RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 XAF1Q6GPH4 301 aa11.53□□□□□ -0.56
LIG1-218ENST00000599322 ELP2Q6IA86 826 aa11.53□□□□□ -0.56
LIG1-218ENST00000599322 ZNF565Q8N9K5 539 aa11.53□□□□□ -0.56
LIG1-218ENST00000599322 OR4D6Q8NGJ1 314 aa11.53□□□□□ -0.56
LIG1-218ENST00000599322 MALSU1Q96EH3 234 aa11.53□□□□□ -0.56
LIG1-218ENST00000599322 MND1Q9BWT6 205 aa11.53□□□□□ -0.56
LIG1-218ENST00000599322 MEGF9Q9H1U4 602 aa11.53□□□□□ -0.56
LIG1-218ENST00000599322 TAS2R3Q9NYW6 316 aa11.53□□□□□ -0.56
LIG1-218ENST00000599322 OR6C3Q9NZP0 311 aa11.53□□□□□ -0.56
LIG1-218ENST00000599322 C1RLQ9NZP8 487 aa11.53□□□□□ -0.56
LIG1-218ENST00000599322 SESN1Q9Y6P5 492 aa11.53□□□□□ -0.56
LIG1-218ENST00000599322 A0A0G2JK05 382 aa11.52□□□□□ -0.57
LIG1-218ENST00000599322 PNMA8CA0A1B0GUJ8 204 aa11.52□□□□□ -0.57
LIG1-218ENST00000599322 H3BUX3 64 aa11.52□□□□□ -0.57
LIG1-218ENST00000599322 GABRPO00591 440 aa11.52□□□□□ -0.57
LIG1-218ENST00000599322 TOR1AO14656 332 aa11.52□□□□□ -0.57
LIG1-218ENST00000599322 RRP9O43818 475 aaKnown RBP11.52□□□□□ -0.57
LIG1-218ENST00000599322 PSPNO60542 156 aa11.52□□□□□ -0.57
LIG1-218ENST00000599322 CLPXO76031 633 aa11.52□□□□□ -0.57
LIG1-218ENST00000599322 OR3A1P47881 315 aa11.52□□□□□ -0.57
LIG1-218ENST00000599322 KCNJ3P48549 501 aa11.52□□□□□ -0.57
LIG1-218ENST00000599322 ZP1P60852 638 aa11.52□□□□□ -0.57
LIG1-218ENST00000599322 AESQ08117 197 aa11.52□□□□□ -0.57
LIG1-218ENST00000599322 IL13RA2Q14627 380 aa11.52□□□□□ -0.57
LIG1-218ENST00000599322 C6orf141Q5SZD1 244 aa11.52□□□□□ -0.57
LIG1-218ENST00000599322 TPRX1Q8N7U7 411 aa11.52□□□□□ -0.57
LIG1-218ENST00000599322 ZFP41Q8N8Y5 198 aa11.52□□□□□ -0.57
LIG1-218ENST00000599322 NDNFQ8TB73 568 aa11.52□□□□□ -0.57
LIG1-218ENST00000599322 RPS4Y2Q8TD47 263 aa11.52□□□□□ -0.57
LIG1-218ENST00000599322 CLEC7AQ9BXN2 247 aa11.52□□□□□ -0.57
LIG1-218ENST00000599322 PPA2Q9H2U2 334 aa11.52□□□□□ -0.57
LIG1-218ENST00000599322 ING3Q9NXR8 418 aa11.52□□□□□ -0.57
LIG1-218ENST00000599322 PITPNC1Q9UKF7 332 aa11.52□□□□□ -0.57
LIG1-218ENST00000599322 MEX3AA1L020 520 aaKnown RBP11.51□□□□□ -0.57
LIG1-218ENST00000599322 CSN2P05814 226 aa11.51□□□□□ -0.57
LIG1-218ENST00000599322 CD1AP06126 327 aa11.51□□□□□ -0.57
LIG1-218ENST00000599322 CDK1P06493 297 aa11.51□□□□□ -0.57
LIG1-218ENST00000599322 C21orf33P30042 268 aaPredicted RBP11.51□□□□□ -0.57
LIG1-218ENST00000599322 BDH1Q02338 343 aa11.51□□□□□ -0.57
LIG1-218ENST00000599322 FAM189A2Q15884 450 aa11.51□□□□□ -0.57
LIG1-218ENST00000599322 TAF9Q16594 264 aa11.51□□□□□ -0.57
LIG1-218ENST00000599322 MINOS1Q5TGZ0 78 aa11.51□□□□□ -0.57
LIG1-218ENST00000599322 HCP5Q6MZN7 132 aa11.51□□□□□ -0.57
LIG1-218ENST00000599322 ZNF529Q6P280 563 aa11.51□□□□□ -0.57
LIG1-218ENST00000599322 LIAT1Q6ZQX7 453 aa11.51□□□□□ -0.57
LIG1-218ENST00000599322 LINC00596Q86U02 117 aa11.51□□□□□ -0.57
LIG1-218ENST00000599322 RTN4RL2Q86UN3 420 aa11.51□□□□□ -0.57
LIG1-218ENST00000599322 OSR2Q8N2R0 312 aa11.51□□□□□ -0.57
LIG1-218ENST00000599322 JAGN1Q8N5M9 183 aa11.51□□□□□ -0.57
LIG1-218ENST00000599322 C11orf42Q8N5U0 333 aa11.51□□□□□ -0.57
LIG1-218ENST00000599322 MS4A15Q8N5U1 240 aa11.51□□□□□ -0.57
LIG1-218ENST00000599322 NANOGP1Q8N7R0 232 aa11.51□□□□□ -0.57
LIG1-218ENST00000599322 OR11H6Q8NGC7 330 aa11.51□□□□□ -0.57
LIG1-218ENST00000599322 OR51A2Q8NGJ7 313 aa11.51□□□□□ -0.57
LIG1-218ENST00000599322 ZNF596Q8TC21 504 aa11.51□□□□□ -0.57
LIG1-218ENST00000599322 FBLIM1Q8WUP2 373 aa11.51□□□□□ -0.57
LIG1-218ENST00000599322 RGP1Q92546 391 aaPredicted RBP11.51□□□□□ -0.57
LIG1-218ENST00000599322 CREB3L1Q96BA8 519 aa11.51□□□□□ -0.57
LIG1-218ENST00000599322 ZNF184Q99676 751 aaPredicted RBP11.51□□□□□ -0.57
LIG1-218ENST00000599322 TMEM133Q9H2Q1 129 aa11.51□□□□□ -0.57
LIG1-218ENST00000599322 NKX1-2Q9UD57 310 aaPredicted RBP11.51□□□□□ -0.57
LIG1-218ENST00000599322 FOXJ3Q9UPW0 622 aa11.51□□□□□ -0.57
LIG1-218ENST00000599322 RNF114Q9Y508 228 aa11.51□□□□□ -0.57
LIG1-218ENST00000599322 SIRT4Q9Y6E7 314 aaPredicted RBP11.51□□□□□ -0.57
LIG1-218ENST00000599322 MINOS1-NBL1R4GNA1 71 aa11.51□□□□□ -0.57
LIG1-218ENST00000599322 TRBV5-5A0A0J9YX44 114 aa11.5□□□□□ -0.57
LIG1-218ENST00000599322 ODAMA1E959 279 aa11.5□□□□□ -0.57
LIG1-218ENST00000599322 MEGF11A6BM72 1044 aa11.5□□□□□ -0.57
LIG1-218ENST00000599322 SLC33A1O00400 549 aaPredicted RBP11.5□□□□□ -0.57
LIG1-218ENST00000599322 GPX5O75715 221 aa11.5□□□□□ -0.57
LIG1-218ENST00000599322 LALBAP00709 142 aa11.5□□□□□ -0.57
LIG1-218ENST00000599322 GTF2F2P13984 249 aa11.5□□□□□ -0.57
LIG1-218ENST00000599322 CEACAM3P40198 252 aa11.5□□□□□ -0.57
LIG1-218ENST00000599322 PRRX1P54821 245 aa11.5□□□□□ -0.57
LIG1-218ENST00000599322 DLX6P56179 175 aa11.5□□□□□ -0.57
LIG1-218ENST00000599322 LY6EQ16553 131 aa11.5□□□□□ -0.57
LIG1-218ENST00000599322 ZNF626Q68DY1 528 aa11.5□□□□□ -0.57
LIG1-218ENST00000599322 CDH26Q8IXH8 852 aa11.5□□□□□ -0.57
LIG1-218ENST00000599322 OR51T1Q8NGJ9 327 aa11.5□□□□□ -0.57
LIG1-218ENST00000599322 OR4C13Q8NGP0 309 aa11.5□□□□□ -0.57
LIG1-218ENST00000599322 OR10K1Q8NGX5 313 aa11.5□□□□□ -0.57
LIG1-218ENST00000599322 NEK7Q8TDX7 302 aa11.5□□□□□ -0.57
LIG1-218ENST00000599322 CAPSLQ8WWF8 208 aa11.5□□□□□ -0.57
LIG1-218ENST00000599322 CORO2AQ92828 525 aa11.5□□□□□ -0.57
LIG1-218ENST00000599322 TCF7L1Q9HCS4 588 aa11.5□□□□□ -0.57
LIG1-218ENST00000599322 IL36GQ9NZH8 169 aa11.5□□□□□ -0.57
LIG1-218ENST00000599322 ST3GAL6Q9Y274 331 aa11.5□□□□□ -0.57
LIG1-218ENST00000599322 MEIKINA0A087WXM9 373 aa11.49□□□□□ -0.57
LIG1-218ENST00000599322 ZNF729A6NN14 1252 aaPredicted RBP11.49□□□□□ -0.57
LIG1-218ENST00000599322 HSPB6O14558 160 aa11.49□□□□□ -0.57
LIG1-218ENST00000599322 OR7C1O76099 320 aaPredicted RBP11.49□□□□□ -0.57
LIG1-218ENST00000599322 CDRT1O95170 752 aa11.49□□□□□ -0.57
LIG1-218ENST00000599322 FSTP19883 344 aa11.49□□□□□ -0.57
LIG1-218ENST00000599322 SERPINA2P20848 420 aa11.49□□□□□ -0.57
LIG1-218ENST00000599322 CDK2P24941 298 aa11.49□□□□□ -0.57
LIG1-218ENST00000599322 HTR1DP28221 377 aa11.49□□□□□ -0.57
LIG1-218ENST00000599322 OR3A4PP47883 348 aa11.49□□□□□ -0.57
LIG1-218ENST00000599322 GLIPR1P48060 266 aa11.49□□□□□ -0.57
LIG1-218ENST00000599322 AQP4P55087 323 aa11.49□□□□□ -0.57
LIG1-218ENST00000599322 DOC2BQ14184 412 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms