RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 TMEM191AQ9H0A3 160 aa11.24□□□□□ -0.61
TCF4-248ENST00000616053 RBMY1BA6NDE4 496 aaKnown RBP11.23□□□□□ -0.61
TCF4-248ENST00000616053 RBMY1EA6NEQ0 496 aaKnown RBP11.23□□□□□ -0.61
TCF4-248ENST00000616053 PITX3O75364 302 aa11.23□□□□□ -0.61
TCF4-248ENST00000616053 RBMY1DP0C7P1 496 aaKnown RBP11.23□□□□□ -0.61
TCF4-248ENST00000616053 RBMY1A1P0DJD3 496 aaKnown RBP11.23□□□□□ -0.61
TCF4-248ENST00000616053 RBMY1CP0DJD4 496 aa11.23□□□□□ -0.61
TCF4-248ENST00000616053 SUMO3P55854 103 aaPredicted RBP11.23□□□□□ -0.61
TCF4-248ENST00000616053 TCTAP57738 103 aa11.23□□□□□ -0.61
TCF4-248ENST00000616053 CLEC9AQ6UXN8 241 aa11.23□□□□□ -0.61
TCF4-248ENST00000616053 HIGD1AQ9Y241 93 aa11.23□□□□□ -0.61
TCF4-248ENST00000616053 DYSFO75923 2080 aa11.23□□□□□ -0.61
TCF4-248ENST00000616053 SHISA8B8ZZ34 492 aa11.23□□□□□ -0.61
TCF4-248ENST00000616053 TMEM99Q8N816 258 aa11.23□□□□□ -0.61
TCF4-248ENST00000616053 KIAA1217Q5T5P2 1943 aa11.23□□□□□ -0.61
TCF4-248ENST00000616053 SCN5AQ14524 2016 aa11.23□□□□□ -0.61
TCF4-248ENST00000616053 SH2D5Q6ZV89 423 aa11.23□□□□□ -0.61
TCF4-248ENST00000616053 OR8G5Q8NG78 346 aa11.23□□□□□ -0.61
TCF4-248ENST00000616053 DUX3Q96PT4 197 aa11.23□□□□□ -0.61
TCF4-248ENST00000616053 SLC52A3Q9NQ40 469 aa11.23□□□□□ -0.61
TCF4-248ENST00000616053 SLC35B4Q969S0 331 aa11.23□□□□□ -0.61
TCF4-248ENST00000616053 LMO7Q8WWI1 1683 aa11.23□□□□□ -0.61
TCF4-248ENST00000616053 IL9P15248 144 aa11.23□□□□□ -0.61
TCF4-248ENST00000616053 PRDX2P32119 198 aa11.23□□□□□ -0.61
TCF4-248ENST00000616053 GLIS1Q8NBF1 620 aa11.23□□□□□ -0.61
TCF4-248ENST00000616053 ZBTB44Q8NCP5 570 aa11.23□□□□□ -0.61
TCF4-248ENST00000616053 SLC25A46Q96AG3 418 aa11.23□□□□□ -0.61
TCF4-248ENST00000616053 GPR137Q96N19 417 aa11.23□□□□□ -0.61
TCF4-248ENST00000616053 PRR14Q9BWN1 585 aa11.23□□□□□ -0.61
TCF4-248ENST00000616053 LHX9Q9NQ69 397 aa11.23□□□□□ -0.61
TCF4-248ENST00000616053 K7ERU9 68 aa11.23□□□□□ -0.61
TCF4-248ENST00000616053 M0R143 59 aa11.23□□□□□ -0.61
TCF4-248ENST00000616053 B2MP61769 119 aa11.23□□□□□ -0.61
TCF4-248ENST00000616053 RPL31P62899 125 aaKnown RBP11.23□□□□□ -0.61
TCF4-248ENST00000616053 KRTCAP3Q53RY4 240 aa11.23□□□□□ -0.61
TCF4-248ENST00000616053 CBLL1Q75N03 491 aa11.23□□□□□ -0.61
TCF4-248ENST00000616053 NME4O00746 187 aa11.22□□□□□ -0.61
TCF4-248ENST00000616053 EGR3Q06889 387 aa11.22□□□□□ -0.61
TCF4-248ENST00000616053 CGB2Q6NT52 195 aa11.22□□□□□ -0.61
TCF4-248ENST00000616053 C1orf174Q8IYL3 243 aa11.22□□□□□ -0.61
TCF4-248ENST00000616053 CCL4L1Q8NHW4 92 aa11.22□□□□□ -0.61
TCF4-248ENST00000616053 MCHR2Q969V1 340 aa11.22□□□□□ -0.61
TCF4-248ENST00000616053 BCL9LQ86UU0 1499 aa11.22□□□□□ -0.61
TCF4-248ENST00000616053 NKX2-2O95096 273 aa11.22□□□□□ -0.61
TCF4-248ENST00000616053 LIMK1P53667 647 aa11.22□□□□□ -0.61
TCF4-248ENST00000616053 PLK5Q496M5 336 aa11.22□□□□□ -0.61
TCF4-248ENST00000616053 A4GALTQ9NPC4 353 aa11.22□□□□□ -0.61
TCF4-248ENST00000616053 TRBV7-9A0A0J9YWB2 115 aa11.22□□□□□ -0.61
TCF4-248ENST00000616053 FOXA1P55317 472 aa11.22□□□□□ -0.61
TCF4-248ENST00000616053 C8orf46Q8TAG6 207 aa11.22□□□□□ -0.61
TCF4-248ENST00000616053 C21orf140B9A014 251 aa11.22□□□□□ -0.61
TCF4-248ENST00000616053 HOXC11O43248 304 aaPredicted RBP11.22□□□□□ -0.61
TCF4-248ENST00000616053 PRSS45Q7RTY3 260 aa11.22□□□□□ -0.61
TCF4-248ENST00000616053 C2orf88Q9BSF0 95 aa11.22□□□□□ -0.61
TCF4-248ENST00000616053 LRRC61Q9BV99 259 aa11.22□□□□□ -0.61
TCF4-248ENST00000616053 CXorf36Q9H7Y0 433 aa11.22□□□□□ -0.61
TCF4-248ENST00000616053 BEX4Q9NWD9 120 aaPredicted RBP11.22□□□□□ -0.61
TCF4-248ENST00000616053 PPRC1Q5VV67 1664 aaKnown RBP11.22□□□□□ -0.61
TCF4-248ENST00000616053 CD1AP06126 327 aa11.22□□□□□ -0.61
TCF4-248ENST00000616053 OR9G4Q8NGQ1 327 aa11.22□□□□□ -0.61
TCF4-248ENST00000616053 NUDCD2Q8WVJ2 157 aa11.22□□□□□ -0.61
TCF4-248ENST00000616053 ZNF714Q96N38 554 aa11.22□□□□□ -0.61
TCF4-248ENST00000616053 TMEM38BQ9NVV0 291 aa11.22□□□□□ -0.61
TCF4-248ENST00000616053 A6NDN8 102 aa11.22□□□□□ -0.61
TCF4-248ENST00000616053 FBLL1A6NHQ2 334 aaKnown RBP11.22□□□□□ -0.61
TCF4-248ENST00000616053 CA13Q8N1Q1 262 aa11.22□□□□□ -0.61
TCF4-248ENST00000616053 TNFRSF18Q9Y5U5 241 aa11.22□□□□□ -0.61
TCF4-248ENST00000616053 IGHA1P01876 353 aa11.22□□□□□ -0.61
TCF4-248ENST00000616053 IGHA2P01877 340 aa11.22□□□□□ -0.61
TCF4-248ENST00000616053 IL4P05112 153 aa11.22□□□□□ -0.61
TCF4-248ENST00000616053 HIST1H1CP16403 213 aaKnown RBP11.22□□□□□ -0.61
TCF4-248ENST00000616053 CTLA4P16410 223 aa11.22□□□□□ -0.61
TCF4-248ENST00000616053 PDZK1IP1Q13113 114 aa11.22□□□□□ -0.61
TCF4-248ENST00000616053 OR2D3Q8NGH3 330 aa11.22□□□□□ -0.61
TCF4-248ENST00000616053 PP6455Q8WZ26 134 aa11.22□□□□□ -0.61
TCF4-248ENST00000616053 HGDQ93099 445 aa11.22□□□□□ -0.61
TCF4-248ENST00000616053 PIPOXQ9P0Z9 390 aa11.22□□□□□ -0.61
TCF4-248ENST00000616053 FOXH1O75593 365 aa11.21□□□□□ -0.61
TCF4-248ENST00000616053 CEACAM4O75871 244 aa11.21□□□□□ -0.61
TCF4-248ENST00000616053 OR2A4O95047 310 aa11.21□□□□□ -0.61
TCF4-248ENST00000616053 TGFAP01135 160 aa11.21□□□□□ -0.61
TCF4-248ENST00000616053 TMEM33P57088 247 aa11.21□□□□□ -0.61
TCF4-248ENST00000616053 FAM53BQ14153 422 aa11.21□□□□□ -0.61
TCF4-248ENST00000616053 PSG5Q15238 335 aa11.21□□□□□ -0.61
TCF4-248ENST00000616053 TMEM251Q8N6I4 163 aa11.21□□□□□ -0.61
TCF4-248ENST00000616053 R3HDM4Q96D70 268 aa11.21□□□□□ -0.61
TCF4-248ENST00000616053 NEURL3Q96EH8 262 aa11.21□□□□□ -0.61
TCF4-248ENST00000616053 OR2A7Q96R45 310 aa11.21□□□□□ -0.61
TCF4-248ENST00000616053 CBY1Q9Y3M2 126 aa11.21□□□□□ -0.61
TCF4-248ENST00000616053 SVILO95425 2214 aa11.21□□□□□ -0.61
TCF4-248ENST00000616053 GAPDHP04406 335 aaKnown RBP11.21□□□□□ -0.61
TCF4-248ENST00000616053 CLDN10P78369 228 aa11.21□□□□□ -0.61
TCF4-248ENST00000616053 DLK1P80370 383 aa11.21□□□□□ -0.61
TCF4-248ENST00000616053 ELOBQ15370 118 aa11.21□□□□□ -0.61
TCF4-248ENST00000616053 ZDHHC24Q6UX98 284 aa11.21□□□□□ -0.61
TCF4-248ENST00000616053 LRP11Q86VZ4 500 aa11.21□□□□□ -0.61
TCF4-248ENST00000616053 LURAP1LQ8IV03 231 aa11.21□□□□□ -0.61
TCF4-248ENST00000616053 MTCH2Q9Y6C9 303 aa11.21□□□□□ -0.61
TCF4-248ENST00000616053 WNT1P04628 370 aa11.21□□□□□ -0.61
TCF4-248ENST00000616053 MAGEA5P43359 124 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms