RNA–Protein interactions for RNA: ENST00000619644.4

SMTN-223, Transcript of smoothelin, human

TSL 2 BASIC

Gene SMTN, Length 3,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMTN-223	ENST00000619644	SSC4D	Q8WTU2	575 aa		12.54	□□□□□ -0.4
SMTN-223	ENST00000619644	HPSE2	Q8WWQ2	592 aa		12.54	□□□□□ -0.4
SMTN-223	ENST00000619644	NABP1	Q96AH0	204 aa		12.54	□□□□□ -0.4
SMTN-223	ENST00000619644	SRXN1	Q9BYN0	137 aa		12.54	□□□□□ -0.4
SMTN-223	ENST00000619644	HS3ST3B1	Q9Y662	390 aa		12.54	□□□□□ -0.4
SMTN-223	ENST00000619644	BTBD17	A6NE02	478 aa		12.54	□□□□□ -0.4
SMTN-223	ENST00000619644	ERVFRD-1	P60508	538 aa		12.54	□□□□□ -0.4
SMTN-223	ENST00000619644	PKIA	P61925	76 aa		12.54	□□□□□ -0.4
SMTN-223	ENST00000619644	NKX6-1	P78426	367 aa	Predicted RBP	12.54	□□□□□ -0.4
SMTN-223	ENST00000619644	SSX2	Q16385	188 aa		12.54	□□□□□ -0.4
SMTN-223	ENST00000619644	KCNMB1	Q16558	191 aa		12.54	□□□□□ -0.4
SMTN-223	ENST00000619644	GPR137C	Q8N3F9	429 aa		12.54	□□□□□ -0.4
SMTN-223	ENST00000619644	TMEM217	Q8N7C4	229 aa		12.54	□□□□□ -0.4
SMTN-223	ENST00000619644	LFNG	Q8NES3	379 aa		12.54	□□□□□ -0.4
SMTN-223	ENST00000619644	OR10AD1	Q8NGE0	317 aa		12.54	□□□□□ -0.4
SMTN-223	ENST00000619644	RNASE11	Q8TAA1	199 aa	Known RBP	12.54	□□□□□ -0.4
SMTN-223	ENST00000619644	BCO1	Q9HAY6	547 aa		12.54	□□□□□ -0.4
SMTN-223	ENST00000619644	COL5A1	P20908	1838 aa	Predicted RBP	12.54	□□□□□ -0.4
SMTN-223	ENST00000619644	ZNF407	Q9C0G0	2248 aa		12.54	□□□□□ -0.4
SMTN-223	ENST00000619644	EXPH5	Q8NEV8	1989 aa		12.54	□□□□□ -0.4
SMTN-223	ENST00000619644	TGIF2-C20orf24	A0A0A6YYL0	155 aa		12.54	□□□□□ -0.4
SMTN-223	ENST00000619644	TSTD3	H0UI37	97 aa		12.54	□□□□□ -0.4
SMTN-223	ENST00000619644	GNMT	Q14749	295 aa		12.54	□□□□□ -0.4
SMTN-223	ENST00000619644	CNN3	Q15417	329 aa	Known RBP	12.54	□□□□□ -0.4
SMTN-223	ENST00000619644	TM2D1	Q9BX74	207 aa		12.54	□□□□□ -0.4
SMTN-223	ENST00000619644	SEMA5B	Q9P283	1151 aa		12.54	□□□□□ -0.4
SMTN-223	ENST00000619644	TMED3	Q9Y3Q3	217 aa		12.54	□□□□□ -0.4
SMTN-223	ENST00000619644	ETV2	O00321	342 aa	Predicted RBP	12.53	□□□□□ -0.4
SMTN-223	ENST00000619644	TNFSF12	O43508	249 aa		12.53	□□□□□ -0.4
SMTN-223	ENST00000619644	FABP4	P15090	132 aa		12.53	□□□□□ -0.4
SMTN-223	ENST00000619644	SSR4	P51571	173 aa		12.53	□□□□□ -0.4
SMTN-223	ENST00000619644	UBE2K	P61086	200 aa		12.53	□□□□□ -0.4
SMTN-223	ENST00000619644	ZNF468	Q5VIY5	522 aa	Predicted RBP	12.53	□□□□□ -0.4
SMTN-223	ENST00000619644	SSX3	Q99909	188 aa		12.53	□□□□□ -0.4
SMTN-223	ENST00000619644	SLC7A11	Q9UPY5	501 aa		12.53	□□□□□ -0.4
SMTN-223	ENST00000619644	UBE2J1	Q9Y385	318 aa	Predicted RBP	12.53	□□□□□ -0.4
SMTN-223	ENST00000619644		H0YL77	283 aa		12.53	□□□□□ -0.4
SMTN-223	ENST00000619644	RPL36A-HNRNPH2	H7BZ11	118 aa		12.53	□□□□□ -0.4
SMTN-223	ENST00000619644	MSTN	O14793	375 aa		12.53	□□□□□ -0.4
SMTN-223	ENST00000619644	CXCL13	O43927	109 aa		12.53	□□□□□ -0.4
SMTN-223	ENST00000619644	GPR137B	O60478	399 aa		12.53	□□□□□ -0.4
SMTN-223	ENST00000619644	TRGC2	P03986	189 aa		12.53	□□□□□ -0.4
SMTN-223	ENST00000619644	CCL4	P13236	92 aa		12.53	□□□□□ -0.4
SMTN-223	ENST00000619644	RGS19	P49795	217 aa		12.53	□□□□□ -0.4
SMTN-223	ENST00000619644	CCL20	P78556	96 aa		12.53	□□□□□ -0.4
SMTN-223	ENST00000619644	MALL	Q13021	153 aa		12.53	□□□□□ -0.4
SMTN-223	ENST00000619644	HIKESHI	Q53FT3	197 aa		12.53	□□□□□ -0.4
SMTN-223	ENST00000619644	RTL6	Q6ICC9	239 aa		12.53	□□□□□ -0.4
SMTN-223	ENST00000619644	SLC16A14	Q7RTX9	510 aa		12.53	□□□□□ -0.4
SMTN-223	ENST00000619644	OSR2	Q8N2R0	312 aa		12.53	□□□□□ -0.4
SMTN-223	ENST00000619644	FADS6	Q8N9I5	356 aa		12.53	□□□□□ -0.4
SMTN-223	ENST00000619644	ZFP62	Q8NB50	900 aa	Predicted RBP	12.53	□□□□□ -0.4
SMTN-223	ENST00000619644	ZNF286A	Q9HBT8	521 aa		12.53	□□□□□ -0.4
SMTN-223	ENST00000619644	FAM24A	A6NFZ4	105 aa		12.52	□□□□□ -0.4
SMTN-223	ENST00000619644	OR5H1	A6NKK0	313 aa		12.52	□□□□□ -0.4
SMTN-223	ENST00000619644	FOXI3	A8MTJ6	420 aa	Predicted RBP	12.52	□□□□□ -0.4
SMTN-223	ENST00000619644		K7N7A8	449 aa		12.52	□□□□□ -0.4
SMTN-223	ENST00000619644	TERT	O14746	1132 aa	Known RBP	12.52	□□□□□ -0.4
SMTN-223	ENST00000619644	CYB5B	O43169	146 aa		12.52	□□□□□ -0.4
SMTN-223	ENST00000619644	ST8SIA3	O43173	380 aa		12.52	□□□□□ -0.4
SMTN-223	ENST00000619644	BTF3	P20290	206 aa	Known RBP	12.52	□□□□□ -0.4
SMTN-223	ENST00000619644	DUSP1	P28562	367 aa		12.52	□□□□□ -0.4
SMTN-223	ENST00000619644	CXCL12	P48061	93 aa		12.52	□□□□□ -0.4
SMTN-223	ENST00000619644	HAGH	Q16775	308 aa		12.52	□□□□□ -0.4
SMTN-223	ENST00000619644	AAED1	Q7RTV5	226 aa		12.52	□□□□□ -0.4
SMTN-223	ENST00000619644	RPS19BP1	Q86WX3	136 aa	Known RBP	12.52	□□□□□ -0.4
SMTN-223	ENST00000619644	OR1F12	Q8NHA8	337 aa		12.52	□□□□□ -0.4
SMTN-223	ENST00000619644	SYT3	Q9BQG1	590 aa		12.52	□□□□□ -0.4
SMTN-223	ENST00000619644	SMOC1	Q9H4F8	434 aa		12.52	□□□□□ -0.4
SMTN-223	ENST00000619644	IGLV3-32	A0A0A0MS00	114 aa		12.52	□□□□□ -0.41
SMTN-223	ENST00000619644		A0A1B0GW64	132 aa		12.52	□□□□□ -0.41
SMTN-223	ENST00000619644	CDRT15L2	A8MXV6	281 aa		12.52	□□□□□ -0.41
SMTN-223	ENST00000619644	ZIC3	O60481	467 aa		12.52	□□□□□ -0.41
SMTN-223	ENST00000619644	CCL2	P13500	99 aa		12.52	□□□□□ -0.41
SMTN-223	ENST00000619644	LIF	P15018	202 aa		12.52	□□□□□ -0.41
SMTN-223	ENST00000619644	ECI1	P42126	302 aa		12.52	□□□□□ -0.41
SMTN-223	ENST00000619644	CARD18	P57730	90 aa		12.52	□□□□□ -0.41
SMTN-223	ENST00000619644	PCOLCE	Q15113	449 aa		12.52	□□□□□ -0.41
SMTN-223	ENST00000619644	SLC25A26	Q70HW3	274 aa		12.52	□□□□□ -0.41
SMTN-223	ENST00000619644	IGKV1-12	A0A0C4DH73	117 aa		12.52	□□□□□ -0.41
SMTN-223	ENST00000619644	IFNA10	P01566	189 aa		12.52	□□□□□ -0.41
SMTN-223	ENST00000619644	IGKV1D-12	P01611	117 aa		12.52	□□□□□ -0.41
SMTN-223	ENST00000619644	AADAC	P22760	399 aa		12.52	□□□□□ -0.41
SMTN-223	ENST00000619644	DSCR4	P56555	118 aa	Predicted RBP	12.52	□□□□□ -0.41
SMTN-223	ENST00000619644	DLK1	P80370	383 aa		12.52	□□□□□ -0.41
SMTN-223	ENST00000619644	H3F3A	P84243	136 aa		12.52	□□□□□ -0.41
SMTN-223	ENST00000619644	SRY	Q05066	204 aa		12.52	□□□□□ -0.41
SMTN-223	ENST00000619644	TMEM187	Q14656	261 aa		12.52	□□□□□ -0.41
SMTN-223	ENST00000619644	CEACAM16	Q2WEN9	425 aa		12.52	□□□□□ -0.41
SMTN-223	ENST00000619644	LGI3	Q8N145	548 aa		12.52	□□□□□ -0.41
SMTN-223	ENST00000619644	SLC35G3	Q8N808	338 aa		12.52	□□□□□ -0.41
SMTN-223	ENST00000619644	NSG1	A0A0A6YYJ2	146 aa		12.51	□□□□□ -0.41
SMTN-223	ENST00000619644	RBFOX3	A6NFN3	312 aa		12.51	□□□□□ -0.41
SMTN-223	ENST00000619644		C9J4A7	227 aa		12.51	□□□□□ -0.41
SMTN-223	ENST00000619644	SSSCA1	O60232	199 aa		12.51	□□□□□ -0.41
SMTN-223	ENST00000619644	VAMP5	O95183	116 aa		12.51	□□□□□ -0.41
SMTN-223	ENST00000619644	OTX2	P32243	289 aa		12.51	□□□□□ -0.41
SMTN-223	ENST00000619644	ZNF92	Q03936	586 aa		12.51	□□□□□ -0.41
SMTN-223	ENST00000619644	OR2T2	Q6IF00	324 aa		12.51	□□□□□ -0.41
SMTN-223	ENST00000619644	P4HA3	Q7Z4N8	544 aa		12.51	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms