RNA–Protein interactions for RNA: ENST00000611598.1

PCDHGB1-202, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGB1, Length 2,592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-202ENST00000611598 ZIC4Q8N9L1 334 aa13.06□□□□□ -0.32
PCDHGB1-202ENST00000611598 ZNF610Q8N9Z0 462 aa13.06□□□□□ -0.32
PCDHGB1-202ENST00000611598 CCDC71LQ8N9Z2 235 aa13.06□□□□□ -0.32
PCDHGB1-202ENST00000611598 HIST1H2BHQ93079 126 aa13.06□□□□□ -0.32
PCDHGB1-202ENST00000611598 HIST1H2BNQ99877 126 aa13.06□□□□□ -0.32
PCDHGB1-202ENST00000611598 HIST1H2BMQ99879 126 aa13.06□□□□□ -0.32
PCDHGB1-202ENST00000611598 DEFB126Q9BYW3 111 aa13.06□□□□□ -0.32
PCDHGB1-202ENST00000611598 BCO1Q9HAY6 547 aa13.06□□□□□ -0.32
PCDHGB1-202ENST00000611598 GAR1Q9NY12 217 aaKnown RBP13.06□□□□□ -0.32
PCDHGB1-202ENST00000611598 KIAA1456Q9P272 454 aa13.06□□□□□ -0.32
PCDHGB1-202ENST00000611598 FOXD3Q9UJU5 478 aaPredicted RBP13.06□□□□□ -0.32
PCDHGB1-202ENST00000611598 SCAF4O95104 1147 aaKnown RBP13.06□□□□□ -0.32
PCDHGB1-202ENST00000611598 NRASP01111 189 aa13.06□□□□□ -0.32
PCDHGB1-202ENST00000611598 GNRHRP30968 328 aa13.06□□□□□ -0.32
PCDHGB1-202ENST00000611598 DYNLT3P51808 116 aa13.06□□□□□ -0.32
PCDHGB1-202ENST00000611598 CNN3Q15417 329 aaKnown RBP13.06□□□□□ -0.32
PCDHGB1-202ENST00000611598 RAET1LQ5VY80 246 aa13.06□□□□□ -0.32
PCDHGB1-202ENST00000611598 WDR74Q6RFH5 385 aaPredicted RBP13.06□□□□□ -0.32
PCDHGB1-202ENST00000611598 OR10D4PQ8NGN7 298 aa13.06□□□□□ -0.32
PCDHGB1-202ENST00000611598 TMEM222Q9H0R3 208 aa13.06□□□□□ -0.32
PCDHGB1-202ENST00000611598 SMDT1Q9H4I9 107 aa13.06□□□□□ -0.32
PCDHGB1-202ENST00000611598 TREM2Q9NZC2 230 aa13.06□□□□□ -0.32
PCDHGB1-202ENST00000611598 ADAM20O43506 726 aa13.05□□□□□ -0.32
PCDHGB1-202ENST00000611598 SYNGR3O43761 229 aa13.05□□□□□ -0.32
PCDHGB1-202ENST00000611598 CDS2O95674 445 aa13.05□□□□□ -0.32
PCDHGB1-202ENST00000611598 S100A2P29034 98 aa13.05□□□□□ -0.32
PCDHGB1-202ENST00000611598 SP5Q6BEB4 398 aaPredicted RBP13.05□□□□□ -0.32
PCDHGB1-202ENST00000611598 ASCL4Q6XD76 172 aa13.05□□□□□ -0.32
PCDHGB1-202ENST00000611598 TBC1D26Q86UD7 250 aa13.05□□□□□ -0.32
PCDHGB1-202ENST00000611598 MAML2Q8IZL2 1156 aaPredicted RBP13.05□□□□□ -0.32
PCDHGB1-202ENST00000611598 NAT6Q93015 286 aa13.05□□□□□ -0.32
PCDHGB1-202ENST00000611598 ZNF442Q9H7R0 627 aa13.05□□□□□ -0.32
PCDHGB1-202ENST00000611598 LYRM2Q9NU23 88 aaPredicted RBP13.05□□□□□ -0.32
PCDHGB1-202ENST00000611598 WSB1Q9Y6I7 421 aa13.05□□□□□ -0.32
PCDHGB1-202ENST00000611598 YKT6O15498 198 aa13.05□□□□□ -0.32
PCDHGB1-202ENST00000611598 PDCD6O75340 191 aa13.05□□□□□ -0.32
PCDHGB1-202ENST00000611598 TRGC2P03986 189 aa13.05□□□□□ -0.32
PCDHGB1-202ENST00000611598 SOD3P08294 240 aa13.05□□□□□ -0.32
PCDHGB1-202ENST00000611598 LHFPL2Q6ZUX7 228 aa13.05□□□□□ -0.32
PCDHGB1-202ENST00000611598 PLEKHF2Q9H8W4 249 aa13.05□□□□□ -0.32
PCDHGB1-202ENST00000611598 SLC7A10Q9NS82 523 aa13.05□□□□□ -0.32
PCDHGB1-202ENST00000611598 PARPBPQ9NWS1 579 aa13.05□□□□□ -0.32
PCDHGB1-202ENST00000611598 WNT16Q9UBV4 365 aa13.05□□□□□ -0.32
PCDHGB1-202ENST00000611598 UBE2J1Q9Y385 318 aaPredicted RBP13.05□□□□□ -0.32
PCDHGB1-202ENST00000611598 FREM2Q5SZK8 3169 aa13.05□□□□□ -0.32
PCDHGB1-202ENST00000611598 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.04□□□□□ -0.32
PCDHGB1-202ENST00000611598 CYB5BO43169 146 aa13.04□□□□□ -0.32
PCDHGB1-202ENST00000611598 OR7C1O76099 320 aaPredicted RBP13.04□□□□□ -0.32
PCDHGB1-202ENST00000611598 NTF4P34130 210 aa13.04□□□□□ -0.32
PCDHGB1-202ENST00000611598 GPX4P36969 197 aaPredicted RBP13.04□□□□□ -0.32
PCDHGB1-202ENST00000611598 SPIN3Q5JUX0 258 aa13.04□□□□□ -0.32
PCDHGB1-202ENST00000611598 FAM27BQ5VT28 67 aa13.04□□□□□ -0.32
PCDHGB1-202ENST00000611598 ZNF695Q8IW36 515 aa13.04□□□□□ -0.32
PCDHGB1-202ENST00000611598 ZNF100Q8IYN0 542 aa13.04□□□□□ -0.32
PCDHGB1-202ENST00000611598 RHOVQ96L33 236 aa13.04□□□□□ -0.32
PCDHGB1-202ENST00000611598 NOSIPQ9Y314 301 aaKnown RBP13.04□□□□□ -0.32
PCDHGB1-202ENST00000611598 A0A087WWC5 75 aa13.04□□□□□ -0.32
PCDHGB1-202ENST00000611598 TNFSF11O14788 317 aa13.04□□□□□ -0.32
PCDHGB1-202ENST00000611598 TCN2P20062 427 aa13.04□□□□□ -0.32
PCDHGB1-202ENST00000611598 NPBWR2P48146 333 aa13.04□□□□□ -0.32
PCDHGB1-202ENST00000611598 MALLQ13021 153 aa13.04□□□□□ -0.32
PCDHGB1-202ENST00000611598 ZNF154Q13106 437 aa13.04□□□□□ -0.32
PCDHGB1-202ENST00000611598 CALHM1Q8IU99 346 aa13.04□□□□□ -0.32
PCDHGB1-202ENST00000611598 SRXN1Q9BYN0 137 aa13.04□□□□□ -0.32
PCDHGB1-202ENST00000611598 GPR61Q9BZJ8 451 aa13.04□□□□□ -0.32
PCDHGB1-202ENST00000611598 UNKLQ9H9P5 680 aaKnown RBP13.04□□□□□ -0.32
PCDHGB1-202ENST00000611598 CCL3P10147 92 aa13.03□□□□□ -0.32
PCDHGB1-202ENST00000611598 B4GALT1P15291 398 aa13.03□□□□□ -0.32
PCDHGB1-202ENST00000611598 RBM11P57052 281 aaKnown RBP13.03□□□□□ -0.32
PCDHGB1-202ENST00000611598 MRPS34P82930 218 aaKnown RBP13.03□□□□□ -0.32
PCDHGB1-202ENST00000611598 RAB35Q15286 201 aa13.03□□□□□ -0.32
PCDHGB1-202ENST00000611598 ZNF468Q5VIY5 522 aaPredicted RBP13.03□□□□□ -0.32
PCDHGB1-202ENST00000611598 ZNF818PQ6ZRF7 136 aa13.03□□□□□ -0.32
PCDHGB1-202ENST00000611598 SELENOHQ8IZQ5 122 aaKnown RBP13.03□□□□□ -0.32
PCDHGB1-202ENST00000611598 CCDC54Q8NEL0 328 aa13.03□□□□□ -0.32
PCDHGB1-202ENST00000611598 OR1F12Q8NHA8 337 aa13.03□□□□□ -0.32
PCDHGB1-202ENST00000611598 CLDND2Q8NHS1 167 aa13.03□□□□□ -0.32
PCDHGB1-202ENST00000611598 PRDM13Q9H4Q3 707 aa13.03□□□□□ -0.32
PCDHGB1-202ENST00000611598 CALHM2Q9HA72 323 aa13.03□□□□□ -0.32
PCDHGB1-202ENST00000611598 VAMP2P63027 116 aa13.03□□□□□ -0.32
PCDHGB1-202ENST00000611598 ZNF92Q03936 586 aa13.03□□□□□ -0.32
PCDHGB1-202ENST00000611598 ZNF506Q5JVG8 444 aa13.03□□□□□ -0.32
PCDHGB1-202ENST00000611598 TMEM42Q69YG0 159 aa13.03□□□□□ -0.32
PCDHGB1-202ENST00000611598 OR8G5Q8NG78 346 aa13.03□□□□□ -0.32
PCDHGB1-202ENST00000611598 PIGCQ92535 297 aa13.03□□□□□ -0.32
PCDHGB1-202ENST00000611598 TVP23CQ96ET8 276 aa13.03□□□□□ -0.32
PCDHGB1-202ENST00000611598 SIGLEC12Q96PQ1 595 aa13.03□□□□□ -0.32
PCDHGB1-202ENST00000611598 NIPSNAP3BQ9BS92 247 aa13.03□□□□□ -0.32
PCDHGB1-202ENST00000611598 CRLF2Q9HC73 371 aa13.03□□□□□ -0.32
PCDHGB1-202ENST00000611598 A0A0J9YW62 118 aa13.02□□□□□ -0.32
PCDHGB1-202ENST00000611598 ZNF732B4DXR9 585 aa13.02□□□□□ -0.32
PCDHGB1-202ENST00000611598 HSPA12AO43301 675 aa13.02□□□□□ -0.32
PCDHGB1-202ENST00000611598 ZIC3O60481 467 aa13.02□□□□□ -0.32
PCDHGB1-202ENST00000611598 HSPB1P04792 205 aaKnown RBP13.02□□□□□ -0.32
PCDHGB1-202ENST00000611598 ZNF32P17041 273 aa13.02□□□□□ -0.32
PCDHGB1-202ENST00000611598 ZNF385CQ66K41 422 aaPredicted RBP13.02□□□□□ -0.32
PCDHGB1-202ENST00000611598 DPPA2Q7Z7J5 298 aa13.02□□□□□ -0.32
PCDHGB1-202ENST00000611598 TMEM56Q96MV1 263 aa13.02□□□□□ -0.32
PCDHGB1-202ENST00000611598 ALKBH3Q96Q83 286 aaPredicted RBP13.02□□□□□ -0.32
PCDHGB1-202ENST00000611598 TMEM56-RWDD3S4R434 201 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms