RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 SRSF2Q01130 221 aaKnown RBP9.58□□□□□ -0.88
SLIRP-212ENST00000613856 IKZF1Q13422 519 aa9.58□□□□□ -0.88
SLIRP-212ENST00000613856 BAK1Q16611 211 aa9.58□□□□□ -0.88
SLIRP-212ENST00000613856 CDNFQ49AH0 187 aa9.58□□□□□ -0.88
SLIRP-212ENST00000613856 TEX36Q5VZQ5 186 aa9.58□□□□□ -0.88
SLIRP-212ENST00000613856 TRIQKQ629K1 86 aa9.58□□□□□ -0.88
SLIRP-212ENST00000613856 Q6P435 159 aa9.58□□□□□ -0.88
SLIRP-212ENST00000613856 C16orf87Q6PH81 154 aa9.58□□□□□ -0.88
SLIRP-212ENST00000613856 PRSS57Q6UWY2 283 aa9.58□□□□□ -0.88
SLIRP-212ENST00000613856 GPX8Q8TED1 209 aa9.58□□□□□ -0.88
SLIRP-212ENST00000613856 YIPF5Q969M3 257 aa9.58□□□□□ -0.88
SLIRP-212ENST00000613856 CACNG6Q9BXT2 260 aa9.58□□□□□ -0.88
SLIRP-212ENST00000613856 WDR13Q9H1Z4 485 aa9.58□□□□□ -0.88
SLIRP-212ENST00000613856 TMEM106BQ9NUM4 274 aa9.58□□□□□ -0.88
SLIRP-212ENST00000613856 PLEKHJ1Q9NW61 149 aa9.58□□□□□ -0.88
SLIRP-212ENST00000613856 NLKQ9UBE8 527 aa9.58□□□□□ -0.88
SLIRP-212ENST00000613856 GLS2Q9UI32 602 aa9.58□□□□□ -0.88
SLIRP-212ENST00000613856 LAMP3Q9UQV4 416 aa9.58□□□□□ -0.88
SLIRP-212ENST00000613856 KCNK7Q9Y2U2 307 aa9.58□□□□□ -0.88
SLIRP-212ENST00000613856 ISPDA4D126 451 aa9.57□□□□□ -0.88
SLIRP-212ENST00000613856 TMEM178BH3BS89 294 aa9.57□□□□□ -0.88
SLIRP-212ENST00000613856 SH2D1BO14796 132 aa9.57□□□□□ -0.88
SLIRP-212ENST00000613856 FSTL3O95633 263 aa9.57□□□□□ -0.88
SLIRP-212ENST00000613856 HAND1O96004 215 aa9.57□□□□□ -0.88
SLIRP-212ENST00000613856 HPXP02790 462 aa9.57□□□□□ -0.88
SLIRP-212ENST00000613856 PTHLHP12272 177 aa9.57□□□□□ -0.88
SLIRP-212ENST00000613856 MUC1P15941 1255 aaPredicted RBP9.57□□□□□ -0.88
SLIRP-212ENST00000613856 LMO1P25800 156 aa9.57□□□□□ -0.88
SLIRP-212ENST00000613856 SNU13P55769 128 aaKnown RBP9.57□□□□□ -0.88
SLIRP-212ENST00000613856 IFITM3Q01628 133 aa9.57□□□□□ -0.88
SLIRP-212ENST00000613856 NKAPLQ5M9Q1 402 aa9.57□□□□□ -0.88
SLIRP-212ENST00000613856 C6orf201Q7Z4U5 140 aa9.57□□□□□ -0.88
SLIRP-212ENST00000613856 RTN4RL2Q86UN3 420 aa9.57□□□□□ -0.88
SLIRP-212ENST00000613856 LYSMD2Q8IV50 215 aa9.57□□□□□ -0.88
SLIRP-212ENST00000613856 OR8H2Q8N162 312 aa9.57□□□□□ -0.88
SLIRP-212ENST00000613856 OR52I2Q8NH67 350 aa9.57□□□□□ -0.88
SLIRP-212ENST00000613856 FCAMRQ8WWV6 532 aa9.57□□□□□ -0.88
SLIRP-212ENST00000613856 GCDHQ92947 438 aaPredicted RBP9.57□□□□□ -0.88
SLIRP-212ENST00000613856 SEH1LQ96EE3 360 aa9.57□□□□□ -0.88
SLIRP-212ENST00000613856 VRK1Q99986 396 aaPredicted RBP9.57□□□□□ -0.88
SLIRP-212ENST00000613856 THAP7Q9BT49 309 aaPredicted RBP9.57□□□□□ -0.88
SLIRP-212ENST00000613856 ABCB10Q9NRK6 738 aa9.57□□□□□ -0.88
SLIRP-212ENST00000613856 ZNF581Q9P0T4 197 aa9.57□□□□□ -0.88
SLIRP-212ENST00000613856 DNAJB11Q9UBS4 358 aa9.57□□□□□ -0.88
SLIRP-212ENST00000613856 MTFP1Q9UDX5 166 aa9.57□□□□□ -0.88
SLIRP-212ENST00000613856 ZNF107Q9UII5 783 aaPredicted RBP9.57□□□□□ -0.88
SLIRP-212ENST00000613856 ZNF222Q9UK12 451 aa9.57□□□□□ -0.88
SLIRP-212ENST00000613856 ANAPC10Q9UM13 185 aa9.57□□□□□ -0.88
SLIRP-212ENST00000613856 WIPI2Q9Y4P8 454 aa9.57□□□□□ -0.88
SLIRP-212ENST00000613856 TRAV24A0A0B4J272 114 aa9.56□□□□□ -0.88
SLIRP-212ENST00000613856 A0A1W2PQ09 198 aa9.56□□□□□ -0.88
SLIRP-212ENST00000613856 MEIOCA2RUB1 952 aa9.56□□□□□ -0.88
SLIRP-212ENST00000613856 OOEPA6NGQ2 149 aa9.56□□□□□ -0.88
SLIRP-212ENST00000613856 OVOL3O00110 214 aa9.56□□□□□ -0.88
SLIRP-212ENST00000613856 LGALS8O00214 317 aa9.56□□□□□ -0.88
SLIRP-212ENST00000613856 SLC33A1O00400 549 aaPredicted RBP9.56□□□□□ -0.88
SLIRP-212ENST00000613856 DEGS1O15121 323 aa9.56□□□□□ -0.88
SLIRP-212ENST00000613856 OR2H2O95918 312 aa9.56□□□□□ -0.88
SLIRP-212ENST00000613856 CYB5R3P00387 301 aaPredicted RBP9.56□□□□□ -0.88
SLIRP-212ENST00000613856 ZNF44P15621 663 aa9.56□□□□□ -0.88
SLIRP-212ENST00000613856 DUSP1P28562 367 aa9.56□□□□□ -0.88
SLIRP-212ENST00000613856 CD80P33681 288 aa9.56□□□□□ -0.88
SLIRP-212ENST00000613856 GDNFP39905 211 aa9.56□□□□□ -0.88
SLIRP-212ENST00000613856 MDH2P40926 338 aaKnown RBP9.56□□□□□ -0.88
SLIRP-212ENST00000613856 CBX5P45973 191 aa9.56□□□□□ -0.88
SLIRP-212ENST00000613856 KCNJ3P48549 501 aa9.56□□□□□ -0.88
SLIRP-212ENST00000613856 GNG2P59768 71 aa9.56□□□□□ -0.88
SLIRP-212ENST00000613856 ACTBP60709 375 aa9.56□□□□□ -0.88
SLIRP-212ENST00000613856 ACTG1P63261 375 aa9.56□□□□□ -0.88
SLIRP-212ENST00000613856 GUCA2AQ02747 115 aa9.56□□□□□ -0.88
SLIRP-212ENST00000613856 SCN1BQ07699 218 aa9.56□□□□□ -0.88
SLIRP-212ENST00000613856 STEAP3Q658P3 488 aa9.56□□□□□ -0.88
SLIRP-212ENST00000613856 OLFML2AQ68BL7 652 aa9.56□□□□□ -0.88
SLIRP-212ENST00000613856 STUMQ69YW2 141 aa9.56□□□□□ -0.88
SLIRP-212ENST00000613856 NUDCD2Q8WVJ2 157 aa9.56□□□□□ -0.88
SLIRP-212ENST00000613856 DEDD2Q8WXF8 326 aa9.56□□□□□ -0.88
SLIRP-212ENST00000613856 SULT4A1Q9BR01 284 aa9.56□□□□□ -0.88
SLIRP-212ENST00000613856 ZMAT3Q9HA38 289 aaKnown RBP9.56□□□□□ -0.88
SLIRP-212ENST00000613856 CACNG2Q9Y698 323 aa9.56□□□□□ -0.88
SLIRP-212ENST00000613856 IGKV1D-17A0A075B6S4 117 aa9.55□□□□□ -0.88
SLIRP-212ENST00000613856 RFPL4AA6NLU0 287 aa9.55□□□□□ -0.88
SLIRP-212ENST00000613856 OR2AT4A6NND4 320 aa9.55□□□□□ -0.88
SLIRP-212ENST00000613856 POM121CA8CG34 1229 aa9.55□□□□□ -0.88
SLIRP-212ENST00000613856 MCRIP1C9JLW8 97 aa9.55□□□□□ -0.88
SLIRP-212ENST00000613856 RNF223E7ERA6 249 aa9.55□□□□□ -0.88
SLIRP-212ENST00000613856 C3orf80F5H4A9 247 aa9.55□□□□□ -0.88
SLIRP-212ENST00000613856 RFPL4AL1F8VTS6 287 aa9.55□□□□□ -0.88
SLIRP-212ENST00000613856 WIPF1O43516 503 aa9.55□□□□□ -0.88
SLIRP-212ENST00000613856 LANCL1O43813 399 aa9.55□□□□□ -0.88
SLIRP-212ENST00000613856 SSX5O60225 188 aa9.55□□□□□ -0.88
SLIRP-212ENST00000613856 RP2O75695 350 aa9.55□□□□□ -0.88
SLIRP-212ENST00000613856 CD3GP09693 182 aa9.55□□□□□ -0.88
SLIRP-212ENST00000613856 PSG2P11465 335 aa9.55□□□□□ -0.88
SLIRP-212ENST00000613856 DTYMKP23919 212 aa9.55□□□□□ -0.88
SLIRP-212ENST00000613856 RCVRNP35243 200 aa9.55□□□□□ -0.88
SLIRP-212ENST00000613856 GMFBP60983 142 aa9.55□□□□□ -0.88
SLIRP-212ENST00000613856 HOXA4Q00056 320 aaPredicted RBP9.55□□□□□ -0.88
SLIRP-212ENST00000613856 PAX5Q02548 391 aa9.55□□□□□ -0.88
SLIRP-212ENST00000613856 ARFRP1Q13795 201 aa9.55□□□□□ -0.88
SLIRP-212ENST00000613856 RBM39Q14498 530 aaKnown RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms