RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 KISS1Q15726 138 aa6.09□□□□□ -1.43
NEDD9-216ENST00000620854 CYB5R2Q6BCY4 276 aa6.09□□□□□ -1.43
NEDD9-216ENST00000620854 OR5AS1Q8N127 324 aa6.09□□□□□ -1.43
NEDD9-216ENST00000620854 OR11L1Q8NGX0 322 aa6.09□□□□□ -1.43
NEDD9-216ENST00000620854 OR1L3Q8NH93 324 aa6.09□□□□□ -1.43
NEDD9-216ENST00000620854 CA5BP1Q8WTZ4 195 aa6.09□□□□□ -1.43
NEDD9-216ENST00000620854 RNF133Q8WVZ7 376 aa6.09□□□□□ -1.43
NEDD9-216ENST00000620854 ZNF799Q96GE5 643 aa6.09□□□□□ -1.43
NEDD9-216ENST00000620854 SLC35B3Q9H1N7 401 aa6.09□□□□□ -1.43
NEDD9-216ENST00000620854 GNG12Q9UBI6 72 aa6.09□□□□□ -1.43
NEDD9-216ENST00000620854 ZNF107Q9UII5 783 aaPredicted RBP6.09□□□□□ -1.43
NEDD9-216ENST00000620854 CCDC187A0A096LP49 1063 aa6.09□□□□□ -1.44
NEDD9-216ENST00000620854 TGIF2-C20orf24A0A0A6YYL0 155 aa6.09□□□□□ -1.44
NEDD9-216ENST00000620854 HSPB2A8KAH6 182 aa6.09□□□□□ -1.44
NEDD9-216ENST00000620854 FAM157AC9JC47 383 aa6.09□□□□□ -1.44
NEDD9-216ENST00000620854 SPRY1O43609 319 aaPredicted RBP6.09□□□□□ -1.44
NEDD9-216ENST00000620854 SRSF10O75494 262 aaKnown RBP6.09□□□□□ -1.44
NEDD9-216ENST00000620854 IGHV2-5P01817 119 aa6.09□□□□□ -1.44
NEDD9-216ENST00000620854 TRGC2P03986 189 aa6.09□□□□□ -1.44
NEDD9-216ENST00000620854 ISG15P05161 165 aa6.09□□□□□ -1.44
NEDD9-216ENST00000620854 SPINK2P20155 84 aa6.09□□□□□ -1.44
NEDD9-216ENST00000620854 TAS2R30P59541 319 aa6.09□□□□□ -1.44
NEDD9-216ENST00000620854 GAMTQ14353 236 aa6.09□□□□□ -1.44
NEDD9-216ENST00000620854 HSPB2Q16082 182 aa6.09□□□□□ -1.44
NEDD9-216ENST00000620854 TMEM268Q5VZI3 342 aa6.09□□□□□ -1.44
NEDD9-216ENST00000620854 RTL6Q6ICC9 239 aa6.09□□□□□ -1.44
NEDD9-216ENST00000620854 VASH2Q86V25 355 aa6.09□□□□□ -1.44
NEDD9-216ENST00000620854 GNRHR2Q96P88 292 aa6.09□□□□□ -1.44
NEDD9-216ENST00000620854 AP1S3Q96PC3 154 aa6.09□□□□□ -1.44
NEDD9-216ENST00000620854 SH3BGRL2Q9UJC5 107 aa6.09□□□□□ -1.44
NEDD9-216ENST00000620854 NOSIPQ9Y314 301 aaKnown RBP6.09□□□□□ -1.44
NEDD9-216ENST00000620854 LIPGQ9Y5X9 500 aa6.09□□□□□ -1.44
NEDD9-216ENST00000620854 A0A096LPE4 126 aa6.08□□□□□ -1.44
NEDD9-216ENST00000620854 IGKV1-9A0A0C4DH69 117 aa6.08□□□□□ -1.44
NEDD9-216ENST00000620854 A0A1W2PPZ6 126 aa6.08□□□□□ -1.44
NEDD9-216ENST00000620854 FAM24AA6NFZ4 105 aa6.08□□□□□ -1.44
NEDD9-216ENST00000620854 TAAR5O14804 337 aa6.08□□□□□ -1.44
NEDD9-216ENST00000620854 SSSCA1O60232 199 aa6.08□□□□□ -1.44
NEDD9-216ENST00000620854 TNFSF15O95150 251 aa6.08□□□□□ -1.44
NEDD9-216ENST00000620854 HLA-HP01893 362 aa6.08□□□□□ -1.44
NEDD9-216ENST00000620854 FOLR2P14207 255 aa6.08□□□□□ -1.44
NEDD9-216ENST00000620854 RPS2P15880 293 aaKnown RBP6.08□□□□□ -1.44
NEDD9-216ENST00000620854 PCBD1P61457 104 aa6.08□□□□□ -1.44
NEDD9-216ENST00000620854 TLE4Q04727 773 aa6.08□□□□□ -1.44
NEDD9-216ENST00000620854 BAXQ07812 192 aa6.08□□□□□ -1.44
NEDD9-216ENST00000620854 IL11RAQ14626 422 aa6.08□□□□□ -1.44
NEDD9-216ENST00000620854 SURF2Q15527 256 aaPredicted RBP6.08□□□□□ -1.44
NEDD9-216ENST00000620854 NSUN5P2Q63ZY6 315 aa6.08□□□□□ -1.44
NEDD9-216ENST00000620854 DOK3Q7L591 496 aa6.08□□□□□ -1.44
NEDD9-216ENST00000620854 LYPD6Q86Y78 171 aa6.08□□□□□ -1.44
NEDD9-216ENST00000620854 SLC38A9Q8NBW4 561 aa6.08□□□□□ -1.44
NEDD9-216ENST00000620854 RTN4IP1Q8WWV3 396 aaPredicted RBP6.08□□□□□ -1.44
NEDD9-216ENST00000620854 DNASE2BQ8WZ79 361 aa6.08□□□□□ -1.44
NEDD9-216ENST00000620854 EMG1Q92979 244 aaKnown RBP6.08□□□□□ -1.44
NEDD9-216ENST00000620854 ADIPOR1Q96A54 375 aa6.08□□□□□ -1.44
NEDD9-216ENST00000620854 PTX4Q96A99 478 aa6.08□□□□□ -1.44
NEDD9-216ENST00000620854 ZPBPQ9BS86 351 aa6.08□□□□□ -1.44
NEDD9-216ENST00000620854 NECAP2Q9NVZ3 263 aa6.08□□□□□ -1.44
NEDD9-216ENST00000620854 AK3Q9UIJ7 227 aa6.08□□□□□ -1.44
NEDD9-216ENST00000620854 BOKQ9UMX3 212 aaPredicted RBP6.08□□□□□ -1.44
NEDD9-216ENST00000620854 DMDP11532 3685 aa6.08□□□□□ -1.44
NEDD9-216ENST00000620854 ZNF816-ZNF321PA0A0X1KG74 233 aa6.08□□□□□ -1.44
NEDD9-216ENST00000620854 DEDDO75618 318 aa6.08□□□□□ -1.44
NEDD9-216ENST00000620854 OR2J2O76002 312 aa6.08□□□□□ -1.44
NEDD9-216ENST00000620854 GSTP1P09211 210 aaKnown RBP6.08□□□□□ -1.44
NEDD9-216ENST00000620854 CXCL1P09341 107 aa6.08□□□□□ -1.44
NEDD9-216ENST00000620854 RBP2P50120 134 aa6.08□□□□□ -1.44
NEDD9-216ENST00000620854 SSTP61278 116 aa6.08□□□□□ -1.44
NEDD9-216ENST00000620854 RUNX1Q01196 453 aa6.08□□□□□ -1.44
NEDD9-216ENST00000620854 FOXF1Q12946 379 aa6.08□□□□□ -1.44
NEDD9-216ENST00000620854 RAB31Q13636 194 aa6.08□□□□□ -1.44
NEDD9-216ENST00000620854 EDDM3AQ14507 147 aa6.08□□□□□ -1.44
NEDD9-216ENST00000620854 ZNF239Q16600 458 aaKnown RBP6.08□□□□□ -1.44
NEDD9-216ENST00000620854 SPANXN5Q5MJ07 72 aa6.08□□□□□ -1.44
NEDD9-216ENST00000620854 ASB10Q8WXI3 467 aa6.08□□□□□ -1.44
NEDD9-216ENST00000620854 POM121Q96HA1 1249 aa6.08□□□□□ -1.44
NEDD9-216ENST00000620854 TWSG1Q9GZX9 223 aa6.08□□□□□ -1.44
NEDD9-216ENST00000620854 C12orf49Q9H741 205 aa6.08□□□□□ -1.44
NEDD9-216ENST00000620854 CRLF2Q9HC73 371 aa6.08□□□□□ -1.44
NEDD9-216ENST00000620854 STARD10Q9Y365 291 aa6.08□□□□□ -1.44
NEDD9-216ENST00000620854 IFITM10A6NMD0 228 aa6.08□□□□□ -1.44
NEDD9-216ENST00000620854 ALG1L2C9J202 215 aa6.08□□□□□ -1.44
NEDD9-216ENST00000620854 MASP2O00187 686 aa6.08□□□□□ -1.44
NEDD9-216ENST00000620854 TOX3O15405 576 aaPredicted RBP6.08□□□□□ -1.44
NEDD9-216ENST00000620854 NXPH2O95156 264 aa6.08□□□□□ -1.44
NEDD9-216ENST00000620854 HBE1P02100 147 aa6.08□□□□□ -1.44
NEDD9-216ENST00000620854 GRPP07492 148 aa6.08□□□□□ -1.44
NEDD9-216ENST00000620854 CD46P15529 392 aa6.08□□□□□ -1.44
NEDD9-216ENST00000620854 TBPP20226 339 aa6.08□□□□□ -1.44
NEDD9-216ENST00000620854 GCH1P30793 250 aa6.08□□□□□ -1.44
NEDD9-216ENST00000620854 ARL3P36405 182 aa6.08□□□□□ -1.44
NEDD9-216ENST00000620854 EIF3IQ13347 325 aaKnown RBP6.08□□□□□ -1.44
NEDD9-216ENST00000620854 VAX1Q5SQQ9 334 aa6.08□□□□□ -1.44
NEDD9-216ENST00000620854 DMRTC2Q8IXT2 367 aaPredicted RBP6.08□□□□□ -1.44
NEDD9-216ENST00000620854 MAML2Q8IZL2 1156 aaPredicted RBP6.08□□□□□ -1.44
NEDD9-216ENST00000620854 ZNF721Q8TF20 911 aa6.08□□□□□ -1.44
NEDD9-216ENST00000620854 NANOS1Q8WY41 292 aaKnown RBP6.08□□□□□ -1.44
NEDD9-216ENST00000620854 RPUSD4Q96CM3 377 aaKnown RBP6.08□□□□□ -1.44
NEDD9-216ENST00000620854 EGLN1Q9GZT9 426 aa6.08□□□□□ -1.44
NEDD9-216ENST00000620854 LIME1Q9H400 295 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms