RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 BOLLQ8N9W6 283 aaKnown RBP6.61□□□□□ -1.35
NEK3-207ENST00000617054 C1orf162Q8NEQ5 155 aaPredicted RBP6.61□□□□□ -1.35
NEK3-207ENST00000617054 OR2Z1Q8NG97 314 aa6.61□□□□□ -1.35
NEK3-207ENST00000617054 TECTBQ96PL2 329 aa6.61□□□□□ -1.35
NEK3-207ENST00000617054 UTP20O75691 2785 aaKnown RBP6.61□□□□□ -1.35
NEK3-207ENST00000617054 HRNRQ86YZ3 2850 aaPredicted RBP6.61□□□□□ -1.35
NEK3-207ENST00000617054 hCG_1807616A0A1W2PRN6 198 aa6.61□□□□□ -1.35
NEK3-207ENST00000617054 BET1O15155 118 aa6.61□□□□□ -1.35
NEK3-207ENST00000617054 PRAF2O60831 178 aa6.61□□□□□ -1.35
NEK3-207ENST00000617054 SCTP09683 121 aa6.61□□□□□ -1.35
NEK3-207ENST00000617054 OR5H8P0DN80 308 aa6.61□□□□□ -1.35
NEK3-207ENST00000617054 NAT1P18440 290 aa6.61□□□□□ -1.35
NEK3-207ENST00000617054 TIMM23BQ5SRD1 257 aa6.61□□□□□ -1.35
NEK3-207ENST00000617054 SUMF2Q8NBJ7 301 aa6.61□□□□□ -1.35
NEK3-207ENST00000617054 OR8G5Q8NG78 346 aa6.61□□□□□ -1.35
NEK3-207ENST00000617054 OR2AK2Q8NG84 335 aa6.61□□□□□ -1.35
NEK3-207ENST00000617054 ZNF431Q8TF32 576 aaPredicted RBP6.61□□□□□ -1.35
NEK3-207ENST00000617054 PLPPR2Q96GM1 343 aa6.61□□□□□ -1.35
NEK3-207ENST00000617054 RTBDNQ9BSG5 229 aaPredicted RBP6.61□□□□□ -1.35
NEK3-207ENST00000617054 RTL8AQ9BWD3 113 aa6.61□□□□□ -1.35
NEK3-207ENST00000617054 SFXN3Q9BWM7 321 aa6.61□□□□□ -1.35
NEK3-207ENST00000617054 IL36GQ9NZH8 169 aa6.61□□□□□ -1.35
NEK3-207ENST00000617054 PAIP2BQ9ULR5 123 aaKnown RBP6.61□□□□□ -1.35
NEK3-207ENST00000617054 CACNA1BQ00975 2339 aa6.61□□□□□ -1.35
NEK3-207ENST00000617054 IGSF10Q6WRI0 2623 aa6.61□□□□□ -1.35
NEK3-207ENST00000617054 CRYBG3Q68DQ2 2970 aa6.61□□□□□ -1.35
NEK3-207ENST00000617054 TRAV24A0A0B4J272 114 aa6.61□□□□□ -1.35
NEK3-207ENST00000617054 MPTX1A8MV57 137 aa6.61□□□□□ -1.35
NEK3-207ENST00000617054 IQCF6A8MYZ5 107 aa6.61□□□□□ -1.35
NEK3-207ENST00000617054 SIAH2O43255 324 aa6.61□□□□□ -1.35
NEK3-207ENST00000617054 NXPH2O95156 264 aa6.61□□□□□ -1.35
NEK3-207ENST00000617054 IL5P05113 134 aa6.61□□□□□ -1.35
NEK3-207ENST00000617054 DNASE1P24855 282 aa6.61□□□□□ -1.35
NEK3-207ENST00000617054 SEC61A1P61619 476 aaKnown RBP6.61□□□□□ -1.35
NEK3-207ENST00000617054 CDSNQ15517 529 aa6.61□□□□□ -1.35
NEK3-207ENST00000617054 FAM189A2Q15884 450 aa6.61□□□□□ -1.35
NEK3-207ENST00000617054 SEZ6L2Q6UXD5 910 aa6.61□□□□□ -1.35
NEK3-207ENST00000617054 TMEM230Q96A57 120 aa6.61□□□□□ -1.35
NEK3-207ENST00000617054 OPA3Q9H6K4 179 aa6.61□□□□□ -1.35
NEK3-207ENST00000617054 SLC23A1Q9UHI7 598 aa6.61□□□□□ -1.35
NEK3-207ENST00000617054 HSF4Q9ULV5 492 aa6.61□□□□□ -1.35
NEK3-207ENST00000617054 AKAP6Q13023 2319 aa6.6□□□□□ -1.35
NEK3-207ENST00000617054 C9orf170A2RU37 121 aa6.6□□□□□ -1.35
NEK3-207ENST00000617054 J3QL48 77 aa6.6□□□□□ -1.35
NEK3-207ENST00000617054 SPRY3O43610 288 aa6.6□□□□□ -1.35
NEK3-207ENST00000617054 CRYAAP02489 173 aa6.6□□□□□ -1.35
NEK3-207ENST00000617054 MECP2P51608 486 aaKnown RBP6.6□□□□□ -1.35
NEK3-207ENST00000617054 ATXN7L3Q14CW9 347 aaPredicted RBP6.6□□□□□ -1.35
NEK3-207ENST00000617054 TMEM95Q3KNT9 176 aa6.6□□□□□ -1.35
NEK3-207ENST00000617054 ZNF718Q3SXZ3 478 aa6.6□□□□□ -1.35
NEK3-207ENST00000617054 FAM201AQ5SY85 155 aa6.6□□□□□ -1.35
NEK3-207ENST00000617054 RGS7BPQ6MZT1 257 aaPredicted RBP6.6□□□□□ -1.35
NEK3-207ENST00000617054 FAM53AQ6NSI3 398 aaPredicted RBP6.6□□□□□ -1.35
NEK3-207ENST00000617054 C16orf54Q6UWD8 224 aa6.6□□□□□ -1.35
NEK3-207ENST00000617054 TGIF2LYQ8IUE0 185 aa6.6□□□□□ -1.35
NEK3-207ENST00000617054 C11orf53Q8IXP5 236 aa6.6□□□□□ -1.35
NEK3-207ENST00000617054 C12orf45Q8N5I9 185 aaPredicted RBP6.6□□□□□ -1.35
NEK3-207ENST00000617054 TPRX1Q8N7U7 411 aa6.6□□□□□ -1.35
NEK3-207ENST00000617054 MRPS24Q96EL2 167 aaKnown RBP6.6□□□□□ -1.35
NEK3-207ENST00000617054 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.6□□□□□ -1.35
NEK3-207ENST00000617054 SLC2A8Q9NY64 477 aa6.6□□□□□ -1.35
NEK3-207ENST00000617054 ANAPC10Q9UM13 185 aa6.6□□□□□ -1.35
NEK3-207ENST00000617054 CSMD2Q7Z408 3487 aa6.6□□□□□ -1.35
NEK3-207ENST00000617054 HIVEP3Q5T1R4 2406 aa6.6□□□□□ -1.35
NEK3-207ENST00000617054 C13orf42A0A1B0GVH6 325 aa6.6□□□□□ -1.35
NEK3-207ENST00000617054 OR5B21A6NL26 309 aa6.6□□□□□ -1.35
NEK3-207ENST00000617054 ADAP1O75689 374 aa6.6□□□□□ -1.35
NEK3-207ENST00000617054 CRHP06850 196 aa6.6□□□□□ -1.35
NEK3-207ENST00000617054 FCGR2CP31995 323 aa6.6□□□□□ -1.35
NEK3-207ENST00000617054 AP2S1P53680 142 aaPredicted RBP6.6□□□□□ -1.35
NEK3-207ENST00000617054 SP6Q3SY56 376 aa6.6□□□□□ -1.35
NEK3-207ENST00000617054 FAM76BQ5HYJ3 339 aa6.6□□□□□ -1.35
NEK3-207ENST00000617054 VAX1Q5SQQ9 334 aa6.6□□□□□ -1.35
NEK3-207ENST00000617054 SLC25A42Q86VD7 318 aa6.6□□□□□ -1.35
NEK3-207ENST00000617054 DEDD2Q8WXF8 326 aa6.6□□□□□ -1.35
NEK3-207ENST00000617054 ZNF107Q9UII5 783 aaPredicted RBP6.6□□□□□ -1.35
NEK3-207ENST00000617054 GPR132Q9UNW8 380 aa6.6□□□□□ -1.35
NEK3-207ENST00000617054 OSGIN2Q9Y236 505 aa6.6□□□□□ -1.35
NEK3-207ENST00000617054 FLNCQ14315 2725 aa6.6□□□□□ -1.35
NEK3-207ENST00000617054 SNRPGP15A8MWD9 76 aa6.59□□□□□ -1.35
NEK3-207ENST00000617054 MCRIP1C9JLW8 97 aa6.59□□□□□ -1.35
NEK3-207ENST00000617054 DEGS1O15121 323 aa6.59□□□□□ -1.35
NEK3-207ENST00000617054 ZBTB25P24278 435 aa6.59□□□□□ -1.35
NEK3-207ENST00000617054 CD34P28906 385 aa6.59□□□□□ -1.35
NEK3-207ENST00000617054 CBX5P45973 191 aa6.59□□□□□ -1.35
NEK3-207ENST00000617054 IL24Q13007 206 aa6.59□□□□□ -1.35
NEK3-207ENST00000617054 CDK10Q15131 360 aa6.59□□□□□ -1.35
NEK3-207ENST00000617054 LGALSLQ3ZCW2 172 aaPredicted RBP6.59□□□□□ -1.35
NEK3-207ENST00000617054 PHLDA2Q53GA4 152 aa6.59□□□□□ -1.35
NEK3-207ENST00000617054 LY6G6FQ5SQ64 297 aa6.59□□□□□ -1.35
NEK3-207ENST00000617054 TMEM200AQ86VY9 491 aa6.59□□□□□ -1.35
NEK3-207ENST00000617054 OR11L1Q8NGX0 322 aa6.59□□□□□ -1.35
NEK3-207ENST00000617054 IL1F10Q8WWZ1 152 aa6.59□□□□□ -1.35
NEK3-207ENST00000617054 MED30Q96HR3 178 aa6.59□□□□□ -1.35
NEK3-207ENST00000617054 BCL2L14Q9BZR8 327 aa6.59□□□□□ -1.35
NEK3-207ENST00000617054 C12orf4Q9NQ89 552 aa6.59□□□□□ -1.35
NEK3-207ENST00000617054 ANKHD1Q8IWZ3 2542 aaKnown RBP6.59□□□□□ -1.35
NEK3-207ENST00000617054 ZSCAN5BA6NJL1 495 aa6.59□□□□□ -1.35
NEK3-207ENST00000617054 C16orf97H3BN30 126 aa6.59□□□□□ -1.35
NEK3-207ENST00000617054 J3QT63 122 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 175.8 ms