RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 AMY1AP04745 511 aa16.56■□□□□ 0.24
TRAPPC3-208ENST00000616074 AMY2AP04746 511 aa16.56■□□□□ 0.24
TRAPPC3-208ENST00000616074 HTR1AP08908 422 aa16.56■□□□□ 0.24
TRAPPC3-208ENST00000616074 PTGFRP43088 359 aa16.56■□□□□ 0.24
TRAPPC3-208ENST00000616074 ARHGDIBP52566 201 aa16.56■□□□□ 0.24
TRAPPC3-208ENST00000616074 SCN1BQ07699 218 aa16.56■□□□□ 0.24
TRAPPC3-208ENST00000616074 KPNB1Q14974 876 aaKnown RBP16.56■□□□□ 0.24
TRAPPC3-208ENST00000616074 HLA-DRB5Q30154 266 aa16.56■□□□□ 0.24
TRAPPC3-208ENST00000616074 UTF1Q5T230 341 aa16.56■□□□□ 0.24
TRAPPC3-208ENST00000616074 Q6P435 159 aa16.56■□□□□ 0.24
TRAPPC3-208ENST00000616074 KCTD20Q7Z5Y7 419 aa16.56■□□□□ 0.24
TRAPPC3-208ENST00000616074 OR13C3Q8NGS6 347 aa16.56■□□□□ 0.24
TRAPPC3-208ENST00000616074 NEK6Q9HC98 313 aa16.56■□□□□ 0.24
TRAPPC3-208ENST00000616074 IMPAD1Q9NX62 359 aa16.56■□□□□ 0.24
TRAPPC3-208ENST00000616074 ING3Q9NXR8 418 aa16.56■□□□□ 0.24
TRAPPC3-208ENST00000616074 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.56■□□□□ 0.24
TRAPPC3-208ENST00000616074 PCDHGB5Q9Y5G0 923 aa16.56■□□□□ 0.24
TRAPPC3-208ENST00000616074 COL7A1Q02388 2944 aa16.56■□□□□ 0.24
TRAPPC3-208ENST00000616074 BUB1B-PAK6H3BSN5 160 aa16.55■□□□□ 0.24
TRAPPC3-208ENST00000616074 SLC33A1O00400 549 aaPredicted RBP16.55■□□□□ 0.24
TRAPPC3-208ENST00000616074 MPIG6BO95866 241 aa16.55■□□□□ 0.24
TRAPPC3-208ENST00000616074 CSN2P05814 226 aa16.55■□□□□ 0.24
TRAPPC3-208ENST00000616074 CCR9P51686 369 aa16.55■□□□□ 0.24
TRAPPC3-208ENST00000616074 ATXN7L3Q14CW9 347 aaPredicted RBP16.55■□□□□ 0.24
TRAPPC3-208ENST00000616074 KRBOX4Q5JUW0 171 aa16.55■□□□□ 0.24
TRAPPC3-208ENST00000616074 TPTE2P1Q5T6R2 138 aa16.55■□□□□ 0.24
TRAPPC3-208ENST00000616074 TRUB1Q8WWH5 349 aaKnown RBP16.55■□□□□ 0.24
TRAPPC3-208ENST00000616074 DNAH9Q9NYC9 4486 aa16.55■□□□□ 0.24
TRAPPC3-208ENST00000616074 A0A087X0M5 115 aa16.54■□□□□ 0.24
TRAPPC3-208ENST00000616074 A0A1B0GX30 115 aa16.54■□□□□ 0.24
TRAPPC3-208ENST00000616074 OR4C45A6NMZ5 311 aa16.54■□□□□ 0.24
TRAPPC3-208ENST00000616074 LY6LH3BQJ8 138 aa16.54■□□□□ 0.24
TRAPPC3-208ENST00000616074 TOR1AO14656 332 aa16.54■□□□□ 0.24
TRAPPC3-208ENST00000616074 CEACAM3P40198 252 aa16.54■□□□□ 0.24
TRAPPC3-208ENST00000616074 SLC35A2P78381 396 aa16.54■□□□□ 0.24
TRAPPC3-208ENST00000616074 C17orf58Q2M2W7 97 aa16.54■□□□□ 0.24
TRAPPC3-208ENST00000616074 SAXO1Q8IYX7 474 aa16.54■□□□□ 0.24
TRAPPC3-208ENST00000616074 OR4X2Q8NGF9 303 aa16.54■□□□□ 0.24
TRAPPC3-208ENST00000616074 OR4D6Q8NGJ1 314 aa16.54■□□□□ 0.24
TRAPPC3-208ENST00000616074 PELI1Q96FA3 418 aa16.54■□□□□ 0.24
TRAPPC3-208ENST00000616074 C4orf36Q96KX1 117 aa16.54■□□□□ 0.24
TRAPPC3-208ENST00000616074 PPIL3Q9H2H8 161 aaKnown RBP16.54■□□□□ 0.24
TRAPPC3-208ENST00000616074 RHOFQ9HBH0 211 aa16.54■□□□□ 0.24
TRAPPC3-208ENST00000616074 ZNF729A6NN14 1252 aaPredicted RBP16.53■□□□□ 0.24
TRAPPC3-208ENST00000616074 J3QLW9 94 aa16.53■□□□□ 0.24
TRAPPC3-208ENST00000616074 K7EIL1 84 aa16.53■□□□□ 0.24
TRAPPC3-208ENST00000616074 ZNF19P17023 458 aa16.53■□□□□ 0.24
TRAPPC3-208ENST00000616074 OR3A4PP47883 348 aa16.53■□□□□ 0.24
TRAPPC3-208ENST00000616074 RASSF2P50749 326 aa16.53■□□□□ 0.24
TRAPPC3-208ENST00000616074 ALKBH1Q13686 389 aaKnown RBP16.53■□□□□ 0.24
TRAPPC3-208ENST00000616074 RBM39Q14498 530 aaKnown RBP16.53■□□□□ 0.24
TRAPPC3-208ENST00000616074 CDK5R1Q15078 307 aa16.53■□□□□ 0.24
TRAPPC3-208ENST00000616074 KHDC1LQ5JSQ8 128 aa16.53■□□□□ 0.24
TRAPPC3-208ENST00000616074 C9orf152Q5JTZ5 239 aa16.53■□□□□ 0.24
TRAPPC3-208ENST00000616074 CHST4Q8NCG5 386 aa16.53■□□□□ 0.24
TRAPPC3-208ENST00000616074 CREB3L1Q96BA8 519 aa16.53■□□□□ 0.24
TRAPPC3-208ENST00000616074 HRASLS5Q96KN8 279 aa16.53■□□□□ 0.24
TRAPPC3-208ENST00000616074 ZCCHC4Q9H5U6 513 aa16.53■□□□□ 0.24
TRAPPC3-208ENST00000616074 MYRFQ9Y2G1 1151 aa16.53■□□□□ 0.24
TRAPPC3-208ENST00000616074 DEGS1O15121 323 aa16.52■□□□□ 0.24
TRAPPC3-208ENST00000616074 PRRX1P54821 245 aa16.52■□□□□ 0.24
TRAPPC3-208ENST00000616074 ZP1P60852 638 aa16.52■□□□□ 0.24
TRAPPC3-208ENST00000616074 SNRPGP62308 76 aaKnown RBP16.52■□□□□ 0.24
TRAPPC3-208ENST00000616074 SLC25A30Q5SVS4 291 aa16.52■□□□□ 0.24
TRAPPC3-208ENST00000616074 ACBD7Q8N6N7 88 aa16.52■□□□□ 0.24
TRAPPC3-208ENST00000616074 RCC1LQ96I51 464 aaKnown RBP16.52■□□□□ 0.24
TRAPPC3-208ENST00000616074 INPP5EQ9NRR6 644 aa16.52■□□□□ 0.24
TRAPPC3-208ENST00000616074 OOSP1A8MZH6 123 aa16.51■□□□□ 0.23
TRAPPC3-208ENST00000616074 ALPLP05186 524 aa16.51■□□□□ 0.23
TRAPPC3-208ENST00000616074 HCKP08631 526 aa16.51■□□□□ 0.23
TRAPPC3-208ENST00000616074 NFYBP25208 207 aa16.51■□□□□ 0.23
TRAPPC3-208ENST00000616074 MNDAP41218 407 aa16.51■□□□□ 0.23
TRAPPC3-208ENST00000616074 MEDAGQ5VYS4 303 aa16.51■□□□□ 0.23
TRAPPC3-208ENST00000616074 CCDC144NLQ6NUI1 221 aa16.51■□□□□ 0.23
TRAPPC3-208ENST00000616074 KIRREL1Q96J84 757 aa16.51■□□□□ 0.23
TRAPPC3-208ENST00000616074 FAM53CQ9NYF3 392 aa16.51■□□□□ 0.23
TRAPPC3-208ENST00000616074 OR6C3Q9NZP0 311 aa16.51■□□□□ 0.23
TRAPPC3-208ENST00000616074 AASSQ9UDR5 926 aa16.51■□□□□ 0.23
TRAPPC3-208ENST00000616074 EXOGQ9Y2C4 368 aaKnown RBP16.51■□□□□ 0.23
TRAPPC3-208ENST00000616074 KBTBD11-OT1A0A1B0GTJ5 212 aa16.5■□□□□ 0.23
TRAPPC3-208ENST00000616074 E9PQ18 207 aa16.5■□□□□ 0.23
TRAPPC3-208ENST00000616074 M0QZK8 103 aa16.5■□□□□ 0.23
TRAPPC3-208ENST00000616074 HSPB6O14558 160 aa16.5■□□□□ 0.23
TRAPPC3-208ENST00000616074 CGB3P0DN86 165 aa16.5■□□□□ 0.23
TRAPPC3-208ENST00000616074 CGB7P0DN87 165 aa16.5■□□□□ 0.23
TRAPPC3-208ENST00000616074 TMEM225BP0DP42 221 aa16.5■□□□□ 0.23
TRAPPC3-208ENST00000616074 GLP1RP43220 463 aa16.5■□□□□ 0.23
TRAPPC3-208ENST00000616074 KRTAP10-11P60412 298 aa16.5■□□□□ 0.23
TRAPPC3-208ENST00000616074 KISS1Q15726 138 aa16.5■□□□□ 0.23
TRAPPC3-208ENST00000616074 ZIK1Q3SY52 487 aaPredicted RBP16.5■□□□□ 0.23
TRAPPC3-208ENST00000616074 OSR2Q8N2R0 312 aa16.5■□□□□ 0.23
TRAPPC3-208ENST00000616074 OR9G1Q8NH87 305 aa16.5■□□□□ 0.23
TRAPPC3-208ENST00000616074 PYDC1Q8WXC3 89 aa16.5■□□□□ 0.23
TRAPPC3-208ENST00000616074 LGALS12Q96DT0 336 aa16.5■□□□□ 0.23
TRAPPC3-208ENST00000616074 ALG8Q9BVK2 526 aa16.5■□□□□ 0.23
TRAPPC3-208ENST00000616074 MOB4Q9Y3A3 225 aa16.5■□□□□ 0.23
TRAPPC3-208ENST00000616074 HSPE1-MOB4S4R3N1 261 aa16.5■□□□□ 0.23
TRAPPC3-208ENST00000616074 FAM90A18PA6NE21 464 aa16.49■□□□□ 0.23
TRAPPC3-208ENST00000616074 FAM90A16PA6NEW6 464 aa16.49■□□□□ 0.23
TRAPPC3-208ENST00000616074 FAM90A20PA6NIJ5 464 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms