RNA–Protein interactions for RNA: ENST00000612828.4

CNTNAP3B-211, Transcript of contactin associated protein like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNTNAP3B, Length 7,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-211ENST00000612828 OR2V1Q8NHB1 315 aa9.68□□□□□ -0.86
CNTNAP3B-211ENST00000612828 ZNF768Q9H5H4 540 aaKnown RBP9.68□□□□□ -0.86
CNTNAP3B-211ENST00000612828 SPTBN1Q01082 2364 aaKnown RBP9.68□□□□□ -0.86
CNTNAP3B-211ENST00000612828 A0A0J9YY10 115 aa9.68□□□□□ -0.86
CNTNAP3B-211ENST00000612828 ZNF354AO60765 605 aaPredicted RBP9.68□□□□□ -0.86
CNTNAP3B-211ENST00000612828 COX5AP20674 150 aa9.68□□□□□ -0.86
CNTNAP3B-211ENST00000612828 C10orf128Q5T292 105 aa9.68□□□□□ -0.86
CNTNAP3B-211ENST00000612828 HOGA1Q86XE5 327 aa9.68□□□□□ -0.86
CNTNAP3B-211ENST00000612828 SCGB3A1Q96QR1 104 aa9.68□□□□□ -0.86
CNTNAP3B-211ENST00000612828 ACER3Q9NUN7 267 aa9.68□□□□□ -0.86
CNTNAP3B-211ENST00000612828 IGHV3-66A0A0C4DH42 116 aa9.68□□□□□ -0.86
CNTNAP3B-211ENST00000612828 SMPD2O60906 423 aa9.68□□□□□ -0.86
CNTNAP3B-211ENST00000612828 PRSS48Q7RTY5 328 aa9.68□□□□□ -0.86
CNTNAP3B-211ENST00000612828 SEC22CQ9BRL7 303 aa9.68□□□□□ -0.86
CNTNAP3B-211ENST00000612828 PEX7O00628 323 aa9.68□□□□□ -0.86
CNTNAP3B-211ENST00000612828 FFAR1O14842 300 aa9.68□□□□□ -0.86
CNTNAP3B-211ENST00000612828 PI3P19957 117 aa9.68□□□□□ -0.86
CNTNAP3B-211ENST00000612828 CD70P32970 193 aa9.68□□□□□ -0.86
CNTNAP3B-211ENST00000612828 SH2D5Q6ZV89 423 aa9.68□□□□□ -0.86
CNTNAP3B-211ENST00000612828 ZNF784Q8NCA9 323 aaPredicted RBP9.68□□□□□ -0.86
CNTNAP3B-211ENST00000612828 OR1L6Q8NGR2 347 aa9.68□□□□□ -0.86
CNTNAP3B-211ENST00000612828 TMEM174Q8WUU8 243 aa9.68□□□□□ -0.86
CNTNAP3B-211ENST00000612828 SPOCK3Q9BQ16 436 aa9.68□□□□□ -0.86
CNTNAP3B-211ENST00000612828 INSL5Q9Y5Q6 135 aa9.68□□□□□ -0.86
CNTNAP3B-211ENST00000612828 SNURFLB1AK76 121 aa9.68□□□□□ -0.86
CNTNAP3B-211ENST00000612828 TRMT12Q53H54 448 aaKnown RBP9.68□□□□□ -0.86
CNTNAP3B-211ENST00000612828 ZNF2Q9BSG1 426 aaPredicted RBP9.68□□□□□ -0.86
CNTNAP3B-211ENST00000612828 DUXBA0A1W2PPF3 345 aa9.68□□□□□ -0.86
CNTNAP3B-211ENST00000612828 hADV38S2A0JD32 116 aa9.68□□□□□ -0.86
CNTNAP3B-211ENST00000612828 NPIPB15A6NHN6 443 aaPredicted RBP9.68□□□□□ -0.86
CNTNAP3B-211ENST00000612828 M0R143 59 aa9.68□□□□□ -0.86
CNTNAP3B-211ENST00000612828 ZNF737O75373 536 aa9.68□□□□□ -0.86
CNTNAP3B-211ENST00000612828 PLA2G2AP14555 144 aa9.68□□□□□ -0.86
CNTNAP3B-211ENST00000612828 CRYBB2P43320 205 aa9.68□□□□□ -0.86
CNTNAP3B-211ENST00000612828 C17orf67Q0P5P2 114 aa9.68□□□□□ -0.86
CNTNAP3B-211ENST00000612828 RIGQ13278 110 aa9.68□□□□□ -0.86
CNTNAP3B-211ENST00000612828 Q6ZSR9 355 aa9.68□□□□□ -0.86
CNTNAP3B-211ENST00000612828 PRSS45Q7RTY3 260 aa9.68□□□□□ -0.86
CNTNAP3B-211ENST00000612828 TMPRSS13Q9BYE2 586 aa9.68□□□□□ -0.86
CNTNAP3B-211ENST00000612828 TSPAN2O60636 221 aa9.67□□□□□ -0.86
CNTNAP3B-211ENST00000612828 RING1Q06587 406 aa9.67□□□□□ -0.86
CNTNAP3B-211ENST00000612828 SLC16A12Q6ZSM3 486 aa9.67□□□□□ -0.86
CNTNAP3B-211ENST00000612828 ZNF480Q8WV37 535 aa9.67□□□□□ -0.86
CNTNAP3B-211ENST00000612828 TMEM126AQ9H061 195 aa9.67□□□□□ -0.86
CNTNAP3B-211ENST00000612828 SLA2Q9H6Q3 261 aa9.67□□□□□ -0.86
CNTNAP3B-211ENST00000612828 PKDREJQ9NTG1 2253 aa9.67□□□□□ -0.86
CNTNAP3B-211ENST00000612828 hADV29S1A0JD25 119 aa9.67□□□□□ -0.86
CNTNAP3B-211ENST00000612828 TCRAP04437 139 aa9.67□□□□□ -0.86
CNTNAP3B-211ENST00000612828 RGNQ15493 299 aa9.67□□□□□ -0.86
CNTNAP3B-211ENST00000612828 C2orf83Q53S99 150 aa9.67□□□□□ -0.86
CNTNAP3B-211ENST00000612828 MOGAT3Q86VF5 341 aa9.67□□□□□ -0.86
CNTNAP3B-211ENST00000612828 TMEM19Q96HH6 336 aa9.67□□□□□ -0.86
CNTNAP3B-211ENST00000612828 TOPAZ1Q8N9V7 1692 aa9.67□□□□□ -0.86
CNTNAP3B-211ENST00000612828 Q6ZNX1 250 aa9.67□□□□□ -0.86
CNTNAP3B-211ENST00000612828 DUX3Q96PT4 197 aa9.67□□□□□ -0.86
CNTNAP3B-211ENST00000612828 TMEM204Q9BSN7 226 aa9.67□□□□□ -0.86
CNTNAP3B-211ENST00000612828 VN1R1Q9GZP7 353 aa9.67□□□□□ -0.86
CNTNAP3B-211ENST00000612828 MMP26Q9NRE1 261 aa9.67□□□□□ -0.86
CNTNAP3B-211ENST00000612828 CBLCQ9ULV8 474 aa9.67□□□□□ -0.86
CNTNAP3B-211ENST00000612828 ZNF30P17039 623 aa9.67□□□□□ -0.86
CNTNAP3B-211ENST00000612828 ALOX5APP20292 161 aa9.67□□□□□ -0.86
CNTNAP3B-211ENST00000612828 ADRA1AP35348 466 aa9.67□□□□□ -0.86
CNTNAP3B-211ENST00000612828 CEACAM6P40199 344 aa9.67□□□□□ -0.86
CNTNAP3B-211ENST00000612828 CLDN20P56880 219 aa9.67□□□□□ -0.86
CNTNAP3B-211ENST00000612828 RUNX3Q13761 415 aa9.67□□□□□ -0.86
CNTNAP3B-211ENST00000612828 ZNF680Q8NEM1 530 aa9.67□□□□□ -0.86
CNTNAP3B-211ENST00000612828 OR5AP2Q8NGF4 316 aa9.67□□□□□ -0.86
CNTNAP3B-211ENST00000612828 RFESDQ8TAC1 157 aa9.67□□□□□ -0.86
CNTNAP3B-211ENST00000612828 WDR54Q9H977 334 aa9.67□□□□□ -0.86
CNTNAP3B-211ENST00000612828 LYRM2Q9NU23 88 aaPredicted RBP9.67□□□□□ -0.86
CNTNAP3B-211ENST00000612828 TMEM106BQ9NUM4 274 aa9.67□□□□□ -0.86
CNTNAP3B-211ENST00000612828 MN1Q10571 1320 aaPredicted RBP9.67□□□□□ -0.86
CNTNAP3B-211ENST00000612828 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.67□□□□□ -0.86
CNTNAP3B-211ENST00000612828 C7orf77A4D0Y5 90 aa9.67□□□□□ -0.86
CNTNAP3B-211ENST00000612828 CTSVO60911 334 aa9.67□□□□□ -0.86
CNTNAP3B-211ENST00000612828 MT-ATP6P00846 226 aa9.67□□□□□ -0.86
CNTNAP3B-211ENST00000612828 MFAP2P55001 183 aa9.67□□□□□ -0.86
CNTNAP3B-211ENST00000612828 SNRPNP63162 240 aaKnown RBP9.67□□□□□ -0.86
CNTNAP3B-211ENST00000612828 HBBP68871 147 aa9.67□□□□□ -0.86
CNTNAP3B-211ENST00000612828 ZNF774Q6NX45 483 aa9.67□□□□□ -0.86
CNTNAP3B-211ENST00000612828 PCSK4Q6UW60 755 aa9.67□□□□□ -0.86
CNTNAP3B-211ENST00000612828 SLC39A11Q8N1S5 342 aa9.67□□□□□ -0.86
CNTNAP3B-211ENST00000612828 VN1R17PQ8TDU5 208 aa9.67□□□□□ -0.86
CNTNAP3B-211ENST00000612828 NAT6Q93015 286 aa9.67□□□□□ -0.86
CNTNAP3B-211ENST00000612828 CCDC88AQ3V6T2 1871 aa9.67□□□□□ -0.86
CNTNAP3B-211ENST00000612828 TMEM272A0A1B0GTI8 110 aa9.67□□□□□ -0.86
CNTNAP3B-211ENST00000612828 ZNF623O75123 536 aa9.67□□□□□ -0.86
CNTNAP3B-211ENST00000612828 OR4A5Q8NH83 315 aa9.67□□□□□ -0.86
CNTNAP3B-211ENST00000612828 MS4A4EQ96PG1 132 aa9.67□□□□□ -0.86
CNTNAP3B-211ENST00000612828 CENPOQ9BU64 300 aa9.67□□□□□ -0.86
CNTNAP3B-211ENST00000612828 UQCC1Q9NVA1 299 aa9.67□□□□□ -0.86
CNTNAP3B-211ENST00000612828 AURKAIP1Q9NWT8 199 aaPredicted RBP9.67□□□□□ -0.86
CNTNAP3B-211ENST00000612828 TIAM2Q8IVF5 1701 aa9.66□□□□□ -0.86
CNTNAP3B-211ENST00000612828 LOC390937A0A1W2PQ73 354 aa9.66□□□□□ -0.86
CNTNAP3B-211ENST00000612828 M0R082 166 aa9.66□□□□□ -0.86
CNTNAP3B-211ENST00000612828 CST7O76096 145 aa9.66□□□□□ -0.86
CNTNAP3B-211ENST00000612828 HIST1H1TP22492 207 aaPredicted RBP9.66□□□□□ -0.86
CNTNAP3B-211ENST00000612828 PRDX2P32119 198 aa9.66□□□□□ -0.86
CNTNAP3B-211ENST00000612828 DCTDP32321 178 aa9.66□□□□□ -0.86
CNTNAP3B-211ENST00000612828 CEACAM3P40198 252 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms