RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, human

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IRF3-223	ENST00000599223	TBX5	Q99593	518 aa		11.79	□□□□□ -0.52
IRF3-223	ENST00000599223	BCL7B	Q9BQE9	202 aa		11.79	□□□□□ -0.52
IRF3-223	ENST00000599223	CEPT1	Q9Y6K0	416 aa		11.79	□□□□□ -0.52
IRF3-223	ENST00000599223	DAPL1	A0PJW8	107 aa		11.78	□□□□□ -0.52
IRF3-223	ENST00000599223	MMP23A	O75900	390 aa		11.78	□□□□□ -0.52
IRF3-223	ENST00000599223	WNT4	P56705	351 aa		11.78	□□□□□ -0.52
IRF3-223	ENST00000599223	ACTA2	P62736	377 aa		11.78	□□□□□ -0.52
IRF3-223	ENST00000599223	ACTG2	P63267	376 aa		11.78	□□□□□ -0.52
IRF3-223	ENST00000599223	DYNC1I2	Q13409	638 aa	Known RBP	11.78	□□□□□ -0.52
IRF3-223	ENST00000599223	SPHAR	Q15513	63 aa		11.78	□□□□□ -0.52
IRF3-223	ENST00000599223	TIMM50	Q3ZCQ8	353 aa		11.78	□□□□□ -0.52
IRF3-223	ENST00000599223	BAIAP2L2	Q6UXY1	529 aa		11.78	□□□□□ -0.52
IRF3-223	ENST00000599223	REC114	Q7Z4M0	266 aa		11.78	□□□□□ -0.52
IRF3-223	ENST00000599223	CATSPERD	Q86XM0	798 aa		11.78	□□□□□ -0.52
IRF3-223	ENST00000599223	NANOGP1	Q8N7R0	232 aa		11.78	□□□□□ -0.52
IRF3-223	ENST00000599223	OR10H4	Q8NGA5	316 aa		11.78	□□□□□ -0.52
IRF3-223	ENST00000599223	OR52N4	Q8NGI2	321 aa		11.78	□□□□□ -0.52
IRF3-223	ENST00000599223	OR13D1	Q8NGV5	346 aa		11.78	□□□□□ -0.52
IRF3-223	ENST00000599223	ISOC1	Q96CN7	298 aa		11.78	□□□□□ -0.52
IRF3-223	ENST00000599223	MALSU1	Q96EH3	234 aa		11.78	□□□□□ -0.52
IRF3-223	ENST00000599223	CEP19	Q96LK0	163 aa		11.78	□□□□□ -0.52
IRF3-223	ENST00000599223	ZNF714	Q96N38	554 aa		11.78	□□□□□ -0.52
IRF3-223	ENST00000599223	JAM3	Q9BX67	310 aa		11.78	□□□□□ -0.52
IRF3-223	ENST00000599223	CHST6	Q9GZX3	395 aa		11.78	□□□□□ -0.52
IRF3-223	ENST00000599223	RBM38	Q9H0Z9	239 aa	Known RBP	11.78	□□□□□ -0.52
IRF3-223	ENST00000599223	ABCB10	Q9NRK6	738 aa		11.78	□□□□□ -0.52
IRF3-223	ENST00000599223	HILPDA	Q9Y5L2	63 aa		11.78	□□□□□ -0.52
IRF3-223	ENST00000599223	NBEAL2	Q6ZNJ1	2754 aa		11.77	□□□□□ -0.53
IRF3-223	ENST00000599223	IGHV2-26	A0A0B4J1V2	119 aa		11.77	□□□□□ -0.53
IRF3-223	ENST00000599223		A0A1W2PRX2	142 aa		11.77	□□□□□ -0.53
IRF3-223	ENST00000599223	ZNF670-ZNF695	F2Z2N8	137 aa		11.77	□□□□□ -0.53
IRF3-223	ENST00000599223	F2RL2	O00254	374 aa		11.77	□□□□□ -0.53
IRF3-223	ENST00000599223	PSPN	O60542	156 aa		11.77	□□□□□ -0.53
IRF3-223	ENST00000599223	DYNLT3	P51808	116 aa		11.77	□□□□□ -0.53
IRF3-223	ENST00000599223	GP2	P55259	537 aa	Known RBP	11.77	□□□□□ -0.53
IRF3-223	ENST00000599223	CNPY1	Q3B7I2	92 aa		11.77	□□□□□ -0.53
IRF3-223	ENST00000599223	FOXB2	Q5VYV0	432 aa		11.77	□□□□□ -0.53
IRF3-223	ENST00000599223	SLC25A26	Q70HW3	274 aa		11.77	□□□□□ -0.53
IRF3-223	ENST00000599223	GDPD3	Q7L5L3	318 aa		11.77	□□□□□ -0.53
IRF3-223	ENST00000599223	OR4S1	Q8NGB4	309 aa		11.77	□□□□□ -0.53
IRF3-223	ENST00000599223	OR52N1	Q8NH53	320 aa		11.77	□□□□□ -0.53
IRF3-223	ENST00000599223	RNF166	Q96A37	237 aa	Predicted RBP	11.77	□□□□□ -0.53
IRF3-223	ENST00000599223	MGLL	Q99685	303 aa		11.77	□□□□□ -0.53
IRF3-223	ENST00000599223	PRSS22	Q9GZN4	317 aa		11.77	□□□□□ -0.53
IRF3-223	ENST00000599223	CHST5	Q9GZS9	411 aa		11.77	□□□□□ -0.53
IRF3-223	ENST00000599223	PLEKHA1	Q9HB21	404 aa		11.77	□□□□□ -0.53
IRF3-223	ENST00000599223	NECAP2	Q9NVZ3	263 aa		11.77	□□□□□ -0.53
IRF3-223	ENST00000599223	RBFOX1	Q9NWB1	397 aa	Known RBP	11.77	□□□□□ -0.53
IRF3-223	ENST00000599223		A0A1W2PQL4	384 aa	Predicted RBP	11.76	□□□□□ -0.53
IRF3-223	ENST00000599223	CCRL2	O00421	344 aa		11.76	□□□□□ -0.53
IRF3-223	ENST00000599223	HAND1	O96004	215 aa		11.76	□□□□□ -0.53
IRF3-223	ENST00000599223	CHRM2	P08172	466 aa		11.76	□□□□□ -0.53
IRF3-223	ENST00000599223	OR2T7	P0C7T2	308 aa		11.76	□□□□□ -0.53
IRF3-223	ENST00000599223	CALCB	P10092	127 aa		11.76	□□□□□ -0.53
IRF3-223	ENST00000599223	CD36	P16671	472 aa		11.76	□□□□□ -0.53
IRF3-223	ENST00000599223	DUSP1	P28562	367 aa		11.76	□□□□□ -0.53
IRF3-223	ENST00000599223	VDAC2	P45880	294 aa	Predicted RBP	11.76	□□□□□ -0.53
IRF3-223	ENST00000599223	NPBWR2	P48146	333 aa		11.76	□□□□□ -0.53
IRF3-223	ENST00000599223	ETV1	P50549	477 aa		11.76	□□□□□ -0.53
IRF3-223	ENST00000599223	MLLT11	Q13015	90 aa	Predicted RBP	11.76	□□□□□ -0.53
IRF3-223	ENST00000599223	TCTEX1D4	Q5JR98	221 aa		11.76	□□□□□ -0.53
IRF3-223	ENST00000599223	ANKRD13B	Q86YJ7	626 aa		11.76	□□□□□ -0.53
IRF3-223	ENST00000599223	PRSS35	Q8N3Z0	413 aa		11.76	□□□□□ -0.53
IRF3-223	ENST00000599223	YIPF7	Q8N8F6	280 aa		11.76	□□□□□ -0.53
IRF3-223	ENST00000599223	OR4F17	Q8NGA8	305 aa		11.76	□□□□□ -0.53
IRF3-223	ENST00000599223	OR4P4	Q8NGL7	312 aa		11.76	□□□□□ -0.53
IRF3-223	ENST00000599223	EMG1	Q92979	244 aa	Known RBP	11.76	□□□□□ -0.53
IRF3-223	ENST00000599223	OR4F4	Q96R69	305 aa		11.76	□□□□□ -0.53
IRF3-223	ENST00000599223	MNT	Q99583	582 aa		11.76	□□□□□ -0.53
IRF3-223	ENST00000599223	OCSTAMP	Q9BR26	566 aa		11.76	□□□□□ -0.53
IRF3-223	ENST00000599223	FUNDC2	Q9BWH2	189 aa		11.76	□□□□□ -0.53
IRF3-223	ENST00000599223	ISYNA1	Q9NPH2	558 aa		11.76	□□□□□ -0.53
IRF3-223	ENST00000599223	ERVK13-1	Q9NX77	482 aa		11.76	□□□□□ -0.53
IRF3-223	ENST00000599223	ZNF281	Q9Y2X9	895 aa		11.76	□□□□□ -0.53
IRF3-223	ENST00000599223	SESN1	Q9Y6P5	492 aa		11.76	□□□□□ -0.53
IRF3-223	ENST00000599223	IGKV1-9	A0A0C4DH69	117 aa		11.75	□□□□□ -0.53
IRF3-223	ENST00000599223	LOC107986453	A0A1B0GWG9	222 aa		11.75	□□□□□ -0.53
IRF3-223	ENST00000599223	FAM90A22P	A8MWA6	464 aa		11.75	□□□□□ -0.53
IRF3-223	ENST00000599223	SYT7	O43581	403 aa		11.75	□□□□□ -0.53
IRF3-223	ENST00000599223	ALX3	O95076	343 aa		11.75	□□□□□ -0.53
IRF3-223	ENST00000599223	KRT8	P05787	483 aa		11.75	□□□□□ -0.53
IRF3-223	ENST00000599223	BCL3	P20749	454 aa		11.75	□□□□□ -0.53
IRF3-223	ENST00000599223	CD24	P25063	80 aa		11.75	□□□□□ -0.53
IRF3-223	ENST00000599223	KIR3DL2	P43630	455 aa		11.75	□□□□□ -0.53
IRF3-223	ENST00000599223	OR3A1	P47881	315 aa		11.75	□□□□□ -0.53
IRF3-223	ENST00000599223	SNU13	P55769	128 aa	Known RBP	11.75	□□□□□ -0.53
IRF3-223	ENST00000599223	LOXL3	P58215	753 aa		11.75	□□□□□ -0.53
IRF3-223	ENST00000599223	MEF2C	Q06413	473 aa	Predicted RBP	11.75	□□□□□ -0.53
IRF3-223	ENST00000599223	GALE	Q14376	348 aa		11.75	□□□□□ -0.53
IRF3-223	ENST00000599223	GRK1	Q15835	563 aa		11.75	□□□□□ -0.53
IRF3-223	ENST00000599223	LHFPL3	Q86UP9	236 aa		11.75	□□□□□ -0.53
IRF3-223	ENST00000599223	ZNF676	Q8N7Q3	588 aa		11.75	□□□□□ -0.53
IRF3-223	ENST00000599223	UFD1	Q92890	307 aa		11.75	□□□□□ -0.53
IRF3-223	ENST00000599223	SNX22	Q96L94	193 aa		11.75	□□□□□ -0.53
IRF3-223	ENST00000599223	ALG8	Q9BVK2	526 aa		11.75	□□□□□ -0.53
IRF3-223	ENST00000599223	PTTG2	Q9NZH5	202 aa		11.75	□□□□□ -0.53
IRF3-223	ENST00000599223	CLEC2D	Q9UHP7	191 aa		11.75	□□□□□ -0.53
IRF3-223	ENST00000599223	PITPNC1	Q9UKF7	332 aa		11.75	□□□□□ -0.53
IRF3-223	ENST00000599223	SLC7A11	Q9UPY5	501 aa		11.75	□□□□□ -0.53
IRF3-223	ENST00000599223	LINC00312	Q9Y6C7	94 aa		11.75	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms