RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 ISG20L2Q9H9L3 353 aaKnown RBP6.1□□□□□ -1.43
CUX1-219ENST00000606749 MYRFQ9Y2G1 1151 aa6.1□□□□□ -1.43
CUX1-219ENST00000606749 PRKDCP78527 4128 aaKnown RBP6.1□□□□□ -1.43
CUX1-219ENST00000606749 KIAA2026Q5HYC2 2103 aa6.1□□□□□ -1.43
CUX1-219ENST00000606749 ODAMA1E959 279 aa6.09□□□□□ -1.43
CUX1-219ENST00000606749 FAM172BPA6NC97 362 aa6.09□□□□□ -1.43
CUX1-219ENST00000606749 SNTNA6NMZ2 147 aa6.09□□□□□ -1.43
CUX1-219ENST00000606749 LEUTXA8MZ59 168 aa6.09□□□□□ -1.43
CUX1-219ENST00000606749 E9PI62 339 aa6.09□□□□□ -1.43
CUX1-219ENST00000606749 BUB1B-PAK6H3BSN5 160 aa6.09□□□□□ -1.43
CUX1-219ENST00000606749 SLC33A1O00400 549 aaPredicted RBP6.09□□□□□ -1.43
CUX1-219ENST00000606749 DEGS1O15121 323 aa6.09□□□□□ -1.43
CUX1-219ENST00000606749 ZFPL1O95159 310 aa6.09□□□□□ -1.43
CUX1-219ENST00000606749 AMY1AP04745 511 aa6.09□□□□□ -1.43
CUX1-219ENST00000606749 AMY2AP04746 511 aa6.09□□□□□ -1.43
CUX1-219ENST00000606749 ALDOBP05062 364 aa6.09□□□□□ -1.43
CUX1-219ENST00000606749 CSN2P05814 226 aa6.09□□□□□ -1.43
CUX1-219ENST00000606749 CGB3P0DN86 165 aa6.09□□□□□ -1.43
CUX1-219ENST00000606749 CGB7P0DN87 165 aa6.09□□□□□ -1.43
CUX1-219ENST00000606749 TMEM225BP0DP42 221 aa6.09□□□□□ -1.43
CUX1-219ENST00000606749 DBTP11182 482 aaKnown RBP6.09□□□□□ -1.43
CUX1-219ENST00000606749 ZNF44P15621 663 aa6.09□□□□□ -1.43
CUX1-219ENST00000606749 CD34P28906 385 aa6.09□□□□□ -1.43
CUX1-219ENST00000606749 BRS3P32247 399 aa6.09□□□□□ -1.43
CUX1-219ENST00000606749 PRRX1P54821 245 aa6.09□□□□□ -1.43
CUX1-219ENST00000606749 ZP1P60852 638 aa6.09□□□□□ -1.43
CUX1-219ENST00000606749 KISS1Q15726 138 aa6.09□□□□□ -1.43
CUX1-219ENST00000606749 C17orf58Q2M2W7 97 aa6.09□□□□□ -1.43
CUX1-219ENST00000606749 TCTEX1D4Q5JR98 221 aa6.09□□□□□ -1.43
CUX1-219ENST00000606749 KRBOX4Q5JUW0 171 aa6.09□□□□□ -1.43
CUX1-219ENST00000606749 UTF1Q5T230 341 aa6.09□□□□□ -1.43
CUX1-219ENST00000606749 Q6ZPA2 131 aa6.09□□□□□ -1.43
CUX1-219ENST00000606749 C16orf82Q7Z2V1 217 aa6.09□□□□□ -1.43
CUX1-219ENST00000606749 REC114Q7Z4M0 266 aa6.09□□□□□ -1.43
CUX1-219ENST00000606749 CENPVQ7Z7K6 275 aaPredicted RBP6.09□□□□□ -1.43
CUX1-219ENST00000606749 SYS1Q8N2H4 156 aa6.09□□□□□ -1.43
CUX1-219ENST00000606749 CBR4Q8N4T8 237 aa6.09□□□□□ -1.43
CUX1-219ENST00000606749 PARP16Q8N5Y8 322 aa6.09□□□□□ -1.43
CUX1-219ENST00000606749 CHST4Q8NCG5 386 aa6.09□□□□□ -1.43
CUX1-219ENST00000606749 WFDC9Q8NEX5 89 aa6.09□□□□□ -1.43
CUX1-219ENST00000606749 OR4D6Q8NGJ1 314 aa6.09□□□□□ -1.43
CUX1-219ENST00000606749 OR13C9Q8NGT0 318 aa6.09□□□□□ -1.43
CUX1-219ENST00000606749 RHOXF1Q8NHV9 184 aa6.09□□□□□ -1.43
CUX1-219ENST00000606749 CREB3L1Q96BA8 519 aa6.09□□□□□ -1.43
CUX1-219ENST00000606749 MRPL48Q96GC5 212 aaKnown RBP6.09□□□□□ -1.43
CUX1-219ENST00000606749 COQ2Q96H96 371 aa6.09□□□□□ -1.43
CUX1-219ENST00000606749 RBM14Q96PK6 669 aaKnown RBP6.09□□□□□ -1.43
CUX1-219ENST00000606749 MYCBPQ99417 103 aaPredicted RBP6.09□□□□□ -1.43
CUX1-219ENST00000606749 ALG8Q9BVK2 526 aa6.09□□□□□ -1.43
CUX1-219ENST00000606749 LIN7BQ9HAP6 207 aa6.09□□□□□ -1.43
CUX1-219ENST00000606749 ZNF286AQ9HBT8 521 aa6.09□□□□□ -1.43
CUX1-219ENST00000606749 NEK6Q9HC98 313 aa6.09□□□□□ -1.43
CUX1-219ENST00000606749 ING3Q9NXR8 418 aa6.09□□□□□ -1.43
CUX1-219ENST00000606749 PCDHGB5Q9Y5G0 923 aa6.09□□□□□ -1.43
CUX1-219ENST00000606749 GMPPBQ9Y5P6 360 aa6.09□□□□□ -1.43
CUX1-219ENST00000606749 A0A087X0M5 115 aa6.08□□□□□ -1.44
CUX1-219ENST00000606749 KBTBD11-OT1A0A1B0GTJ5 212 aa6.08□□□□□ -1.44
CUX1-219ENST00000606749 A0A1B0GX30 115 aa6.08□□□□□ -1.44
CUX1-219ENST00000606749 A0A1W2PRX2 142 aa6.08□□□□□ -1.44
CUX1-219ENST00000606749 TMEM212A6NML5 194 aa6.08□□□□□ -1.44
CUX1-219ENST00000606749 ZNF729A6NN14 1252 aaPredicted RBP6.08□□□□□ -1.44
CUX1-219ENST00000606749 TOR1AO14656 332 aa6.08□□□□□ -1.44
CUX1-219ENST00000606749 SULT1B1O43704 296 aa6.08□□□□□ -1.44
CUX1-219ENST00000606749 OR2F2O95006 317 aa6.08□□□□□ -1.44
CUX1-219ENST00000606749 FADS2O95864 444 aaKnown RBP6.08□□□□□ -1.44
CUX1-219ENST00000606749 LPLP06858 475 aa6.08□□□□□ -1.44
CUX1-219ENST00000606749 HCKP08631 526 aa6.08□□□□□ -1.44
CUX1-219ENST00000606749 RPSAP08865 295 aaKnown RBP6.08□□□□□ -1.44
CUX1-219ENST00000606749 PTGFRP43088 359 aa6.08□□□□□ -1.44
CUX1-219ENST00000606749 ARHGDIBP52566 201 aa6.08□□□□□ -1.44
CUX1-219ENST00000606749 HLA-DRB5Q30154 266 aa6.08□□□□□ -1.44
CUX1-219ENST00000606749 ABCA11PQ4W5N1 156 aa6.08□□□□□ -1.44
CUX1-219ENST00000606749 TPTE2P1Q5T6R2 138 aa6.08□□□□□ -1.44
CUX1-219ENST00000606749 ZNF691Q5VV52 312 aa6.08□□□□□ -1.44
CUX1-219ENST00000606749 ELP2Q6IA86 826 aa6.08□□□□□ -1.44
CUX1-219ENST00000606749 ZNF529Q6P280 563 aa6.08□□□□□ -1.44
CUX1-219ENST00000606749 ZFP1Q6P2D0 407 aa6.08□□□□□ -1.44
CUX1-219ENST00000606749 ZNF565Q8N9K5 539 aa6.08□□□□□ -1.44
CUX1-219ENST00000606749 OR51T1Q8NGJ9 327 aa6.08□□□□□ -1.44
CUX1-219ENST00000606749 OR5AK2Q8NH90 309 aa6.08□□□□□ -1.44
CUX1-219ENST00000606749 CAPSLQ8WWF8 208 aa6.08□□□□□ -1.44
CUX1-219ENST00000606749 SGCDQ92629 289 aa6.08□□□□□ -1.44
CUX1-219ENST00000606749 AKR1E2Q96JD6 320 aa6.08□□□□□ -1.44
CUX1-219ENST00000606749 Q96MT0 163 aa6.08□□□□□ -1.44
CUX1-219ENST00000606749 NR1H4Q96RI1 486 aaPredicted RBP6.08□□□□□ -1.44
CUX1-219ENST00000606749 SLC29A1Q99808 456 aa6.08□□□□□ -1.44
CUX1-219ENST00000606749 PDCD1LG2Q9BQ51 273 aa6.08□□□□□ -1.44
CUX1-219ENST00000606749 SLC25A33Q9BSK2 321 aa6.08□□□□□ -1.44
CUX1-219ENST00000606749 PPIL3Q9H2H8 161 aaKnown RBP6.08□□□□□ -1.44
CUX1-219ENST00000606749 NCOR1P1Q9H4R4 102 aa6.08□□□□□ -1.44
CUX1-219ENST00000606749 AMBNQ9NP70 447 aa6.08□□□□□ -1.44
CUX1-219ENST00000606749 INPP5EQ9NRR6 644 aa6.08□□□□□ -1.44
CUX1-219ENST00000606749 MRPS18AQ9NVS2 196 aaKnown RBP6.08□□□□□ -1.44
CUX1-219ENST00000606749 NECAP2Q9NVZ3 263 aa6.08□□□□□ -1.44
CUX1-219ENST00000606749 ERVK13-1Q9NX77 482 aa6.08□□□□□ -1.44
CUX1-219ENST00000606749 OR6C3Q9NZP0 311 aa6.08□□□□□ -1.44
CUX1-219ENST00000606749 TRAV24A0A0B4J272 114 aa6.07□□□□□ -1.44
CUX1-219ENST00000606749 LOC100130705A0A1B0GUX0 176 aa6.07□□□□□ -1.44
CUX1-219ENST00000606749 TCRBV4S1A1TA0A5B7 111 aa6.07□□□□□ -1.44
CUX1-219ENST00000606749 FAM90A18PA6NE21 464 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms