RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 UXS1Q8NBZ7 420 aa18.15■□□□□ 0.5
SPAST-204ENST00000621856 FN3KRPQ9HA64 309 aa18.15■□□□□ 0.5
SPAST-204ENST00000621856 HES4Q9HCC6 221 aa18.15■□□□□ 0.5
SPAST-204ENST00000621856 OR14J1Q9UGF5 321 aa18.15■□□□□ 0.5
SPAST-204ENST00000621856 GLS2Q9UI32 602 aa18.15■□□□□ 0.5
SPAST-204ENST00000621856 MEIKINA0A087WXM9 373 aa18.14■□□□□ 0.49
SPAST-204ENST00000621856 WNT9BO14905 357 aa18.14■□□□□ 0.49
SPAST-204ENST00000621856 NAPSAO96009 420 aa18.14■□□□□ 0.49
SPAST-204ENST00000621856 GLRA1P23415 457 aa18.14■□□□□ 0.49
SPAST-204ENST00000621856 ZNF81P51508 661 aa18.14■□□□□ 0.49
SPAST-204ENST00000621856 ZNF146Q15072 292 aa18.14■□□□□ 0.49
SPAST-204ENST00000621856 Q6ZPA2 131 aa18.14■□□□□ 0.49
SPAST-204ENST00000621856 LRRC46Q96FV0 321 aa18.14■□□□□ 0.49
SPAST-204ENST00000621856 ZNF2Q9BSG1 426 aaPredicted RBP18.14■□□□□ 0.49
SPAST-204ENST00000621856 WDR13Q9H1Z4 485 aa18.14■□□□□ 0.49
SPAST-204ENST00000621856 Q9N2K0 584 aa18.14■□□□□ 0.49
SPAST-204ENST00000621856 PGAM2P15259 253 aa18.13■□□□□ 0.49
SPAST-204ENST00000621856 AKR1C4P17516 323 aa18.13■□□□□ 0.49
SPAST-204ENST00000621856 TAS2R31P59538 309 aa18.13■□□□□ 0.49
SPAST-204ENST00000621856 UBE2MP61081 183 aaKnown RBP18.13■□□□□ 0.49
SPAST-204ENST00000621856 AADACL3Q5VUY0 350 aa18.13■□□□□ 0.49
SPAST-204ENST00000621856 ADAM5Q6NVV9 412 aa18.13■□□□□ 0.49
SPAST-204ENST00000621856 ADAD2Q8NCV1 583 aaKnown RBP18.13■□□□□ 0.49
SPAST-204ENST00000621856 LILRB4Q8NHJ6 448 aa18.13■□□□□ 0.49
SPAST-204ENST00000621856 LRRC29Q8WV35 223 aa18.13■□□□□ 0.49
SPAST-204ENST00000621856 MEGF10Q96KG7 1140 aa18.13■□□□□ 0.49
SPAST-204ENST00000621856 OR2V2Q96R30 315 aa18.13■□□□□ 0.49
SPAST-204ENST00000621856 RIMS4Q9H426 269 aaPredicted RBP18.13■□□□□ 0.49
SPAST-204ENST00000621856 ESRP2Q9H6T0 727 aaKnown RBP18.13■□□□□ 0.49
SPAST-204ENST00000621856 GPR132Q9UNW8 380 aa18.13■□□□□ 0.49
SPAST-204ENST00000621856 OR5H14A6NHG9 310 aa18.12■□□□□ 0.49
SPAST-204ENST00000621856 SMLR1H3BR10 107 aa18.12■□□□□ 0.49
SPAST-204ENST00000621856 SLC33A1O00400 549 aaPredicted RBP18.12■□□□□ 0.49
SPAST-204ENST00000621856 HAND1O96004 215 aa18.12■□□□□ 0.49
SPAST-204ENST00000621856 GSTT2P0CG29 244 aa18.12■□□□□ 0.49
SPAST-204ENST00000621856 DHRS2Q13268 280 aa18.12■□□□□ 0.49
SPAST-204ENST00000621856 SNTB1Q13884 538 aaKnown RBP18.12■□□□□ 0.49
SPAST-204ENST00000621856 ACP7Q6ZNF0 438 aa18.12■□□□□ 0.49
SPAST-204ENST00000621856 NOXA1Q86UR1 476 aa18.12■□□□□ 0.49
SPAST-204ENST00000621856 SPICQ8N5J4 248 aa18.12■□□□□ 0.49
SPAST-204ENST00000621856 CA5BP1Q8WTZ4 195 aa18.12■□□□□ 0.49
SPAST-204ENST00000621856 ZNF436Q9C0F3 470 aaPredicted RBP18.12■□□□□ 0.49
SPAST-204ENST00000621856 NDRG3Q9UGV2 375 aa18.12■□□□□ 0.49
SPAST-204ENST00000621856 CHD3Q12873 2000 aaKnown RBP18.12■□□□□ 0.49
SPAST-204ENST00000621856 CEACAM18A8MTB9 384 aa18.12■□□□□ 0.49
SPAST-204ENST00000621856 HLA-AP01891 365 aaKnown RBP18.12■□□□□ 0.49
SPAST-204ENST00000621856 MDH2P40926 338 aaKnown RBP18.12■□□□□ 0.49
SPAST-204ENST00000621856 GLP1RP43220 463 aa18.12■□□□□ 0.49
SPAST-204ENST00000621856 BAMBIQ13145 260 aa18.12■□□□□ 0.49
SPAST-204ENST00000621856 SRSF7Q16629 238 aaKnown RBP eCLIP18.12■□□□□ 0.49
SPAST-204ENST00000621856 Q6ZS49 121 aa18.12■□□□□ 0.49
SPAST-204ENST00000621856 LYG2Q86SG7 212 aa18.12■□□□□ 0.49
SPAST-204ENST00000621856 C12orf45Q8N5I9 185 aaPredicted RBP18.12■□□□□ 0.49
SPAST-204ENST00000621856 MRPL30Q8TCC3 161 aaKnown RBP18.12■□□□□ 0.49
SPAST-204ENST00000621856 PTBP3O95758 552 aaKnown RBP18.11■□□□□ 0.49
SPAST-204ENST00000621856 C1QBP02746 253 aa18.11■□□□□ 0.49
SPAST-204ENST00000621856 ECI1P42126 302 aa18.11■□□□□ 0.49
SPAST-204ENST00000621856 CEBPDP49716 269 aaPredicted RBP18.11■□□□□ 0.49
SPAST-204ENST00000621856 PPP1R1AQ13522 171 aa18.11■□□□□ 0.49
SPAST-204ENST00000621856 SMIM21Q3B7S5 101 aa18.11■□□□□ 0.49
SPAST-204ENST00000621856 FAHD2BQ6P2I3 314 aaPredicted RBP18.11■□□□□ 0.49
SPAST-204ENST00000621856 PEG10Q86TG7 708 aaKnown RBP18.11■□□□□ 0.49
SPAST-204ENST00000621856 OR2AK2Q8NG84 335 aa18.11■□□□□ 0.49
SPAST-204ENST00000621856 ITLN1Q8WWA0 313 aa18.11■□□□□ 0.49
SPAST-204ENST00000621856 FAHD2AQ96GK7 314 aa18.11■□□□□ 0.49
SPAST-204ENST00000621856 ERRFI1Q9UJM3 462 aaPredicted RBP18.11■□□□□ 0.49
SPAST-204ENST00000621856 VSTM5A8MXK1 200 aa18.1■□□□□ 0.49
SPAST-204ENST00000621856 FABP7O15540 132 aa18.1■□□□□ 0.49
SPAST-204ENST00000621856 KNG1P01042 644 aa18.1■□□□□ 0.49
SPAST-204ENST00000621856 OR4A8P0C604 315 aa18.1■□□□□ 0.49
SPAST-204ENST00000621856 TNFSF4P23510 183 aa18.1■□□□□ 0.49
SPAST-204ENST00000621856 VAMP1P23763 118 aa18.1■□□□□ 0.49
SPAST-204ENST00000621856 ZBTB25P24278 435 aa18.1■□□□□ 0.49
SPAST-204ENST00000621856 HOXA4Q00056 320 aaPredicted RBP18.1■□□□□ 0.49
SPAST-204ENST00000621856 ADIPOQQ15848 244 aa18.1■□□□□ 0.49
SPAST-204ENST00000621856 NCMAPQ5T1S8 102 aa18.1■□□□□ 0.49
SPAST-204ENST00000621856 MOGAT3Q86VF5 341 aa18.1■□□□□ 0.49
SPAST-204ENST00000621856 OR10Z1Q8NGY1 313 aa18.1■□□□□ 0.49
SPAST-204ENST00000621856 PLPPR2Q96GM1 343 aa18.1■□□□□ 0.49
SPAST-204ENST00000621856 TMPRSS13Q9BYE2 586 aa18.1■□□□□ 0.49
SPAST-204ENST00000621856 CHIAQ9BZP6 476 aa18.1■□□□□ 0.49
SPAST-204ENST00000621856 C5orf66Q9H5L9 145 aa18.1■□□□□ 0.49
SPAST-204ENST00000621856 KIR2DS1A0A191URI9 304 aa18.09■□□□□ 0.49
SPAST-204ENST00000621856 GOSR2O14653 212 aa18.09■□□□□ 0.49
SPAST-204ENST00000621856 IGHV1-46P01743 117 aa18.09■□□□□ 0.49
SPAST-204ENST00000621856 PI3P19957 117 aa18.09■□□□□ 0.49
SPAST-204ENST00000621856 CD34P28906 385 aa18.09■□□□□ 0.49
SPAST-204ENST00000621856 KIR2DS4P43632 304 aa18.09■□□□□ 0.49
SPAST-204ENST00000621856 TNFAIP6P98066 277 aaPredicted RBP18.09■□□□□ 0.49
SPAST-204ENST00000621856 KIR2DS1Q14954 304 aa18.09■□□□□ 0.49
SPAST-204ENST00000621856 SURF2Q15527 256 aaPredicted RBP18.09■□□□□ 0.49
SPAST-204ENST00000621856 ZNF660Q6AZW8 331 aaPredicted RBP18.09■□□□□ 0.49
SPAST-204ENST00000621856 DHRS11Q6UWP2 260 aa18.09■□□□□ 0.49
SPAST-204ENST00000621856 BOLLQ8N9W6 283 aaKnown RBP18.09■□□□□ 0.49
SPAST-204ENST00000621856 LINC01560Q8TB33 94 aa18.09■□□□□ 0.49
SPAST-204ENST00000621856 TMEM165Q9HC07 324 aa18.09■□□□□ 0.49
SPAST-204ENST00000621856 KCNJ16Q9NPI9 418 aa18.09■□□□□ 0.49
SPAST-204ENST00000621856 ZDHHC8Q9ULC8 765 aa18.09■□□□□ 0.49
SPAST-204ENST00000621856 C14orf166Q9Y224 244 aaKnown RBP18.09■□□□□ 0.49
SPAST-204ENST00000621856 TRBV6-6A0A0A6YYG2 114 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms