RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 ZNF695Q8IW36 515 aa11.47□□□□□ -0.57
MSH6-214ENST00000616033 CABLES2Q9BTV7 478 aa11.47□□□□□ -0.57
MSH6-214ENST00000616033 IGSF23A1L1A6 192 aa11.47□□□□□ -0.57
MSH6-214ENST00000616033 SHISA7A6NL88 538 aa11.47□□□□□ -0.57
MSH6-214ENST00000616033 NPIPB7O75200 414 aa11.47□□□□□ -0.57
MSH6-214ENST00000616033 TMEM11P17152 192 aa11.47□□□□□ -0.57
MSH6-214ENST00000616033 NKX2-1P43699 371 aaPredicted RBP11.47□□□□□ -0.57
MSH6-214ENST00000616033 GALNT14Q96FL9 552 aa11.47□□□□□ -0.57
MSH6-214ENST00000616033 TP53RKQ96S44 253 aa11.47□□□□□ -0.57
MSH6-214ENST00000616033 WNT5BQ9H1J7 359 aa11.47□□□□□ -0.57
MSH6-214ENST00000616033 TP53TG5Q9Y2B4 290 aa11.47□□□□□ -0.57
MSH6-214ENST00000616033 NBEAQ8NFP9 2946 aa11.47□□□□□ -0.57
MSH6-214ENST00000616033 C3orf80F5H4A9 247 aa11.47□□□□□ -0.57
MSH6-214ENST00000616033 HSD17B6O14756 317 aa11.47□□□□□ -0.57
MSH6-214ENST00000616033 OR7C1O76099 320 aaPredicted RBP11.47□□□□□ -0.57
MSH6-214ENST00000616033 IGHG1P01857 330 aa11.47□□□□□ -0.57
MSH6-214ENST00000616033 SRP19P09132 144 aaKnown RBP11.47□□□□□ -0.57
MSH6-214ENST00000616033 OR4A8P0C604 315 aa11.47□□□□□ -0.57
MSH6-214ENST00000616033 HNF1AP20823 631 aa11.47□□□□□ -0.57
MSH6-214ENST00000616033 IDH3GP51553 393 aaPredicted RBP11.47□□□□□ -0.57
MSH6-214ENST00000616033 TESK1Q15569 626 aa11.47□□□□□ -0.57
MSH6-214ENST00000616033 FAM185AQ8N0U4 392 aa11.47□□□□□ -0.57
MSH6-214ENST00000616033 TMEM171Q8WVE6 324 aa11.47□□□□□ -0.57
MSH6-214ENST00000616033 AURKAIP1Q9NWT8 199 aaPredicted RBP11.47□□□□□ -0.57
MSH6-214ENST00000616033 SELENOKQ9Y6D0 94 aa11.47□□□□□ -0.57
MSH6-214ENST00000616033 FTCDNL1E5RQL4 147 aa11.46□□□□□ -0.57
MSH6-214ENST00000616033 SIAH2O43255 324 aa11.46□□□□□ -0.57
MSH6-214ENST00000616033 TRAPPC6AO75865 159 aa11.46□□□□□ -0.57
MSH6-214ENST00000616033 CD55P08174 381 aa11.46□□□□□ -0.57
MSH6-214ENST00000616033 ELLP55199 621 aaPredicted RBP11.46□□□□□ -0.57
MSH6-214ENST00000616033 RPS16P62249 146 aaKnown RBP11.46□□□□□ -0.57
MSH6-214ENST00000616033 IGLV3-21P80748 117 aaPredicted RBP11.46□□□□□ -0.57
MSH6-214ENST00000616033 TMEM267Q0VDI3 215 aaPredicted RBP11.46□□□□□ -0.57
MSH6-214ENST00000616033 DIRC2Q96SL1 478 aa11.46□□□□□ -0.57
MSH6-214ENST00000616033 ZNF665Q9H7R5 613 aa11.46□□□□□ -0.57
MSH6-214ENST00000616033 CEBPZOSA8MTT3 80 aa11.46□□□□□ -0.58
MSH6-214ENST00000616033 HSPA12AO43301 675 aa11.46□□□□□ -0.58
MSH6-214ENST00000616033 TSPAN2O60636 221 aa11.46□□□□□ -0.58
MSH6-214ENST00000616033 CTSDP07339 412 aaPredicted RBP11.46□□□□□ -0.58
MSH6-214ENST00000616033 ZNF41P51814 821 aaPredicted RBP11.46□□□□□ -0.58
MSH6-214ENST00000616033 DEGS2Q6QHC5 323 aa11.46□□□□□ -0.58
MSH6-214ENST00000616033 Q6ZVH6 145 aa11.46□□□□□ -0.58
MSH6-214ENST00000616033 PRR18Q8N4B5 295 aa11.46□□□□□ -0.58
MSH6-214ENST00000616033 DDIT4LQ96D03 193 aa11.46□□□□□ -0.58
MSH6-214ENST00000616033 GINS3Q9BRX5 216 aa11.46□□□□□ -0.58
MSH6-214ENST00000616033 RSG1Q9BU20 258 aa11.46□□□□□ -0.58
MSH6-214ENST00000616033 METTL7AQ9H8H3 244 aa11.46□□□□□ -0.58
MSH6-214ENST00000616033 P4HTMQ9NXG6 502 aa11.46□□□□□ -0.58
MSH6-214ENST00000616033 STRAPQ9Y3F4 350 aaKnown RBP11.46□□□□□ -0.58
MSH6-214ENST00000616033 ADAM20O43506 726 aa11.45□□□□□ -0.58
MSH6-214ENST00000616033 TMEM187Q14656 261 aa11.45□□□□□ -0.58
MSH6-214ENST00000616033 SLC10A1Q14973 349 aa11.45□□□□□ -0.58
MSH6-214ENST00000616033 DOK3Q7L591 496 aa11.45□□□□□ -0.58
MSH6-214ENST00000616033 GPR137CQ8N3F9 429 aa11.45□□□□□ -0.58
MSH6-214ENST00000616033 UBALD1Q8TB05 177 aa11.45□□□□□ -0.58
MSH6-214ENST00000616033 THADAQ6YHU6 1953 aa11.45□□□□□ -0.58
MSH6-214ENST00000616033 TLCD2A6NGC4 264 aa11.45□□□□□ -0.58
MSH6-214ENST00000616033 K7N7A8 449 aa11.45□□□□□ -0.58
MSH6-214ENST00000616033 FBLP22087 321 aaKnown RBP11.45□□□□□ -0.58
MSH6-214ENST00000616033 ANKRD39Q53RE8 183 aa11.45□□□□□ -0.58
MSH6-214ENST00000616033 C1orf87Q8N0U7 546 aa11.45□□□□□ -0.58
MSH6-214ENST00000616033 FBXL14Q8N1E6 418 aa11.45□□□□□ -0.58
MSH6-214ENST00000616033 HIST1H2BLQ99880 126 aa11.45□□□□□ -0.58
MSH6-214ENST00000616033 LRRC61Q9BV99 259 aa11.45□□□□□ -0.58
MSH6-214ENST00000616033 NECAP2Q9NVZ3 263 aa11.45□□□□□ -0.58
MSH6-214ENST00000616033 TUBD1Q9UJT1 453 aa11.45□□□□□ -0.58
MSH6-214ENST00000616033 FOXD3Q9UJU5 478 aaPredicted RBP11.45□□□□□ -0.58
MSH6-214ENST00000616033 LAMP3Q9UQV4 416 aa11.45□□□□□ -0.58
MSH6-214ENST00000616033 LTBP2Q14767 1821 aa11.45□□□□□ -0.58
MSH6-214ENST00000616033 IGKV3-11P04433 115 aa11.45□□□□□ -0.58
MSH6-214ENST00000616033 ZNF16P17020 682 aaPredicted RBP11.45□□□□□ -0.58
MSH6-214ENST00000616033 COMMD1Q8N668 190 aa11.45□□□□□ -0.58
MSH6-214ENST00000616033 RPUSD4Q96CM3 377 aaKnown RBP11.45□□□□□ -0.58
MSH6-214ENST00000616033 LYZL4Q96KX0 146 aa11.45□□□□□ -0.58
MSH6-214ENST00000616033 A8MWP6 167 aa11.44□□□□□ -0.58
MSH6-214ENST00000616033 EFNA2O43921 213 aa11.44□□□□□ -0.58
MSH6-214ENST00000616033 SELEP16581 610 aa11.44□□□□□ -0.58
MSH6-214ENST00000616033 AADACP22760 399 aa11.44□□□□□ -0.58
MSH6-214ENST00000616033 TSPAN7P41732 249 aa11.44□□□□□ -0.58
MSH6-214ENST00000616033 HLA-DRB3P79483 266 aa11.44□□□□□ -0.58
MSH6-214ENST00000616033 ICAM4Q14773 271 aa11.44□□□□□ -0.58
MSH6-214ENST00000616033 LIAT1Q6ZQX7 453 aa11.44□□□□□ -0.58
MSH6-214ENST00000616033 LYPD6BQ8NI32 183 aa11.44□□□□□ -0.58
MSH6-214ENST00000616033 NDUFAF3Q9BU61 184 aa11.44□□□□□ -0.58
MSH6-214ENST00000616033 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.44□□□□□ -0.58
MSH6-214ENST00000616033 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.44□□□□□ -0.58
MSH6-214ENST00000616033 A0A1W2PPQ1 181 aa11.44□□□□□ -0.58
MSH6-214ENST00000616033 SERPINE3A8MV23 424 aa11.44□□□□□ -0.58
MSH6-214ENST00000616033 M0R143 59 aa11.44□□□□□ -0.58
MSH6-214ENST00000616033 PTBP3O95758 552 aaKnown RBP11.44□□□□□ -0.58
MSH6-214ENST00000616033 FGF7P21781 194 aa11.44□□□□□ -0.58
MSH6-214ENST00000616033 CCNOP22674 350 aa11.44□□□□□ -0.58
MSH6-214ENST00000616033 FOXO1Q12778 655 aa11.44□□□□□ -0.58
MSH6-214ENST00000616033 HIKESHIQ53FT3 197 aa11.44□□□□□ -0.58
MSH6-214ENST00000616033 SPSB3Q6PJ21 355 aa11.44□□□□□ -0.58
MSH6-214ENST00000616033 KLHDC7BQ96G42 594 aa11.44□□□□□ -0.58
MSH6-214ENST00000616033 OR51B6Q9H340 312 aa11.44□□□□□ -0.58
MSH6-214ENST00000616033 HEATR1Q9H583 2144 aaKnown RBP11.44□□□□□ -0.58
MSH6-214ENST00000616033 TRAV34A0A0B4J273 112 aa11.44□□□□□ -0.58
MSH6-214ENST00000616033 TNFRSF10CO14798 259 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms