RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 BAXQ07812 192 aa11.44□□□□□ -0.58
PPP4R3B-206ENST00000616407 PDLIM3Q53GG5 364 aaPredicted RBP11.44□□□□□ -0.58
PPP4R3B-206ENST00000616407 SLC36A1Q7Z2H8 476 aa11.44□□□□□ -0.58
PPP4R3B-206ENST00000616407 C20orf24Q9BUV8 137 aa11.44□□□□□ -0.58
PPP4R3B-206ENST00000616407 DECR2Q9NUI1 292 aa11.44□□□□□ -0.58
PPP4R3B-206ENST00000616407 GFOD1Q9NXC2 390 aa11.44□□□□□ -0.58
PPP4R3B-206ENST00000616407 OR2A4O95047 310 aa11.44□□□□□ -0.58
PPP4R3B-206ENST00000616407 KRASP01116 189 aa11.44□□□□□ -0.58
PPP4R3B-206ENST00000616407 CD82P27701 267 aa11.44□□□□□ -0.58
PPP4R3B-206ENST00000616407 F2RL1P55085 397 aa11.44□□□□□ -0.58
PPP4R3B-206ENST00000616407 TMEM33P57088 247 aa11.44□□□□□ -0.58
PPP4R3B-206ENST00000616407 ANGPTL6Q8NI99 470 aa11.44□□□□□ -0.58
PPP4R3B-206ENST00000616407 SLC25A40Q8TBP6 338 aa11.44□□□□□ -0.58
PPP4R3B-206ENST00000616407 H1FXQ92522 213 aaKnown RBP11.44□□□□□ -0.58
PPP4R3B-206ENST00000616407 PHYHIPLQ96FC7 376 aa11.44□□□□□ -0.58
PPP4R3B-206ENST00000616407 OR2A7Q96R45 310 aa11.44□□□□□ -0.58
PPP4R3B-206ENST00000616407 CD37P11049 281 aa11.44□□□□□ -0.58
PPP4R3B-206ENST00000616407 C2orf68Q2NKX9 166 aa11.44□□□□□ -0.58
PPP4R3B-206ENST00000616407 ZNF385CQ66K41 422 aaPredicted RBP11.44□□□□□ -0.58
PPP4R3B-206ENST00000616407 LIAT1Q6ZQX7 453 aa11.44□□□□□ -0.58
PPP4R3B-206ENST00000616407 SLC25A28Q96A46 364 aa11.44□□□□□ -0.58
PPP4R3B-206ENST00000616407 GMPPAQ96IJ6 420 aaPredicted RBP11.44□□□□□ -0.58
PPP4R3B-206ENST00000616407 NARFLQ9H6Q4 476 aa11.44□□□□□ -0.58
PPP4R3B-206ENST00000616407 DEPPQ9NTK1 212 aa11.44□□□□□ -0.58
PPP4R3B-206ENST00000616407 FAM24AA6NFZ4 105 aa11.44□□□□□ -0.58
PPP4R3B-206ENST00000616407 TRDCB7Z8K6 153 aa11.44□□□□□ -0.58
PPP4R3B-206ENST00000616407 MPPED1O15442 326 aa11.44□□□□□ -0.58
PPP4R3B-206ENST00000616407 GPR12P47775 334 aa11.44□□□□□ -0.58
PPP4R3B-206ENST00000616407 ELLP55199 621 aaPredicted RBP11.44□□□□□ -0.58
PPP4R3B-206ENST00000616407 ZNF816Q0VGE8 651 aaPredicted RBP11.44□□□□□ -0.58
PPP4R3B-206ENST00000616407 MPV17LQ2QL34 196 aa11.44□□□□□ -0.58
PPP4R3B-206ENST00000616407 TBC1D26Q86UD7 250 aa11.44□□□□□ -0.58
PPP4R3B-206ENST00000616407 ZNF703Q9H7S9 590 aaPredicted RBP11.44□□□□□ -0.58
PPP4R3B-206ENST00000616407 RHOFQ9HBH0 211 aa11.44□□□□□ -0.58
PPP4R3B-206ENST00000616407 ATP23Q9Y6H3 246 aa11.44□□□□□ -0.58
PPP4R3B-206ENST00000616407 ROS1P08922 2347 aa11.43□□□□□ -0.58
PPP4R3B-206ENST00000616407 MFNGO00587 321 aa11.43□□□□□ -0.58
PPP4R3B-206ENST00000616407 ACKR3P25106 362 aa11.43□□□□□ -0.58
PPP4R3B-206ENST00000616407 PRAMEF5Q5TYX0 476 aa11.43□□□□□ -0.58
PPP4R3B-206ENST00000616407 PRAMEF6Q5VXH4 476 aa11.43□□□□□ -0.58
PPP4R3B-206ENST00000616407 RPUSD3Q6P087 351 aaKnown RBP11.43□□□□□ -0.58
PPP4R3B-206ENST00000616407 TMEM88Q6PEY1 159 aa11.43□□□□□ -0.58
PPP4R3B-206ENST00000616407 THNSL2Q86YJ6 484 aa11.43□□□□□ -0.58
PPP4R3B-206ENST00000616407 TMEM123Q8N131 208 aa11.43□□□□□ -0.58
PPP4R3B-206ENST00000616407 GAPTQ8N292 157 aa11.43□□□□□ -0.58
PPP4R3B-206ENST00000616407 OR10V1Q8NGI7 309 aa11.43□□□□□ -0.58
PPP4R3B-206ENST00000616407 CCL28Q9NRJ3 127 aa11.43□□□□□ -0.58
PPP4R3B-206ENST00000616407 NUDT19A8MXV4 375 aa11.43□□□□□ -0.58
PPP4R3B-206ENST00000616407 J3QT63 122 aa11.43□□□□□ -0.58
PPP4R3B-206ENST00000616407 TMEM50BP56557 158 aa11.43□□□□□ -0.58
PPP4R3B-206ENST00000616407 UBE2KP61086 200 aa11.43□□□□□ -0.58
PPP4R3B-206ENST00000616407 POLR2GP62487 172 aaKnown RBP eCLIP11.43□□□□□ -0.58
PPP4R3B-206ENST00000616407 CEACAM21Q3KPI0 293 aa11.43□□□□□ -0.58
PPP4R3B-206ENST00000616407 ZNF610Q8N9Z0 462 aa11.43□□□□□ -0.58
PPP4R3B-206ENST00000616407 GNPNAT1Q96EK6 184 aaPredicted RBP11.43□□□□□ -0.58
PPP4R3B-206ENST00000616407 C5orf66Q9H5L9 145 aa11.43□□□□□ -0.58
PPP4R3B-206ENST00000616407 RASL12Q9NYN1 266 aa11.43□□□□□ -0.58
PPP4R3B-206ENST00000616407 ZNF106Q9H2Y7 1883 aaKnown RBP11.43□□□□□ -0.58
PPP4R3B-206ENST00000616407 ZFP92A6NM28 416 aa11.43□□□□□ -0.58
PPP4R3B-206ENST00000616407 DHRS7CA6NNS2 312 aa11.43□□□□□ -0.58
PPP4R3B-206ENST00000616407 RPL36A-HNRNPH2H7BZ11 118 aa11.43□□□□□ -0.58
PPP4R3B-206ENST00000616407 ZP3P21754 424 aa11.43□□□□□ -0.58
PPP4R3B-206ENST00000616407 Q96M66 194 aa11.43□□□□□ -0.58
PPP4R3B-206ENST00000616407 LINC00052Q96N35 136 aa11.43□□□□□ -0.58
PPP4R3B-206ENST00000616407 LRRC30A6NM36 301 aa11.42□□□□□ -0.58
PPP4R3B-206ENST00000616407 S100PP25815 95 aa11.42□□□□□ -0.58
PPP4R3B-206ENST00000616407 OR3A1P47881 315 aa11.42□□□□□ -0.58
PPP4R3B-206ENST00000616407 OR5B12Q96R08 314 aa11.42□□□□□ -0.58
PPP4R3B-206ENST00000616407 DHRS9Q9BPW9 319 aa11.42□□□□□ -0.58
PPP4R3B-206ENST00000616407 PSENENQ9NZ42 101 aa11.42□□□□□ -0.58
PPP4R3B-206ENST00000616407 MED19A0JLT2 244 aaPredicted RBP11.42□□□□□ -0.58
PPP4R3B-206ENST00000616407 NPBWR2P48146 333 aa11.42□□□□□ -0.58
PPP4R3B-206ENST00000616407 HAGHQ16775 308 aa11.42□□□□□ -0.58
PPP4R3B-206ENST00000616407 IGSF11Q5DX21 431 aa11.42□□□□□ -0.58
PPP4R3B-206ENST00000616407 TMEM65Q6PI78 240 aa11.42□□□□□ -0.58
PPP4R3B-206ENST00000616407 MOB1BQ7L9L4 216 aa11.42□□□□□ -0.58
PPP4R3B-206ENST00000616407 BPIFCQ8NFQ6 507 aa11.42□□□□□ -0.58
PPP4R3B-206ENST00000616407 DEFB108AA8MXU0 73 aa11.42□□□□□ -0.58
PPP4R3B-206ENST00000616407 SYNGR3O43761 229 aa11.42□□□□□ -0.58
PPP4R3B-206ENST00000616407 SLC25A4P12235 298 aa11.42□□□□□ -0.58
PPP4R3B-206ENST00000616407 SNCAP37840 140 aa11.42□□□□□ -0.58
PPP4R3B-206ENST00000616407 TAGLNQ01995 201 aaKnown RBP11.42□□□□□ -0.58
PPP4R3B-206ENST00000616407 LCN15Q6UWW0 184 aa11.42□□□□□ -0.58
PPP4R3B-206ENST00000616407 OR2C3Q8N628 320 aa11.42□□□□□ -0.58
PPP4R3B-206ENST00000616407 BMPERQ8N8U9 685 aa11.42□□□□□ -0.58
PPP4R3B-206ENST00000616407 IGKV1-9A0A0C4DH69 117 aa11.42□□□□□ -0.58
PPP4R3B-206ENST00000616407 SYNGR1O43759 233 aa11.42□□□□□ -0.58
PPP4R3B-206ENST00000616407 MELTFP08582 738 aa11.42□□□□□ -0.58
PPP4R3B-206ENST00000616407 HOXA1P49639 335 aaPredicted RBP11.42□□□□□ -0.58
PPP4R3B-206ENST00000616407 HMGN3Q15651 99 aa11.42□□□□□ -0.58
PPP4R3B-206ENST00000616407 FAM214BQ7L5A3 538 aa11.42□□□□□ -0.58
PPP4R3B-206ENST00000616407 LRRC29Q8WV35 223 aa11.42□□□□□ -0.58
PPP4R3B-206ENST00000616407 MSL2Q9HCI7 577 aa11.42□□□□□ -0.58
PPP4R3B-206ENST00000616407 ZNF724A8MTY0 619 aa11.41□□□□□ -0.58
PPP4R3B-206ENST00000616407 TESK1Q15569 626 aa11.41□□□□□ -0.58
PPP4R3B-206ENST00000616407 GFRALQ6UXV0 394 aa11.41□□□□□ -0.58
PPP4R3B-206ENST00000616407 PAQR4Q8N4S7 273 aaPredicted RBP11.41□□□□□ -0.58
PPP4R3B-206ENST00000616407 LFNGQ8NES3 379 aa11.41□□□□□ -0.58
PPP4R3B-206ENST00000616407 MRGPRDQ8TDS7 321 aa11.41□□□□□ -0.58
PPP4R3B-206ENST00000616407 EGLN1Q9GZT9 426 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms