RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 PRB3Q04118 309 aaPredicted RBP10.07□□□□□ -0.8
CBWD3-208ENST00000612050 AANATQ16613 207 aa10.07□□□□□ -0.8
CBWD3-208ENST00000612050 LRRC75BQ2VPJ9 315 aa10.07□□□□□ -0.8
CBWD3-208ENST00000612050 C6orf141Q5SZD1 244 aa10.07□□□□□ -0.8
CBWD3-208ENST00000612050 XAF1Q6GPH4 301 aa10.07□□□□□ -0.8
CBWD3-208ENST00000612050 ELP2Q6IA86 826 aa10.07□□□□□ -0.8
CBWD3-208ENST00000612050 LINC00596Q86U02 117 aa10.07□□□□□ -0.8
CBWD3-208ENST00000612050 JAGN1Q8N5M9 183 aa10.07□□□□□ -0.8
CBWD3-208ENST00000612050 MS4A15Q8N5U1 240 aa10.07□□□□□ -0.8
CBWD3-208ENST00000612050 ZFP41Q8N8Y5 198 aa10.07□□□□□ -0.8
CBWD3-208ENST00000612050 OR4S1Q8NGB4 309 aa10.07□□□□□ -0.8
CBWD3-208ENST00000612050 OR52N4Q8NGI2 321 aa10.07□□□□□ -0.8
CBWD3-208ENST00000612050 OR4D6Q8NGJ1 314 aa10.07□□□□□ -0.8
CBWD3-208ENST00000612050 OR51A2Q8NGJ7 313 aa10.07□□□□□ -0.8
CBWD3-208ENST00000612050 FBLIM1Q8WUP2 373 aa10.07□□□□□ -0.8
CBWD3-208ENST00000612050 SSX3Q99909 188 aa10.07□□□□□ -0.8
CBWD3-208ENST00000612050 PPA2Q9H2U2 334 aa10.07□□□□□ -0.8
CBWD3-208ENST00000612050 TAS2R3Q9NYW6 316 aa10.07□□□□□ -0.8
CBWD3-208ENST00000612050 IL36RNQ9UBH0 155 aa10.07□□□□□ -0.8
CBWD3-208ENST00000612050 PITPNC1Q9UKF7 332 aa10.07□□□□□ -0.8
CBWD3-208ENST00000612050 BLOC1S6Q9UL45 172 aa10.07□□□□□ -0.8
CBWD3-208ENST00000612050 FOXJ3Q9UPW0 622 aa10.07□□□□□ -0.8
CBWD3-208ENST00000612050 SESN1Q9Y6P5 492 aa10.07□□□□□ -0.8
CBWD3-208ENST00000612050 H3BUX3 64 aa10.06□□□□□ -0.8
CBWD3-208ENST00000612050 CD1AP06126 327 aa10.06□□□□□ -0.8
CBWD3-208ENST00000612050 FSTP19883 344 aa10.06□□□□□ -0.8
CBWD3-208ENST00000612050 OMGP23515 440 aa10.06□□□□□ -0.8
CBWD3-208ENST00000612050 C21orf33P30042 268 aaPredicted RBP10.06□□□□□ -0.8
CBWD3-208ENST00000612050 RANBP1P43487 201 aa10.06□□□□□ -0.8
CBWD3-208ENST00000612050 OR3A1P47881 315 aa10.06□□□□□ -0.8
CBWD3-208ENST00000612050 DLX1P56177 255 aa10.06□□□□□ -0.8
CBWD3-208ENST00000612050 DOC2BQ14184 412 aa10.06□□□□□ -0.8
CBWD3-208ENST00000612050 MED22Q15528 200 aa10.06□□□□□ -0.8
CBWD3-208ENST00000612050 ZNF529Q6P280 563 aa10.06□□□□□ -0.8
CBWD3-208ENST00000612050 LIAT1Q6ZQX7 453 aa10.06□□□□□ -0.8
CBWD3-208ENST00000612050 RTN4RL2Q86UN3 420 aa10.06□□□□□ -0.8
CBWD3-208ENST00000612050 OSR2Q8N2R0 312 aa10.06□□□□□ -0.8
CBWD3-208ENST00000612050 NANOGP1Q8N7R0 232 aa10.06□□□□□ -0.8
CBWD3-208ENST00000612050 TPRX1Q8N7U7 411 aa10.06□□□□□ -0.8
CBWD3-208ENST00000612050 NKAIN3Q8N8D7 197 aa10.06□□□□□ -0.8
CBWD3-208ENST00000612050 NDNFQ8TB73 568 aa10.06□□□□□ -0.8
CBWD3-208ENST00000612050 ZNF596Q8TC21 504 aa10.06□□□□□ -0.8
CBWD3-208ENST00000612050 RGP1Q92546 391 aaPredicted RBP10.06□□□□□ -0.8
CBWD3-208ENST00000612050 CREB3L1Q96BA8 519 aa10.06□□□□□ -0.8
CBWD3-208ENST00000612050 MALSU1Q96EH3 234 aa10.06□□□□□ -0.8
CBWD3-208ENST00000612050 OR14A2Q96R54 314 aa10.06□□□□□ -0.8
CBWD3-208ENST00000612050 ZNF184Q99676 751 aaPredicted RBP10.06□□□□□ -0.8
CBWD3-208ENST00000612050 CLEC7AQ9BXN2 247 aa10.06□□□□□ -0.8
CBWD3-208ENST00000612050 CCDC90BQ9GZT6 254 aa10.06□□□□□ -0.8
CBWD3-208ENST00000612050 SLITRK2Q9H156 845 aa10.06□□□□□ -0.8
CBWD3-208ENST00000612050 TCF7L1Q9HCS4 588 aa10.06□□□□□ -0.8
CBWD3-208ENST00000612050 ING3Q9NXR8 418 aa10.06□□□□□ -0.8
CBWD3-208ENST00000612050 NKX1-2Q9UD57 310 aaPredicted RBP10.06□□□□□ -0.8
CBWD3-208ENST00000612050 ST3GAL6Q9Y274 331 aa10.06□□□□□ -0.8
CBWD3-208ENST00000612050 MMP24Q9Y5R2 645 aa10.06□□□□□ -0.8
CBWD3-208ENST00000612050 A0A0G2JK05 382 aa10.05□□□□□ -0.8
CBWD3-208ENST00000612050 TRBV5-5A0A0J9YX44 114 aa10.05□□□□□ -0.8
CBWD3-208ENST00000612050 CLPSL1A2RUU4 121 aa10.05□□□□□ -0.8
CBWD3-208ENST00000612050 MEGF11A6BM72 1044 aa10.05□□□□□ -0.8
CBWD3-208ENST00000612050 ZNF729A6NN14 1252 aaPredicted RBP10.05□□□□□ -0.8
CBWD3-208ENST00000612050 TOR1AO14656 332 aa10.05□□□□□ -0.8
CBWD3-208ENST00000612050 OR7C1O76099 320 aaPredicted RBP10.05□□□□□ -0.8
CBWD3-208ENST00000612050 GTF2F2P13984 249 aa10.05□□□□□ -0.8
CBWD3-208ENST00000612050 SERPINA2P20848 420 aa10.05□□□□□ -0.8
CBWD3-208ENST00000612050 MDKP21741 143 aaPredicted RBP10.05□□□□□ -0.8
CBWD3-208ENST00000612050 CEACAM3P40198 252 aa10.05□□□□□ -0.8
CBWD3-208ENST00000612050 AESQ08117 197 aa10.05□□□□□ -0.8
CBWD3-208ENST00000612050 ATXN7L3Q14CW9 347 aaPredicted RBP10.05□□□□□ -0.8
CBWD3-208ENST00000612050 SPHARQ15513 63 aa10.05□□□□□ -0.8
CBWD3-208ENST00000612050 MPV17LQ2QL34 196 aa10.05□□□□□ -0.8
CBWD3-208ENST00000612050 MINOS1Q5TGZ0 78 aa10.05□□□□□ -0.8
CBWD3-208ENST00000612050 RNLSQ5VYX0 342 aa10.05□□□□□ -0.8
CBWD3-208ENST00000612050 OLFML2AQ68BL7 652 aa10.05□□□□□ -0.8
CBWD3-208ENST00000612050 CDH26Q8IXH8 852 aa10.05□□□□□ -0.8
CBWD3-208ENST00000612050 OR51T1Q8NGJ9 327 aa10.05□□□□□ -0.8
CBWD3-208ENST00000612050 NEK7Q8TDX7 302 aa10.05□□□□□ -0.8
CBWD3-208ENST00000612050 CAPSLQ8WWF8 208 aa10.05□□□□□ -0.8
CBWD3-208ENST00000612050 MEGF9Q9H1U4 602 aa10.05□□□□□ -0.8
CBWD3-208ENST00000612050 TMEM133Q9H2Q1 129 aa10.05□□□□□ -0.8
CBWD3-208ENST00000612050 Q9H521 79 aa10.05□□□□□ -0.8
CBWD3-208ENST00000612050 SPACA1Q9HBV2 294 aa10.05□□□□□ -0.8
CBWD3-208ENST00000612050 RAB9BQ9NP90 201 aa10.05□□□□□ -0.8
CBWD3-208ENST00000612050 IL36GQ9NZH8 169 aa10.05□□□□□ -0.8
CBWD3-208ENST00000612050 C1RLQ9NZP8 487 aa10.05□□□□□ -0.8
CBWD3-208ENST00000612050 MINOS1-NBL1R4GNA1 71 aa10.05□□□□□ -0.8
CBWD3-208ENST00000612050 MEIKINA0A087WXM9 373 aa10.04□□□□□ -0.8
CBWD3-208ENST00000612050 ODAMA1E959 279 aa10.04□□□□□ -0.8
CBWD3-208ENST00000612050 MEX3AA1L020 520 aaKnown RBP10.04□□□□□ -0.8
CBWD3-208ENST00000612050 SLC33A1O00400 549 aaPredicted RBP10.04□□□□□ -0.8
CBWD3-208ENST00000612050 HSPB6O14558 160 aa10.04□□□□□ -0.8
CBWD3-208ENST00000612050 RGS10O43665 173 aa10.04□□□□□ -0.8
CBWD3-208ENST00000612050 GPX5O75715 221 aa10.04□□□□□ -0.8
CBWD3-208ENST00000612050 LALBAP00709 142 aa10.04□□□□□ -0.8
CBWD3-208ENST00000612050 MYF6P23409 242 aa10.04□□□□□ -0.8
CBWD3-208ENST00000612050 HTR1DP28221 377 aa10.04□□□□□ -0.8
CBWD3-208ENST00000612050 OR3A4PP47883 348 aa10.04□□□□□ -0.8
CBWD3-208ENST00000612050 PRRX1P54821 245 aa10.04□□□□□ -0.8
CBWD3-208ENST00000612050 TRAM1Q15629 374 aa10.04□□□□□ -0.8
CBWD3-208ENST00000612050 FAM189A2Q15884 450 aa10.04□□□□□ -0.8
CBWD3-208ENST00000612050 TAF9Q16594 264 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms