RNA–Protein interactions for RNA: ENST00000611736.5

VEGFA-226, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,239 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-226ENST00000611736 ZNF782Q6ZMW2 699 aaPredicted RBP21.27■■□□□ 1
VEGFA-226ENST00000611736 TCF23Q7RTU1 214 aa21.27■■□□□ 1
VEGFA-226ENST00000611736 CHST4Q8NCG5 386 aa21.27■■□□□ 1
VEGFA-226ENST00000611736 SLC25A28Q96A46 364 aa21.27■■□□□ 1
VEGFA-226ENST00000611736 ZMAT3Q9HA38 289 aaKnown RBP21.27■■□□□ 1
VEGFA-226ENST00000611736 SF3B6Q9Y3B4 125 aaKnown RBP21.27■■□□□ 1
VEGFA-226ENST00000611736 FAM96BQ9Y3D0 163 aa21.27■■□□□ 1
VEGFA-226ENST00000611736 hADV38S2A0JD32 116 aa21.26■□□□□ 0.99
VEGFA-226ENST00000611736 MEIOCA2RUB1 952 aa21.26■□□□□ 0.99
VEGFA-226ENST00000611736 MELTFP08582 738 aa21.26■□□□□ 0.99
VEGFA-226ENST00000611736 SERPINA2P20848 420 aa21.26■□□□□ 0.99
VEGFA-226ENST00000611736 COX7A1P24310 79 aa21.26■□□□□ 0.99
VEGFA-226ENST00000611736 P2RX3P56373 397 aa21.26■□□□□ 0.99
VEGFA-226ENST00000611736 GPR50Q13585 617 aa21.26■□□□□ 0.99
VEGFA-226ENST00000611736 FAM27D1Q5T7N8 215 aa21.26■□□□□ 0.99
VEGFA-226ENST00000611736 MUL1Q969V5 352 aa21.26■□□□□ 0.99
VEGFA-226ENST00000611736 ING3Q9NXR8 418 aa21.26■□□□□ 0.99
VEGFA-226ENST00000611736 IL36GQ9NZH8 169 aa21.26■□□□□ 0.99
VEGFA-226ENST00000611736 C17orf98A8MV24 154 aa21.25■□□□□ 0.99
VEGFA-226ENST00000611736 CLDN34H7C241 214 aa21.25■□□□□ 0.99
VEGFA-226ENST00000611736 HSPB6O14558 160 aa21.25■□□□□ 0.99
VEGFA-226ENST00000611736 SAA4P35542 130 aa21.25■□□□□ 0.99
VEGFA-226ENST00000611736 IL13RA2Q14627 380 aa21.25■□□□□ 0.99
VEGFA-226ENST00000611736 SLC22A6Q4U2R8 563 aa21.25■□□□□ 0.99
VEGFA-226ENST00000611736 UNQ9370/PRO34162Q6UXP9 181 aa21.25■□□□□ 0.99
VEGFA-226ENST00000611736 Q8NFD4 153 aa21.25■□□□□ 0.99
VEGFA-226ENST00000611736 OR51T1Q8NGJ9 327 aa21.25■□□□□ 0.99
VEGFA-226ENST00000611736 TMEM203Q969S6 136 aa21.25■□□□□ 0.99
VEGFA-226ENST00000611736 ZNF714Q96N38 554 aa21.25■□□□□ 0.99
VEGFA-226ENST00000611736 HEXA-AS1Q9H8Q6 139 aa21.25■□□□□ 0.99
VEGFA-226ENST00000611736 LINC00312Q9Y6C7 94 aa21.25■□□□□ 0.99
VEGFA-226ENST00000611736 CSTBP04080 98 aaKnown RBP21.24■□□□□ 0.99
VEGFA-226ENST00000611736 RNASE1P07998 156 aaKnown RBP21.24■□□□□ 0.99
VEGFA-226ENST00000611736 ERP29P30040 261 aaKnown RBP21.24■□□□□ 0.99
VEGFA-226ENST00000611736 AESQ08117 197 aa21.24■□□□□ 0.99
VEGFA-226ENST00000611736 MLLT11Q13015 90 aaPredicted RBP21.24■□□□□ 0.99
VEGFA-226ENST00000611736 ATXN7L3Q14CW9 347 aaPredicted RBP21.24■□□□□ 0.99
VEGFA-226ENST00000611736 CEACAM19Q7Z692 300 aa21.24■□□□□ 0.99
VEGFA-226ENST00000611736 TRAPPC6BQ86SZ2 158 aa21.24■□□□□ 0.99
VEGFA-226ENST00000611736 OSR2Q8N2R0 312 aa21.24■□□□□ 0.99
VEGFA-226ENST00000611736 GCDHQ92947 438 aaPredicted RBP21.24■□□□□ 0.99
VEGFA-226ENST00000611736 ISYNA1Q9NPH2 558 aa21.24■□□□□ 0.99
VEGFA-226ENST00000611736 MRPS28Q9Y2Q9 187 aaKnown RBP21.24■□□□□ 0.99
VEGFA-226ENST00000611736 DENRO43583 198 aaKnown RBP21.23■□□□□ 0.99
VEGFA-226ENST00000611736 GLIPR1P48060 266 aa21.23■□□□□ 0.99
VEGFA-226ENST00000611736 GP2P55259 537 aaKnown RBP21.23■□□□□ 0.99
VEGFA-226ENST00000611736 RPS25P62851 125 aaKnown RBP21.23■□□□□ 0.99
VEGFA-226ENST00000611736 TPBGQ13641 420 aa21.23■□□□□ 0.99
VEGFA-226ENST00000611736 TBCEQ15813 527 aaPredicted RBP21.23■□□□□ 0.99
VEGFA-226ENST00000611736 PAN3Q58A45 887 aaKnown RBP21.23■□□□□ 0.99
VEGFA-226ENST00000611736 TCF7L1Q9HCS4 588 aa21.23■□□□□ 0.99
VEGFA-226ENST00000611736 ST3GAL6Q9Y274 331 aa21.23■□□□□ 0.99
VEGFA-226ENST00000611736 TRAV24A0A0B4J272 114 aa21.22■□□□□ 0.99
VEGFA-226ENST00000611736 A0A1W2PP11 408 aa21.22■□□□□ 0.99
VEGFA-226ENST00000611736 FUOMA2VDF0 154 aa21.22■□□□□ 0.99
VEGFA-226ENST00000611736 PAHP00439 452 aa21.22■□□□□ 0.99
VEGFA-226ENST00000611736 FBP1P09467 338 aa21.22■□□□□ 0.99
VEGFA-226ENST00000611736 RBM11P57052 281 aaKnown RBP21.22■□□□□ 0.99
VEGFA-226ENST00000611736 KRBOX4Q5JUW0 171 aa21.22■□□□□ 0.99
VEGFA-226ENST00000611736 AWAT2Q6E213 333 aa21.22■□□□□ 0.99
VEGFA-226ENST00000611736 GLIPR1L1Q6UWM5 242 aa21.22■□□□□ 0.99
VEGFA-226ENST00000611736 NKAIN3Q8N8D7 197 aa21.22■□□□□ 0.99
VEGFA-226ENST00000611736 SSMEM1Q8WWF3 244 aa21.22■□□□□ 0.99
VEGFA-226ENST00000611736 COQ2Q96H96 371 aa21.22■□□□□ 0.99
VEGFA-226ENST00000611736 MGLLQ99685 303 aa21.22■□□□□ 0.99
VEGFA-226ENST00000611736 ZNF581Q9P0T4 197 aa21.22■□□□□ 0.99
VEGFA-226ENST00000611736 TRGV10A0A0A0MS01 117 aa21.21■□□□□ 0.99
VEGFA-226ENST00000611736 ZNF780AO75290 641 aaPredicted RBP21.21■□□□□ 0.99
VEGFA-226ENST00000611736 RBP4P02753 201 aa21.21■□□□□ 0.99
VEGFA-226ENST00000611736 CSN2P05814 226 aa21.21■□□□□ 0.99
VEGFA-226ENST00000611736 IGHV1-8P0DP01 117 aa21.21■□□□□ 0.99
VEGFA-226ENST00000611736 CPEP16870 476 aa21.21■□□□□ 0.99
VEGFA-226ENST00000611736 GABARAPL2P60520 117 aa21.21■□□□□ 0.99
VEGFA-226ENST00000611736 HSD17B12Q53GQ0 312 aa21.21■□□□□ 0.99
VEGFA-226ENST00000611736 ZNF367Q7RTV3 350 aa21.21■□□□□ 0.99
VEGFA-226ENST00000611736 LDLRAD3Q86YD5 345 aa21.21■□□□□ 0.99
VEGFA-226ENST00000611736 CDH26Q8IXH8 852 aa21.21■□□□□ 0.99
VEGFA-226ENST00000611736 OR4D6Q8NGJ1 314 aa21.21■□□□□ 0.99
VEGFA-226ENST00000611736 C17orf50Q8WW18 174 aa21.21■□□□□ 0.99
VEGFA-226ENST00000611736 PPIL3Q9H2H8 161 aaKnown RBP21.21■□□□□ 0.99
VEGFA-226ENST00000611736 PCDHB16Q9NRJ7 776 aa21.21■□□□□ 0.99
VEGFA-226ENST00000611736 UBE2J1Q9Y385 318 aaPredicted RBP21.21■□□□□ 0.99
VEGFA-226ENST00000611736 ODAMA1E959 279 aa21.2■□□□□ 0.98
VEGFA-226ENST00000611736 MEGF11A6BM72 1044 aa21.2■□□□□ 0.98
VEGFA-226ENST00000611736 GEMIN2O14893 280 aaKnown RBP21.2■□□□□ 0.98
VEGFA-226ENST00000611736 SC5DO75845 299 aa21.2■□□□□ 0.98
VEGFA-226ENST00000611736 OR7C1O76099 320 aaPredicted RBP21.2■□□□□ 0.98
VEGFA-226ENST00000611736 IGHV4-59P01825 116 aa21.2■□□□□ 0.98
VEGFA-226ENST00000611736 MIDNQ504T8 468 aa21.2■□□□□ 0.98
VEGFA-226ENST00000611736 NHLRC3Q5JS37 347 aa21.2■□□□□ 0.98
VEGFA-226ENST00000611736 TMEM86BQ8N661 226 aa21.2■□□□□ 0.98
VEGFA-226ENST00000611736 CHIAQ9BZP6 476 aa21.2■□□□□ 0.98
VEGFA-226ENST00000611736 ACOT13Q9NPJ3 140 aa21.2■□□□□ 0.98
VEGFA-226ENST00000611736 TMEM89A2RUT3 159 aa21.19■□□□□ 0.98
VEGFA-226ENST00000611736 GTF2F2P13984 249 aa21.19■□□□□ 0.98
VEGFA-226ENST00000611736 GPR176Q14439 515 aa21.19■□□□□ 0.98
VEGFA-226ENST00000611736 C16orf87Q6PH81 154 aa21.19■□□□□ 0.98
VEGFA-226ENST00000611736 LRRTM1Q86UE6 522 aa21.19■□□□□ 0.98
VEGFA-226ENST00000611736 LYPD6Q86Y78 171 aa21.19■□□□□ 0.98
VEGFA-226ENST00000611736 OR13D1Q8NGV5 346 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms