■□□□□ 0.03
PCF11-207ENST00000624931 POM121Q96HA1 1249 aa15.21■□□□□ 0.03
PCF11-207ENST00000624931 Q96M66 194 aa15.21■□□□□ 0.03
PCF11-207ENST00000624931 SOX7Q9BT81 388 aa15.21■□□□□ 0.03
PCF11-207ENST00000624931 SLC35B3Q9H1N7 401 aa15.21■□□□□ 0.03
PCF11-207ENST00000624931 KCNJ16Q9NPI9 418 aa15.21■□□□□ 0.03
PCF11-207ENST00000624931 C19orf12Q9NSK7 152 aa15.21■□□□□ 0.03
PCF11-207ENST00000624931 LHX6Q9UPM6 363 aa15.21■□□□□ 0.03
PCF11-207ENST00000624931 VAMP5O95183 116 aa15.2■□□□□ 0.02
PCF11-207ENST00000624931 ZNF728P0DKX0 622 aa15.2■□□□□ 0.02
PCF11-207ENST00000624931 HIST1H3AP68431 136 aa15.2■□□□□ 0.02
PCF11-207ENST00000624931 TMEM187Q14656 261 aa15.2■□□□□ 0.02
PCF11-207ENST00000624931 ABCA11PQ4W5N1 156 aa15.2■□□□□ 0.02
PCF11-207ENST00000624931 HIST2H3PS2Q5TEC6 136 aa15.2■□□□□ 0.02
PCF11-207ENST00000624931 FAM219AQ8IW50 185 aa15.2■□□□□ 0.02
PCF11-207ENST00000624931 TMEM123Q8N131 208 aa15.2■□□□□ 0.02
PCF11-207ENST00000624931 MRPL24Q96A35 216 aaKnown RBP15.2■□□□□ 0.02
PCF11-207ENST00000624931 WDYHV1Q96HA8 205 aa15.2■□□□□ 0.02
PCF11-207ENST00000624931 SCRT1Q9BWW7 348 aa15.2■□□□□ 0.02
PCF11-207ENST00000624931 EIF5A2Q9GZV4 153 aaKnown RBP15.2■□□□□ 0.02
PCF11-207ENST00000624931 NELFAQ9H3P2 528 aa15.2■□□□□ 0.02
PCF11-207ENST00000624931 BTBD17A6NE02 478 aa15.2■□□□□ 0.02
PCF11-207ENST00000624931 M0R036 132 aa15.2■□□□□ 0.02
PCF11-207ENST00000624931 CYTIPO60759 359 aa15.2■□□□□ 0.02
PCF11-207ENST00000624931 IGHV2-5P01817 119 aa15.2■□□□□ 0.02
PCF11-207ENST00000624931 SNRNP70P08621 437 aaKnown RBP15.2■□□□□ 0.02
PCF11-207ENST00000624931 LMO1P25800 156 aa15.2■□□□□ 0.02
PCF11-207ENST00000624931 TMPRSS3P57727 454 aa15.2■□□□□ 0.02
PCF11-207ENST00000624931 SRPXP78539 464 aa15.2■□□□□ 0.02
PCF11-207ENST00000624931 CRIP3Q6Q6R5 217 aa15.2■□□□□ 0.02
PCF11-207ENST00000624931 C1QL2Q7Z5L3 287 aa15.2■□□□□ 0.02
PCF11-207ENST00000624931 CCDC71LQ8N9Z2 235 aa15.2■□□□□ 0.02
PCF11-207ENST00000624931 LYZL4Q96KX0 146 aa15.2■□□□□ 0.02
PCF11-207ENST00000624931 SPACA1Q9HBV2 294 aa15.2■□□□□ 0.02
PCF11-207ENST00000624931 ST8SIA3O43173 380 aa15.19■□□□□ 0.02
PCF11-207ENST00000624931 IGHG3P01860 377 aa15.19■□□□□ 0.02
PCF11-207ENST00000624931 MBPP02686 304 aaPredicted RBP15.19■□□□□ 0.02
PCF11-207ENST00000624931 CHATP28329 748 aa15.19■□□□□ 0.02
PCF11-207ENST00000624931 OTX1P32242 354 aaPredicted RBP15.19■□□□□ 0.02
PCF11-207ENST00000624931 CSNK1A1P48729 337 aa15.19■□□□□ 0.02
PCF11-207ENST00000624931 PIGPP57054 158 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms