RNA–Protein interactions for RNA: ENST00000620204.3

TNFAIP3-210, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-210ENST00000620204 CLRN1P58418 232 aa8.55□□□□□ -1.04
TNFAIP3-210ENST00000620204 PLCXD2Q0VAA5 305 aa8.55□□□□□ -1.04
TNFAIP3-210ENST00000620204 TMEM267Q0VDI3 215 aaPredicted RBP8.55□□□□□ -1.04
TNFAIP3-210ENST00000620204 IL15RAQ13261 267 aa8.55□□□□□ -1.04
TNFAIP3-210ENST00000620204 ARL6IP1Q15041 203 aa8.55□□□□□ -1.04
TNFAIP3-210ENST00000620204 FAM189A2Q15884 450 aa8.55□□□□□ -1.04
TNFAIP3-210ENST00000620204 SGCBQ16585 318 aa8.55□□□□□ -1.04
TNFAIP3-210ENST00000620204 ZNF774Q6NX45 483 aa8.55□□□□□ -1.04
TNFAIP3-210ENST00000620204 FBXL14Q8N1E6 418 aa8.55□□□□□ -1.04
TNFAIP3-210ENST00000620204 ZNF709Q8N972 641 aa8.55□□□□□ -1.04
TNFAIP3-210ENST00000620204 CTHRC1Q96CG8 243 aa8.55□□□□□ -1.04
TNFAIP3-210ENST00000620204 VPS25Q9BRG1 176 aa8.55□□□□□ -1.04
TNFAIP3-210ENST00000620204 CLEC1BQ9P126 229 aa8.55□□□□□ -1.04
TNFAIP3-210ENST00000620204 MCTS1Q9ULC4 181 aaKnown RBP8.55□□□□□ -1.04
TNFAIP3-210ENST00000620204 HSPB6O14558 160 aa8.54□□□□□ -1.04
TNFAIP3-210ENST00000620204 HNRNPKP61978 463 aaKnown RBP eCLIP8.54□□□□□ -1.04
TNFAIP3-210ENST00000620204 ARF1P84077 181 aaKnown RBP8.54□□□□□ -1.04
TNFAIP3-210ENST00000620204 SPSB3Q6PJ21 355 aa8.54□□□□□ -1.04
TNFAIP3-210ENST00000620204 TMEM252Q8N6L7 170 aa8.54□□□□□ -1.04
TNFAIP3-210ENST00000620204 RLN3Q8WXF3 142 aa8.54□□□□□ -1.04
TNFAIP3-210ENST00000620204 TXN2Q99757 166 aa8.54□□□□□ -1.04
TNFAIP3-210ENST00000620204 RTN4RQ9BZR6 473 aa8.54□□□□□ -1.04
TNFAIP3-210ENST00000620204 CTSDP07339 412 aaPredicted RBP8.54□□□□□ -1.04
TNFAIP3-210ENST00000620204 MTCP1P56278 107 aa8.54□□□□□ -1.04
TNFAIP3-210ENST00000620204 GNB2P62879 340 aa8.54□□□□□ -1.04
TNFAIP3-210ENST00000620204 ENDOGQ14249 297 aaKnown RBP8.54□□□□□ -1.04
TNFAIP3-210ENST00000620204 SHISA6Q6ZSJ9 500 aa8.54□□□□□ -1.04
TNFAIP3-210ENST00000620204 ARHGEF39Q8N4T4 335 aa8.54□□□□□ -1.04
TNFAIP3-210ENST00000620204 PRSS50Q9UI38 385 aa8.54□□□□□ -1.04
TNFAIP3-210ENST00000620204 LTBP2Q14767 1821 aa8.54□□□□□ -1.04
TNFAIP3-210ENST00000620204 ASXL3Q9C0F0 2248 aa8.54□□□□□ -1.04
TNFAIP3-210ENST00000620204 HEATR1Q9H583 2144 aaKnown RBP8.54□□□□□ -1.04
TNFAIP3-210ENST00000620204 GRIFINA4D1Z8 144 aa8.54□□□□□ -1.04
TNFAIP3-210ENST00000620204 TGFBR3LH3BV60 316 aa8.54□□□□□ -1.04
TNFAIP3-210ENST00000620204 ADAM20O43506 726 aa8.54□□□□□ -1.04
TNFAIP3-210ENST00000620204 SUCLG1P53597 346 aaKnown RBP8.54□□□□□ -1.04
TNFAIP3-210ENST00000620204 IL13RA2Q14627 380 aa8.54□□□□□ -1.04
TNFAIP3-210ENST00000620204 BSXQ3C1V8 233 aa8.54□□□□□ -1.04
TNFAIP3-210ENST00000620204 LHX4Q969G2 390 aa8.54□□□□□ -1.04
TNFAIP3-210ENST00000620204 GNPNAT1Q96EK6 184 aaPredicted RBP8.54□□□□□ -1.04
TNFAIP3-210ENST00000620204 SPOCK3Q9BQ16 436 aa8.54□□□□□ -1.04
TNFAIP3-210ENST00000620204 PLEKHF2Q9H8W4 249 aa8.54□□□□□ -1.04
TNFAIP3-210ENST00000620204 CALHM2Q9HA72 323 aa8.54□□□□□ -1.04
TNFAIP3-210ENST00000620204 RBM7Q9Y580 266 aaKnown RBP8.54□□□□□ -1.04
TNFAIP3-210ENST00000620204 CRYM-AS1A6NIL9 109 aa8.53□□□□□ -1.04
TNFAIP3-210ENST00000620204 IL18BPO95998 194 aa8.53□□□□□ -1.04
TNFAIP3-210ENST00000620204 METTL15P1P0C7V9 234 aa8.53□□□□□ -1.04
TNFAIP3-210ENST00000620204 RPS21P63220 83 aaKnown RBP8.53□□□□□ -1.04
TNFAIP3-210ENST00000620204 C16orf47Q6ZP98 133 aaPredicted RBP8.53□□□□□ -1.04
TNFAIP3-210ENST00000620204 LIAT1Q6ZQX7 453 aa8.53□□□□□ -1.04
TNFAIP3-210ENST00000620204 RTL10Q7L3V2 364 aa8.53□□□□□ -1.04
TNFAIP3-210ENST00000620204 ERASQ7Z444 233 aa8.53□□□□□ -1.04
TNFAIP3-210ENST00000620204 OR8B12Q8NGG6 310 aa8.53□□□□□ -1.04
TNFAIP3-210ENST00000620204 OR4F5Q8NH21 305 aa8.53□□□□□ -1.04
TNFAIP3-210ENST00000620204 NAT6Q93015 286 aa8.53□□□□□ -1.04
TNFAIP3-210ENST00000620204 OR4F4Q96R69 305 aa8.53□□□□□ -1.04
TNFAIP3-210ENST00000620204 ACTR3CQ9C0K3 210 aaPredicted RBP8.53□□□□□ -1.04
TNFAIP3-210ENST00000620204 SLC39A9Q9NUM3 307 aa8.53□□□□□ -1.04
TNFAIP3-210ENST00000620204 NECAP2Q9NVZ3 263 aa8.53□□□□□ -1.04
TNFAIP3-210ENST00000620204 CD207Q9UJ71 328 aa8.53□□□□□ -1.04
TNFAIP3-210ENST00000620204 ANXA10Q9UJ72 324 aa8.53□□□□□ -1.04
TNFAIP3-210ENST00000620204 C2CD4DB7Z1M9 353 aa8.53□□□□□ -1.04
TNFAIP3-210ENST00000620204 CHST1O43916 411 aa8.53□□□□□ -1.04
TNFAIP3-210ENST00000620204 OR2J2O76002 312 aa8.53□□□□□ -1.04
TNFAIP3-210ENST00000620204 IAPPP10997 89 aa8.53□□□□□ -1.04
TNFAIP3-210ENST00000620204 KRTDAPP60985 99 aa8.53□□□□□ -1.04
TNFAIP3-210ENST00000620204 RPS16P62249 146 aaKnown RBP8.53□□□□□ -1.04
TNFAIP3-210ENST00000620204 IZUMO4Q1ZYL8 232 aa8.53□□□□□ -1.04
TNFAIP3-210ENST00000620204 LHFPL1Q86WI0 220 aa8.53□□□□□ -1.04
TNFAIP3-210ENST00000620204 CLDND2Q8NHS1 167 aa8.53□□□□□ -1.04
TNFAIP3-210ENST00000620204 BTF3L4Q96K17 158 aa8.53□□□□□ -1.04
TNFAIP3-210ENST00000620204 OR51I2Q9H344 312 aa8.53□□□□□ -1.04
TNFAIP3-210ENST00000620204 ZNF286AQ9HBT8 521 aa8.53□□□□□ -1.04
TNFAIP3-210ENST00000620204 ZNF160Q9HCG1 818 aa8.53□□□□□ -1.04
TNFAIP3-210ENST00000620204 TUBD1Q9UJT1 453 aa8.53□□□□□ -1.04
TNFAIP3-210ENST00000620204 PCNX3Q9H6A9 2034 aa8.53□□□□□ -1.04
TNFAIP3-210ENST00000620204 ZNF816-ZNF321PA0A0X1KG74 233 aa8.53□□□□□ -1.04
TNFAIP3-210ENST00000620204 A0A1B0GU03 582 aa8.53□□□□□ -1.04
TNFAIP3-210ENST00000620204 TCRBV21S2A2A0A5A6 115 aa8.53□□□□□ -1.04
TNFAIP3-210ENST00000620204 NTSR1P30989 418 aa8.53□□□□□ -1.04
TNFAIP3-210ENST00000620204 TMEM241Q24JQ0 296 aa8.53□□□□□ -1.04
TNFAIP3-210ENST00000620204 ZNF776Q68DI1 518 aaPredicted RBP8.53□□□□□ -1.04
TNFAIP3-210ENST00000620204 TMEM256Q8N2U0 113 aa8.53□□□□□ -1.04
TNFAIP3-210ENST00000620204 TMEM171Q8WVE6 324 aa8.53□□□□□ -1.04
TNFAIP3-210ENST00000620204 BOD1Q96IK1 185 aa8.53□□□□□ -1.04
TNFAIP3-210ENST00000620204 YPEL4Q96NS1 127 aa8.53□□□□□ -1.04
TNFAIP3-210ENST00000620204 TP53RKQ96S44 253 aa8.53□□□□□ -1.04
TNFAIP3-210ENST00000620204 VAMP8Q9BV40 100 aa8.53□□□□□ -1.04
TNFAIP3-210ENST00000620204 ASCL3Q9NQ33 180 aa8.53□□□□□ -1.04
TNFAIP3-210ENST00000620204 TRAPPC1Q9Y5R8 145 aa8.53□□□□□ -1.04
TNFAIP3-210ENST00000620204 B4DEV8 164 aa8.52□□□□□ -1.04
TNFAIP3-210ENST00000620204 SMIM10L1P0DMW3 83 aa8.52□□□□□ -1.04
TNFAIP3-210ENST00000620204 HSD11B2P80365 405 aa8.52□□□□□ -1.04
TNFAIP3-210ENST00000620204 QRFPP83859 136 aa8.52□□□□□ -1.04
TNFAIP3-210ENST00000620204 FAM78BQ5VT40 261 aa8.52□□□□□ -1.04
TNFAIP3-210ENST00000620204 ZNF775Q96BV0 537 aaPredicted RBP8.52□□□□□ -1.04
TNFAIP3-210ENST00000620204 R3HDM4Q96D70 268 aa8.52□□□□□ -1.04
TNFAIP3-210ENST00000620204 SMIM10Q96HG1 83 aa8.52□□□□□ -1.04
TNFAIP3-210ENST00000620204 SMDT1Q9H4I9 107 aa8.52□□□□□ -1.04
TNFAIP3-210ENST00000620204 SRD5A3Q9H8P0 318 aa8.52□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms