RNA–Protein interactions for RNA: ENST00000622645.4

TP53-227, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,653 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-227ENST00000622645 PLP2Q04941 152 aa10.26□□□□□ -0.77
TP53-227ENST00000622645 RNFT1Q5M7Z0 435 aa10.26□□□□□ -0.77
TP53-227ENST00000622645 RSRP1Q9BUV0 290 aa10.26□□□□□ -0.77
TP53-227ENST00000622645 MMP26Q9NRE1 261 aa10.26□□□□□ -0.77
TP53-227ENST00000622645 KLF13Q9Y2Y9 288 aaPredicted RBP10.26□□□□□ -0.77
TP53-227ENST00000622645 FAM96BQ9Y3D0 163 aa10.26□□□□□ -0.77
TP53-227ENST00000622645 H7C1Q1 480 aa10.26□□□□□ -0.77
TP53-227ENST00000622645 SS18L1O75177 396 aaPredicted RBP10.26□□□□□ -0.77
TP53-227ENST00000622645 MED6O75586 246 aa10.26□□□□□ -0.77
TP53-227ENST00000622645 IL18BPO95998 194 aa10.26□□□□□ -0.77
TP53-227ENST00000622645 GNRHRP30968 328 aa10.26□□□□□ -0.77
TP53-227ENST00000622645 ARR3P36575 388 aa10.26□□□□□ -0.77
TP53-227ENST00000622645 WNT5AP41221 380 aa10.26□□□□□ -0.77
TP53-227ENST00000622645 ID4P47928 161 aa10.26□□□□□ -0.77
TP53-227ENST00000622645 UCP3P55916 312 aa10.26□□□□□ -0.77
TP53-227ENST00000622645 ZNF169Q14929 603 aaPredicted RBP10.26□□□□□ -0.77
TP53-227ENST00000622645 RNPS1Q15287 305 aaKnown RBP10.26□□□□□ -0.77
TP53-227ENST00000622645 TMEM268Q5VZI3 342 aa10.26□□□□□ -0.77
TP53-227ENST00000622645 HAGHLQ6PII5 290 aaPredicted RBP10.26□□□□□ -0.77
TP53-227ENST00000622645 PUSL1Q8N0Z8 303 aaKnown RBP10.26□□□□□ -0.77
TP53-227ENST00000622645 LGI3Q8N145 548 aa10.26□□□□□ -0.77
TP53-227ENST00000622645 LRTM2Q8N967 370 aa10.26□□□□□ -0.77
TP53-227ENST00000622645 NEK7Q8TDX7 302 aa10.26□□□□□ -0.77
TP53-227ENST00000622645 SMIM8Q96KF7 97 aa10.26□□□□□ -0.77
TP53-227ENST00000622645 PARP12Q9H0J9 701 aaKnown RBP10.26□□□□□ -0.77
TP53-227ENST00000622645 TREM1Q9NP99 234 aa10.26□□□□□ -0.77
TP53-227ENST00000622645 ARGFXA6NJG6 315 aa10.25□□□□□ -0.77
TP53-227ENST00000622645 TRAPPC2LH3BP13 241 aa10.25□□□□□ -0.77
TP53-227ENST00000622645 F12P00748 615 aaPredicted RBP10.25□□□□□ -0.77
TP53-227ENST00000622645 PMELP40967 661 aa10.25□□□□□ -0.77
TP53-227ENST00000622645 EIF5AP63241 154 aaKnown RBP10.25□□□□□ -0.77
TP53-227ENST00000622645 PJVKQ0ZLH3 352 aa10.25□□□□□ -0.77
TP53-227ENST00000622645 SLC35G3Q8N808 338 aa10.25□□□□□ -0.77
TP53-227ENST00000622645 CLRN3Q8NCR9 226 aa10.25□□□□□ -0.77
TP53-227ENST00000622645 SECTM1Q8WVN6 248 aa10.25□□□□□ -0.77
TP53-227ENST00000622645 LOXL4Q96JB6 756 aa10.25□□□□□ -0.77
TP53-227ENST00000622645 FER1L6-AS2Q96M78 137 aa10.25□□□□□ -0.77
TP53-227ENST00000622645 TLNRD1Q9H1K6 362 aa10.25□□□□□ -0.77
TP53-227ENST00000622645 RNF122Q9H9V4 155 aa10.25□□□□□ -0.77
TP53-227ENST00000622645 Q9N2K0 584 aa10.25□□□□□ -0.77
TP53-227ENST00000622645 KMT2EQ8IZD2 1858 aa10.25□□□□□ -0.77
TP53-227ENST00000622645 PRRC2CQ9Y520 2896 aaKnown RBP10.25□□□□□ -0.77
TP53-227ENST00000622645 PCNX2A6NKB5 2137 aa10.25□□□□□ -0.77
TP53-227ENST00000622645 E5RGE8 158 aa10.25□□□□□ -0.77
TP53-227ENST00000622645 F8W036 122 aa10.25□□□□□ -0.77
TP53-227ENST00000622645 AGPAT2O15120 278 aa10.25□□□□□ -0.77
TP53-227ENST00000622645 MPPED1O15442 326 aa10.25□□□□□ -0.77
TP53-227ENST00000622645 NAPSAO96009 420 aa10.25□□□□□ -0.77
TP53-227ENST00000622645 IL32P24001 234 aa10.25□□□□□ -0.77
TP53-227ENST00000622645 BLOC1S1P78537 153 aa10.25□□□□□ -0.77
TP53-227ENST00000622645 HERPUD1Q15011 391 aa10.25□□□□□ -0.77
TP53-227ENST00000622645 SPIN3Q5JUX0 258 aa10.25□□□□□ -0.77
TP53-227ENST00000622645 SPATA46Q5T0L3 261 aa10.25□□□□□ -0.77
TP53-227ENST00000622645 EIF5AL1Q6IS14 154 aaKnown RBP10.25□□□□□ -0.77
TP53-227ENST00000622645 FBXW12Q6X9E4 464 aa10.25□□□□□ -0.77
TP53-227ENST00000622645 TMPRSS7Q7RTY8 843 aa10.25□□□□□ -0.77
TP53-227ENST00000622645 MKXQ8IYA7 352 aa10.25□□□□□ -0.77
TP53-227ENST00000622645 ZFP62Q8NB50 900 aaPredicted RBP10.25□□□□□ -0.77
TP53-227ENST00000622645 HIST1H2AAQ96QV6 131 aa10.25□□□□□ -0.77
TP53-227ENST00000622645 RHOFQ9HBH0 211 aa10.25□□□□□ -0.77
TP53-227ENST00000622645 NSG2Q9Y328 171 aa10.25□□□□□ -0.77
TP53-227ENST00000622645 C3orf85A0A1B0GTC6 90 aa10.24□□□□□ -0.77
TP53-227ENST00000622645 FAM90A10PA6NDY2 464 aa10.24□□□□□ -0.77
TP53-227ENST00000622645 FAM90A18PA6NE21 464 aa10.24□□□□□ -0.77
TP53-227ENST00000622645 FAM90A16PA6NEW6 464 aa10.24□□□□□ -0.77
TP53-227ENST00000622645 FAM90A20PA6NIJ5 464 aa10.24□□□□□ -0.77
TP53-227ENST00000622645 FAM90A8PA6NJQ4 464 aa10.24□□□□□ -0.77
TP53-227ENST00000622645 FAM90A7PA6NKC0 464 aa10.24□□□□□ -0.77
TP53-227ENST00000622645 FAM90A22PA8MWA6 464 aa10.24□□□□□ -0.77
TP53-227ENST00000622645 FAM90A12PA8MX19 464 aa10.24□□□□□ -0.77
TP53-227ENST00000622645 FAM90A5PA8MXJ8 464 aa10.24□□□□□ -0.77
TP53-227ENST00000622645 FAM90A23PA8MXZ1 464 aa10.24□□□□□ -0.77
TP53-227ENST00000622645 JTBO76095 146 aa10.24□□□□□ -0.77
TP53-227ENST00000622645 FAM90A15PP0C7V4 464 aa10.24□□□□□ -0.77
TP53-227ENST00000622645 FAM90A13PP0C7W8 464 aa10.24□□□□□ -0.77
TP53-227ENST00000622645 FAM90A14PP0C7W9 464 aa10.24□□□□□ -0.77
TP53-227ENST00000622645 FAM90A24PP0C7X0 464 aa10.24□□□□□ -0.77
TP53-227ENST00000622645 PRKACAP17612 351 aa10.24□□□□□ -0.77
TP53-227ENST00000622645 CLN3Q13286 438 aa10.24□□□□□ -0.77
TP53-227ENST00000622645 TMEM88Q6PEY1 159 aa10.24□□□□□ -0.77
TP53-227ENST00000622645 SAXO1Q8IYX7 474 aa10.24□□□□□ -0.77
TP53-227ENST00000622645 CCDC71LQ8N9Z2 235 aa10.24□□□□□ -0.77
TP53-227ENST00000622645 OR5A2Q8NGI9 324 aa10.24□□□□□ -0.77
TP53-227ENST00000622645 SAT2Q96F10 170 aaPredicted RBP10.24□□□□□ -0.77
TP53-227ENST00000622645 PLEKHA2Q9HB19 425 aa10.24□□□□□ -0.77
TP53-227ENST00000622645 PLSCR2Q9NRY7 297 aa10.24□□□□□ -0.77
TP53-227ENST00000622645 SPRR3Q9UBC9 169 aa10.24□□□□□ -0.77
TP53-227ENST00000622645 ZDHHC8Q9ULC8 765 aa10.24□□□□□ -0.77
TP53-227ENST00000622645 IGKV1D-13A0A0B4J2D9 117 aa10.24□□□□□ -0.77
TP53-227ENST00000622645 HS3ST1O14792 307 aa10.24□□□□□ -0.77
TP53-227ENST00000622645 TK1P04183 234 aa10.24□□□□□ -0.77
TP53-227ENST00000622645 IGKV1-13P0DP09 117 aa10.24□□□□□ -0.77
TP53-227ENST00000622645 CD46P15529 392 aa10.24□□□□□ -0.77
TP53-227ENST00000622645 APLNRP35414 380 aa10.24□□□□□ -0.77
TP53-227ENST00000622645 OR2T2Q6IF00 324 aa10.24□□□□□ -0.77
TP53-227ENST00000622645 C20orf204Q6ZNR8 217 aa10.24□□□□□ -0.77
TP53-227ENST00000622645 C17orf78Q8N4C9 275 aa10.24□□□□□ -0.77
TP53-227ENST00000622645 OR5P3Q8WZ94 311 aa10.24□□□□□ -0.77
TP53-227ENST00000622645 WDYHV1Q96HA8 205 aa10.24□□□□□ -0.77
TP53-227ENST00000622645 UQCC1Q9NVA1 299 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms