RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 ANXA7P20073 488 aaKnown RBP7.54□□□□□ -1.2
CCDC47-207ENST00000612558 DUSP1P28562 367 aa7.54□□□□□ -1.2
CCDC47-207ENST00000612558 TSPAN5P62079 268 aa7.54□□□□□ -1.2
CCDC47-207ENST00000612558 SORDQ00796 357 aa7.54□□□□□ -1.2
CCDC47-207ENST00000612558 CBX3Q13185 183 aa7.54□□□□□ -1.2
CCDC47-207ENST00000612558 RBM39Q14498 530 aaKnown RBP7.54□□□□□ -1.2
CCDC47-207ENST00000612558 ZNF146Q15072 292 aa7.54□□□□□ -1.2
CCDC47-207ENST00000612558 MPPED2Q15777 294 aa7.54□□□□□ -1.2
CCDC47-207ENST00000612558 GRK1Q15835 563 aa7.54□□□□□ -1.2
CCDC47-207ENST00000612558 SRSF7Q16629 238 aaKnown RBP eCLIP7.54□□□□□ -1.2
CCDC47-207ENST00000612558 SPIN3Q5JUX0 258 aa7.54□□□□□ -1.2
CCDC47-207ENST00000612558 NCMAPQ5T1S8 102 aa7.54□□□□□ -1.2
CCDC47-207ENST00000612558 PRAMEF6Q5VXH4 476 aa7.54□□□□□ -1.2
CCDC47-207ENST00000612558 FIP1L1Q6UN15 594 aaKnown RBP7.54□□□□□ -1.2
CCDC47-207ENST00000612558 WDR82Q6UXN9 313 aa7.54□□□□□ -1.2
CCDC47-207ENST00000612558 GLDNQ6ZMI3 551 aaPredicted RBP7.54□□□□□ -1.2
CCDC47-207ENST00000612558 OVCH2Q7RTZ1 564 aa7.54□□□□□ -1.2
CCDC47-207ENST00000612558 TMEM17Q86X19 198 aa7.54□□□□□ -1.2
CCDC47-207ENST00000612558 OR13C8Q8NGS7 320 aa7.54□□□□□ -1.2
CCDC47-207ENST00000612558 OR6F1Q8NGZ6 308 aa7.54□□□□□ -1.2
CCDC47-207ENST00000612558 TERB2Q8NHR7 220 aa7.54□□□□□ -1.2
CCDC47-207ENST00000612558 MAFIPQ8WZ33 124 aa7.54□□□□□ -1.2
CCDC47-207ENST00000612558 GTF3AQ92664 365 aaKnown RBP7.54□□□□□ -1.2
CCDC47-207ENST00000612558 ELMOD3Q96FG2 381 aa7.54□□□□□ -1.2
CCDC47-207ENST00000612558 BEX2Q9BXY8 128 aa7.54□□□□□ -1.2
CCDC47-207ENST00000612558 MED28Q9H204 178 aa7.54□□□□□ -1.2
CCDC47-207ENST00000612558 BEX1Q9HBH7 125 aa7.54□□□□□ -1.2
CCDC47-207ENST00000612558 HES4Q9HCC6 221 aa7.54□□□□□ -1.2
CCDC47-207ENST00000612558 GPN1Q9HCN4 374 aaPredicted RBP7.54□□□□□ -1.2
CCDC47-207ENST00000612558 KCNJ16Q9NPI9 418 aa7.54□□□□□ -1.2
CCDC47-207ENST00000612558 ZDHHC8Q9ULC8 765 aa7.54□□□□□ -1.2
CCDC47-207ENST00000612558 ATP23Q9Y6H3 246 aa7.54□□□□□ -1.2
CCDC47-207ENST00000612558 IGKV1D-8A0A087WSZ0 117 aa7.53□□□□□ -1.2
CCDC47-207ENST00000612558 TMEM82A0PJX8 343 aa7.53□□□□□ -1.2
CCDC47-207ENST00000612558 NKX2-6A6NCS4 301 aa7.53□□□□□ -1.2
CCDC47-207ENST00000612558 ZSCAN5BA6NJL1 495 aa7.53□□□□□ -1.2
CCDC47-207ENST00000612558 SNRPGP15A8MWD9 76 aa7.53□□□□□ -1.2
CCDC47-207ENST00000612558 BOLA2-SMG1P6H3BVE0 249 aa7.53□□□□□ -1.2
CCDC47-207ENST00000612558 HS3ST1O14792 307 aa7.53□□□□□ -1.2
CCDC47-207ENST00000612558 SH2D1BO14796 132 aa7.53□□□□□ -1.2
CCDC47-207ENST00000612558 HPXP02790 462 aa7.53□□□□□ -1.2
CCDC47-207ENST00000612558 CFHR2P36980 270 aa7.53□□□□□ -1.2
CCDC47-207ENST00000612558 ARPC4P59998 168 aa7.53□□□□□ -1.2
CCDC47-207ENST00000612558 CDK10Q15131 360 aa7.53□□□□□ -1.2
CCDC47-207ENST00000612558 ST3GAL2Q16842 350 aa7.53□□□□□ -1.2
CCDC47-207ENST00000612558 CD276Q5ZPR3 534 aa7.53□□□□□ -1.2
CCDC47-207ENST00000612558 Q6P435 159 aa7.53□□□□□ -1.2
CCDC47-207ENST00000612558 Q6ZS46 218 aa7.53□□□□□ -1.2
CCDC47-207ENST00000612558 ZNF826PQ6ZT77 177 aa7.53□□□□□ -1.2
CCDC47-207ENST00000612558 SLC36A1Q7Z2H8 476 aa7.53□□□□□ -1.2
CCDC47-207ENST00000612558 ZDHHC22Q8N966 263 aa7.53□□□□□ -1.2
CCDC47-207ENST00000612558 SUMF2Q8NBJ7 301 aa7.53□□□□□ -1.2
CCDC47-207ENST00000612558 CCDC107Q8WV48 283 aa7.53□□□□□ -1.2
CCDC47-207ENST00000612558 DYRK2Q92630 601 aa7.53□□□□□ -1.2
CCDC47-207ENST00000612558 DACT3Q96B18 629 aaPredicted RBP7.53□□□□□ -1.2
CCDC47-207ENST00000612558 ST6GAL2Q96JF0 529 aa7.53□□□□□ -1.2
CCDC47-207ENST00000612558 DPCDQ9BVM2 203 aaPredicted RBP7.53□□□□□ -1.2
CCDC47-207ENST00000612558 PPA2Q9H2U2 334 aa7.53□□□□□ -1.2
CCDC47-207ENST00000612558 RIMS4Q9H426 269 aaPredicted RBP7.53□□□□□ -1.2
CCDC47-207ENST00000612558 ZNF286AQ9HBT8 521 aa7.53□□□□□ -1.2
CCDC47-207ENST00000612558 MYOZ1Q9NP98 299 aaPredicted RBP7.53□□□□□ -1.2
CCDC47-207ENST00000612558 UFSP2Q9NUQ7 469 aa7.53□□□□□ -1.2
CCDC47-207ENST00000612558 C1orf123Q9NWV4 160 aa7.53□□□□□ -1.2
CCDC47-207ENST00000612558 EHFQ9NZC4 300 aa7.53□□□□□ -1.2
CCDC47-207ENST00000612558 GLS2Q9UI32 602 aa7.53□□□□□ -1.2
CCDC47-207ENST00000612558 ANXA10Q9UJ72 324 aa7.53□□□□□ -1.2
CCDC47-207ENST00000612558 CHD3Q12873 2000 aaKnown RBP7.53□□□□□ -1.2
CCDC47-207ENST00000612558 SPTBN1Q01082 2364 aaKnown RBP7.53□□□□□ -1.2
CCDC47-207ENST00000612558 ANKHD1Q8IWZ3 2542 aaKnown RBP7.53□□□□□ -1.2
CCDC47-207ENST00000612558 TRAV24A0A0B4J272 114 aa7.52□□□□□ -1.21
CCDC47-207ENST00000612558 hCG_1807616A0A1W2PRN6 198 aa7.52□□□□□ -1.21
CCDC47-207ENST00000612558 FAM221AA4D161 298 aa7.52□□□□□ -1.21
CCDC47-207ENST00000612558 POM121CA8CG34 1229 aa7.52□□□□□ -1.21
CCDC47-207ENST00000612558 SPRY3O43610 288 aa7.52□□□□□ -1.21
CCDC47-207ENST00000612558 CREBL2O60519 120 aaPredicted RBP7.52□□□□□ -1.21
CCDC47-207ENST00000612558 NAPSAO96009 420 aa7.52□□□□□ -1.21
CCDC47-207ENST00000612558 OR4A8P0C604 315 aa7.52□□□□□ -1.21
CCDC47-207ENST00000612558 ZNF44P15621 663 aa7.52□□□□□ -1.21
CCDC47-207ENST00000612558 GLRA1P23415 457 aa7.52□□□□□ -1.21
CCDC47-207ENST00000612558 TNFSF4P23510 183 aa7.52□□□□□ -1.21
CCDC47-207ENST00000612558 ZNF81P51508 661 aa7.52□□□□□ -1.21
CCDC47-207ENST00000612558 ADIPOQQ15848 244 aa7.52□□□□□ -1.21
CCDC47-207ENST00000612558 ATPAF1Q5TC12 328 aaPredicted RBP7.52□□□□□ -1.21
CCDC47-207ENST00000612558 Q6ZS49 121 aa7.52□□□□□ -1.21
CCDC47-207ENST00000612558 GALNT11Q8NCW6 608 aa7.52□□□□□ -1.21
CCDC47-207ENST00000612558 OR10Z1Q8NGY1 313 aa7.52□□□□□ -1.21
CCDC47-207ENST00000612558 LINC01560Q8TB33 94 aa7.52□□□□□ -1.21
CCDC47-207ENST00000612558 NEK7Q8TDX7 302 aa7.52□□□□□ -1.21
CCDC47-207ENST00000612558 RDH5Q92781 318 aa7.52□□□□□ -1.21
CCDC47-207ENST00000612558 PLPPR2Q96GM1 343 aa7.52□□□□□ -1.21
CCDC47-207ENST00000612558 SCGB3A2Q96PL1 93 aa7.52□□□□□ -1.21
CCDC47-207ENST00000612558 OR2V2Q96R30 315 aa7.52□□□□□ -1.21
CCDC47-207ENST00000612558 FN3KRPQ9HA64 309 aa7.52□□□□□ -1.21
CCDC47-207ENST00000612558 CHMP1AQ9HD42 196 aaPredicted RBP7.52□□□□□ -1.21
CCDC47-207ENST00000612558 NECAP2Q9NVZ3 263 aa7.52□□□□□ -1.21
CCDC47-207ENST00000612558 ING3Q9NXR8 418 aa7.52□□□□□ -1.21
CCDC47-207ENST00000612558 ETAA1Q9NY74 926 aa7.52□□□□□ -1.21
CCDC47-207ENST00000612558 RASL12Q9NYN1 266 aa7.52□□□□□ -1.21
CCDC47-207ENST00000612558 IL19Q9UHD0 177 aa7.52□□□□□ -1.21
CCDC47-207ENST00000612558 ZNF221Q9UK13 617 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms