RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 ERP29P30040 261 aaKnown RBP11.76□□□□□ -0.53
CTSA-219ENST00000607841 OR3A1P47881 315 aa11.76□□□□□ -0.53
CTSA-219ENST00000607841 KCNJ3P48549 501 aa11.76□□□□□ -0.53
CTSA-219ENST00000607841 MEF2CQ06413 473 aaPredicted RBP11.76□□□□□ -0.53
CTSA-219ENST00000607841 EDDM3AQ14507 147 aa11.76□□□□□ -0.53
CTSA-219ENST00000607841 PDCD1Q15116 288 aa11.76□□□□□ -0.53
CTSA-219ENST00000607841 PAN3Q58A45 887 aaKnown RBP11.76□□□□□ -0.53
CTSA-219ENST00000607841 C1orf229Q6ZS94 237 aaPredicted RBP11.76□□□□□ -0.53
CTSA-219ENST00000607841 C1orf122Q6ZSJ8 110 aa11.76□□□□□ -0.53
CTSA-219ENST00000607841 OR4S1Q8NGB4 309 aa11.76□□□□□ -0.53
CTSA-219ENST00000607841 OR4M1Q8NGD0 313 aa11.76□□□□□ -0.53
CTSA-219ENST00000607841 KCNG3Q8TAE7 436 aa11.76□□□□□ -0.53
CTSA-219ENST00000607841 C1orf147Q96MC9 270 aaPredicted RBP11.76□□□□□ -0.53
CTSA-219ENST00000607841 PCGF1Q9BSM1 259 aa11.76□□□□□ -0.53
CTSA-219ENST00000607841 BARHL1Q9BZE3 327 aa11.76□□□□□ -0.53
CTSA-219ENST00000607841 SELENOIQ9C0D9 397 aa11.76□□□□□ -0.53
CTSA-219ENST00000607841 C19orf12Q9NSK7 152 aa11.76□□□□□ -0.53
CTSA-219ENST00000607841 SETD2Q9BYW2 2564 aaPredicted RBP11.76□□□□□ -0.53
CTSA-219ENST00000607841 MALRD1Q5VYJ5 2156 aa11.76□□□□□ -0.53
CTSA-219ENST00000607841 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.76□□□□□ -0.537e-9■■■■□ 24.6
CTSA-219ENST00000607841 FAM90A10PA6NDY2 464 aa11.75□□□□□ -0.53
CTSA-219ENST00000607841 FAM90A18PA6NE21 464 aa11.75□□□□□ -0.53
CTSA-219ENST00000607841 FAM90A16PA6NEW6 464 aa11.75□□□□□ -0.53
CTSA-219ENST00000607841 FAM90A20PA6NIJ5 464 aa11.75□□□□□ -0.53
CTSA-219ENST00000607841 FAM90A8PA6NJQ4 464 aa11.75□□□□□ -0.53
CTSA-219ENST00000607841 FAM90A7PA6NKC0 464 aa11.75□□□□□ -0.53
CTSA-219ENST00000607841 FAM90A22PA8MWA6 464 aa11.75□□□□□ -0.53
CTSA-219ENST00000607841 FAM90A12PA8MX19 464 aa11.75□□□□□ -0.53
CTSA-219ENST00000607841 FAM90A5PA8MXJ8 464 aa11.75□□□□□ -0.53
CTSA-219ENST00000607841 FAM90A23PA8MXZ1 464 aa11.75□□□□□ -0.53
CTSA-219ENST00000607841 MPIG6BO95866 241 aa11.75□□□□□ -0.53
CTSA-219ENST00000607841 FAM90A15PP0C7V4 464 aa11.75□□□□□ -0.53
CTSA-219ENST00000607841 FAM90A13PP0C7W8 464 aa11.75□□□□□ -0.53
CTSA-219ENST00000607841 FAM90A14PP0C7W9 464 aa11.75□□□□□ -0.53
CTSA-219ENST00000607841 FAM90A24PP0C7X0 464 aa11.75□□□□□ -0.53
CTSA-219ENST00000607841 SMIM18P0DKX4 95 aa11.75□□□□□ -0.53
CTSA-219ENST00000607841 VSIG8P0DPA2 414 aa11.75□□□□□ -0.53
CTSA-219ENST00000607841 P2RX3P56373 397 aa11.75□□□□□ -0.53
CTSA-219ENST00000607841 TAF9Q16594 264 aa11.75□□□□□ -0.53
CTSA-219ENST00000607841 TMEM200BQ69YZ2 307 aa11.75□□□□□ -0.53
CTSA-219ENST00000607841 TMEM104Q8NE00 496 aa11.75□□□□□ -0.53
CTSA-219ENST00000607841 YIPF6Q96EC8 236 aa11.75□□□□□ -0.53
CTSA-219ENST00000607841 GFI1Q99684 422 aa11.75□□□□□ -0.53
CTSA-219ENST00000607841 PPA2Q9H2U2 334 aa11.75□□□□□ -0.53
CTSA-219ENST00000607841 BANF2Q9H503 90 aa11.75□□□□□ -0.53
CTSA-219ENST00000607841 STEAP1Q9UHE8 339 aa11.75□□□□□ -0.53
CTSA-219ENST00000607841 ABCA2Q9BZC7 2435 aa11.74□□□□□ -0.53
CTSA-219ENST00000607841 TRAV24A0A0B4J272 114 aa11.74□□□□□ -0.53
CTSA-219ENST00000607841 SHISA3A0PJX4 238 aa11.74□□□□□ -0.53
CTSA-219ENST00000607841 IFITM5A6NNB3 132 aa11.74□□□□□ -0.53
CTSA-219ENST00000607841 AIREO43918 545 aa11.74□□□□□ -0.53
CTSA-219ENST00000607841 IFNA2P01563 188 aa11.74□□□□□ -0.53
CTSA-219ENST00000607841 MMP9P14780 707 aa11.74□□□□□ -0.53
CTSA-219ENST00000607841 CFPP27918 469 aa11.74□□□□□ -0.53
CTSA-219ENST00000607841 BPIFB3P59826 476 aa11.74□□□□□ -0.53
CTSA-219ENST00000607841 RBM39Q14498 530 aaKnown RBP11.74□□□□□ -0.53
CTSA-219ENST00000607841 P2RY14Q15391 338 aa11.74□□□□□ -0.53
CTSA-219ENST00000607841 KRBOX4Q5JUW0 171 aa11.74□□□□□ -0.53
CTSA-219ENST00000607841 ATAD3CQ5T2N8 411 aa11.74□□□□□ -0.53
CTSA-219ENST00000607841 GPR157Q5UAW9 335 aa11.74□□□□□ -0.53
CTSA-219ENST00000607841 OR2W3Q7Z3T1 314 aa11.74□□□□□ -0.53
CTSA-219ENST00000607841 SUMF2Q8NBJ7 301 aa11.74□□□□□ -0.53
CTSA-219ENST00000607841 FAM46BQ96A09 425 aa11.74□□□□□ -0.53
CTSA-219ENST00000607841 SLC25A28Q96A46 364 aa11.74□□□□□ -0.53
CTSA-219ENST00000607841 URM1Q9BTM9 101 aaKnown RBP11.74□□□□□ -0.53
CTSA-219ENST00000607841 DPCDQ9BVM2 203 aaPredicted RBP11.74□□□□□ -0.53
CTSA-219ENST00000607841 TMEM59Q9BXS4 323 aa11.74□□□□□ -0.53
CTSA-219ENST00000607841 SIRPDQ9H106 197 aa11.74□□□□□ -0.53
CTSA-219ENST00000607841 METTL8Q9H825 291 aaKnown RBP11.74□□□□□ -0.53
CTSA-219ENST00000607841 NUP50Q9UKX7 468 aa11.74□□□□□ -0.53
CTSA-219ENST00000607841 TLN2Q9Y4G6 2542 aa11.74□□□□□ -0.53
CTSA-219ENST00000607841 TRGV10A0A0A0MS01 117 aa11.73□□□□□ -0.53
CTSA-219ENST00000607841 NOTOA8MTQ0 251 aa11.73□□□□□ -0.53
CTSA-219ENST00000607841 TMEM14DPA8MWL7 114 aa11.73□□□□□ -0.53
CTSA-219ENST00000607841 MCRIP1C9JLW8 97 aa11.73□□□□□ -0.53
CTSA-219ENST00000607841 AIPO00170 330 aa11.73□□□□□ -0.53
CTSA-219ENST00000607841 HSPB6O14558 160 aa11.73□□□□□ -0.53
CTSA-219ENST00000607841 FSHBP01225 129 aa11.73□□□□□ -0.53
CTSA-219ENST00000607841 FPR2P25090 351 aa11.73□□□□□ -0.53
CTSA-219ENST00000607841 OR10A3P58181 314 aa11.73□□□□□ -0.53
CTSA-219ENST00000607841 AESQ08117 197 aa11.73□□□□□ -0.53
CTSA-219ENST00000607841 ATXN7L3Q14CW9 347 aaPredicted RBP11.73□□□□□ -0.53
CTSA-219ENST00000607841 FAM189A2Q15884 450 aa11.73□□□□□ -0.53
CTSA-219ENST00000607841 HES5Q5TA89 166 aa11.73□□□□□ -0.53
CTSA-219ENST00000607841 NCR3LG1Q68D85 454 aa11.73□□□□□ -0.53
CTSA-219ENST00000607841 VMO1Q7Z5L0 202 aa11.73□□□□□ -0.53
CTSA-219ENST00000607841 BPIFB2Q8N4F0 458 aa11.73□□□□□ -0.53
CTSA-219ENST00000607841 OR13F1Q8NGS4 319 aa11.73□□□□□ -0.53
CTSA-219ENST00000607841 FAM3DQ96BQ1 224 aa11.73□□□□□ -0.53
CTSA-219ENST00000607841 Q96M66 194 aa11.73□□□□□ -0.53
CTSA-219ENST00000607841 TBX15Q96SF7 602 aa11.73□□□□□ -0.53
CTSA-219ENST00000607841 CENPOQ9BU64 300 aa11.73□□□□□ -0.53
CTSA-219ENST00000607841 NCOR1P1Q9H4R4 102 aa11.73□□□□□ -0.53
CTSA-219ENST00000607841 OR6C3Q9NZP0 311 aa11.73□□□□□ -0.53
CTSA-219ENST00000607841 UBE2J1Q9Y385 318 aaPredicted RBP11.73□□□□□ -0.53
CTSA-219ENST00000607841 LINC00312Q9Y6C7 94 aa11.73□□□□□ -0.53
CTSA-219ENST00000607841 TRAV40A0A0B4J280 105 aa11.72□□□□□ -0.53
CTSA-219ENST00000607841 ODAMA1E959 279 aa11.72□□□□□ -0.53
CTSA-219ENST00000607841 GLAP06280 429 aa11.72□□□□□ -0.53
CTSA-219ENST00000607841 ZNF728P0DKX0 622 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms