RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 HIST1H2BHQ93079 126 aa19.35■□□□□ 0.69
SHANK2-220ENST00000608988 IL22RA2Q969J5 263 aa19.35■□□□□ 0.69
SHANK2-220ENST00000608988 HIST1H2BNQ99877 126 aa19.35■□□□□ 0.69
SHANK2-220ENST00000608988 HIST1H2BMQ99879 126 aa19.35■□□□□ 0.69
SHANK2-220ENST00000608988 UBE2J1Q9Y385 318 aaPredicted RBP19.35■□□□□ 0.69
SHANK2-220ENST00000608988 ZNF727A8MUV8 499 aa19.35■□□□□ 0.69
SHANK2-220ENST00000608988 CDRT15L2A8MXV6 281 aa19.35■□□□□ 0.69
SHANK2-220ENST00000608988 CST2P09228 141 aa19.35■□□□□ 0.69
SHANK2-220ENST00000608988 FUT3P21217 361 aa19.35■□□□□ 0.69
SHANK2-220ENST00000608988 GPX4P36969 197 aaPredicted RBP19.35■□□□□ 0.69
SHANK2-220ENST00000608988 FOXO1Q12778 655 aa19.35■□□□□ 0.69
SHANK2-220ENST00000608988 KRTAP27-1Q3LI81 207 aa19.35■□□□□ 0.69
SHANK2-220ENST00000608988 C20orf196Q8IYI0 205 aa19.35■□□□□ 0.69
SHANK2-220ENST00000608988 SELENOHQ8IZQ5 122 aaKnown RBP19.35■□□□□ 0.69
SHANK2-220ENST00000608988 HIST3H2BBQ8N257 126 aa19.35■□□□□ 0.69
SHANK2-220ENST00000608988 RBM24Q9BX46 236 aaKnown RBP19.35■□□□□ 0.69
SHANK2-220ENST00000608988 ULBP2Q9BZM5 246 aa19.35■□□□□ 0.69
SHANK2-220ENST00000608988 SLC7A11Q9UPY5 501 aa19.35■□□□□ 0.69
SHANK2-220ENST00000608988 H0YL77 283 aa19.34■□□□□ 0.69
SHANK2-220ENST00000608988 DFFBO76075 338 aa19.34■□□□□ 0.69
SHANK2-220ENST00000608988 NRASP01111 189 aa19.34■□□□□ 0.69
SHANK2-220ENST00000608988 KLK2P20151 261 aa19.34■□□□□ 0.69
SHANK2-220ENST00000608988 RND2P52198 227 aa19.34■□□□□ 0.69
SHANK2-220ENST00000608988 HLA-DRB3P79483 266 aa19.34■□□□□ 0.69
SHANK2-220ENST00000608988 ID3Q02535 119 aa19.34■□□□□ 0.69
SHANK2-220ENST00000608988 HAGHQ16775 308 aa19.34■□□□□ 0.69
SHANK2-220ENST00000608988 CYB561D1Q8N8Q1 229 aa19.34■□□□□ 0.69
SHANK2-220ENST00000608988 OR5C1Q8NGR4 320 aa19.34■□□□□ 0.69
SHANK2-220ENST00000608988 TMEM171Q8WVE6 324 aa19.34■□□□□ 0.69
SHANK2-220ENST00000608988 ATP5SQ99766 215 aa19.34■□□□□ 0.69
SHANK2-220ENST00000608988 UFSP2Q9NUQ7 469 aa19.34■□□□□ 0.69
SHANK2-220ENST00000608988 ST3GAL6Q9Y274 331 aa19.34■□□□□ 0.69
SHANK2-220ENST00000608988 LOC102723971A0A1B0GUV8 181 aa19.33■□□□□ 0.69
SHANK2-220ENST00000608988 PROB1E7EW31 1015 aa19.33■□□□□ 0.69
SHANK2-220ENST00000608988 SYNGR3O43761 229 aa19.33■□□□□ 0.69
SHANK2-220ENST00000608988 TAS2R30P59541 319 aa19.33■□□□□ 0.69
SHANK2-220ENST00000608988 C9orf152Q5JTZ5 239 aa19.33■□□□□ 0.69
SHANK2-220ENST00000608988 C1orf87Q8N0U7 546 aa19.33■□□□□ 0.69
SHANK2-220ENST00000608988 GPR137CQ8N3F9 429 aa19.33■□□□□ 0.69
SHANK2-220ENST00000608988 RASL10BQ96S79 203 aa19.33■□□□□ 0.69
SHANK2-220ENST00000608988 RALGAPA1Q6GYQ0 2036 aa19.33■□□□□ 0.68
SHANK2-220ENST00000608988 MED19A0JLT2 244 aaPredicted RBP19.33■□□□□ 0.68
SHANK2-220ENST00000608988 DYNLT3P51808 116 aa19.33■□□□□ 0.68
SHANK2-220ENST00000608988 RBM11P57052 281 aaKnown RBP19.33■□□□□ 0.68
SHANK2-220ENST00000608988 FOXL2P58012 376 aa19.33■□□□□ 0.68
SHANK2-220ENST00000608988 ERVFRD-1P60508 538 aa19.33■□□□□ 0.68
SHANK2-220ENST00000608988 IL22RA1Q8N6P7 574 aa19.33■□□□□ 0.68
SHANK2-220ENST00000608988 OR10D4PQ8NGN7 298 aa19.33■□□□□ 0.68
SHANK2-220ENST00000608988 OR1F12Q8NHA8 337 aa19.33■□□□□ 0.68
SHANK2-220ENST00000608988 ABHD14AQ9BUJ0 271 aa19.33■□□□□ 0.68
SHANK2-220ENST00000608988 DEFB126Q9BYW3 111 aa19.33■□□□□ 0.68
SHANK2-220ENST00000608988 PRDM13Q9H4Q3 707 aa19.33■□□□□ 0.68
SHANK2-220ENST00000608988 SSSCA1O60232 199 aa19.32■□□□□ 0.68
SHANK2-220ENST00000608988 VDAC1P21796 283 aa19.32■□□□□ 0.68
SHANK2-220ENST00000608988 RPL23AP62750 156 aaKnown RBP19.32■□□□□ 0.68
SHANK2-220ENST00000608988 PIGYQ3MUY2 71 aa19.32■□□□□ 0.68
SHANK2-220ENST00000608988 ACSF3Q4G176 576 aaPredicted RBP19.32■□□□□ 0.68
SHANK2-220ENST00000608988 TBC1D26Q86UD7 250 aa19.32■□□□□ 0.68
SHANK2-220ENST00000608988 H1FOOQ8IZA3 346 aaPredicted RBP19.32■□□□□ 0.68
SHANK2-220ENST00000608988 RCC1LQ96I51 464 aaKnown RBP19.32■□□□□ 0.68
SHANK2-220ENST00000608988 ZNF385AQ96PM9 386 aaKnown RBP19.32■□□□□ 0.68
SHANK2-220ENST00000608988 TPSD1Q9BZJ3 242 aa19.32■□□□□ 0.68
SHANK2-220ENST00000608988 GLRX2Q9NS18 164 aa19.32■□□□□ 0.68
SHANK2-220ENST00000608988 CHCHD2Q9Y6H1 151 aaPredicted RBP19.32■□□□□ 0.68
SHANK2-220ENST00000608988 SEC16AO15027 2179 aa19.31■□□□□ 0.68
SHANK2-220ENST00000608988 IGKV1-12A0A0C4DH73 117 aa19.31■□□□□ 0.68
SHANK2-220ENST00000608988 CYB5BO43169 146 aa19.31■□□□□ 0.68
SHANK2-220ENST00000608988 DNPH1O43598 174 aa19.31■□□□□ 0.68
SHANK2-220ENST00000608988 IGKV1D-12P01611 117 aa19.31■□□□□ 0.68
SHANK2-220ENST00000608988 UCP1P25874 307 aa19.31■□□□□ 0.68
SHANK2-220ENST00000608988 GNRHRP30968 328 aa19.31■□□□□ 0.68
SHANK2-220ENST00000608988 PKIAP61925 76 aa19.31■□□□□ 0.68
SHANK2-220ENST00000608988 NMSQ5H8A3 153 aa19.31■□□□□ 0.68
SHANK2-220ENST00000608988 CMTM1Q8IZ96 169 aa19.31■□□□□ 0.68
SHANK2-220ENST00000608988 DEFB119Q8N690 84 aa19.31■□□□□ 0.68
SHANK2-220ENST00000608988 DYRK2Q92630 601 aa19.31■□□□□ 0.68
SHANK2-220ENST00000608988 CPNE4Q96A23 557 aaPredicted RBP19.31■□□□□ 0.68
SHANK2-220ENST00000608988 SF3B5Q9BWJ5 86 aaKnown RBP19.31■□□□□ 0.68
SHANK2-220ENST00000608988 ZNF581Q9P0T4 197 aa19.31■□□□□ 0.68
SHANK2-220ENST00000608988 C5orf42Q9H799 3197 aa19.31■□□□□ 0.68
SHANK2-220ENST00000608988 OR6C6A6NF89 314 aa19.31■□□□□ 0.68
SHANK2-220ENST00000608988 ASCL1P50553 236 aa19.31■□□□□ 0.68
SHANK2-220ENST00000608988 ZNF343Q6P1L6 599 aa19.31■□□□□ 0.68
SHANK2-220ENST00000608988 SPNS3Q6ZMD2 512 aa19.31■□□□□ 0.68
SHANK2-220ENST00000608988 Q8NFD4 153 aa19.31■□□□□ 0.68
SHANK2-220ENST00000608988 SPSB2Q99619 263 aa19.31■□□□□ 0.68
SHANK2-220ENST00000608988 CISD1Q9NZ45 108 aaKnown RBP19.31■□□□□ 0.68
SHANK2-220ENST00000608988 A0A0C4DFX4 3053 aa19.3■□□□□ 0.68
SHANK2-220ENST00000608988 TGIF2-C20orf24A0A0A6YYL0 155 aa19.3■□□□□ 0.68
SHANK2-220ENST00000608988 OR5H1A6NKK0 313 aa19.3■□□□□ 0.68
SHANK2-220ENST00000608988 ZNF205O95201 554 aa19.3■□□□□ 0.68
SHANK2-220ENST00000608988 GLI4P10075 376 aa19.3■□□□□ 0.68
SHANK2-220ENST00000608988 REC114Q7Z4M0 266 aa19.3■□□□□ 0.68
SHANK2-220ENST00000608988 FAM210BQ96KR6 192 aa19.3■□□□□ 0.68
SHANK2-220ENST00000608988 SIGLEC12Q96PQ1 595 aa19.3■□□□□ 0.68
SHANK2-220ENST00000608988 ZNF442Q9H7R0 627 aa19.3■□□□□ 0.68
SHANK2-220ENST00000608988 RNF150Q9ULK6 438 aa19.3■□□□□ 0.68
SHANK2-220ENST00000608988 HS3ST3B1Q9Y662 390 aa19.3■□□□□ 0.68
SHANK2-220ENST00000608988 CLDN34H7C241 214 aa19.29■□□□□ 0.68
SHANK2-220ENST00000608988 ADAM20O43506 726 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms