RNA–Protein interactions for RNA: ENST00000598938.1

LIG1-216, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-216ENST00000598938 CRTAPO75718 401 aaPredicted RBP15□□□□□ -0.01
LIG1-216ENST00000598938 LIPFP07098 398 aa15□□□□□ -0.01
LIG1-216ENST00000598938 VSIG8P0DPA2 414 aa15□□□□□ -0.01
LIG1-216ENST00000598938 MGMTP16455 207 aa15□□□□□ -0.01
LIG1-216ENST00000598938 SDC2P34741 201 aa15□□□□□ -0.01
LIG1-216ENST00000598938 OR3A1P47881 315 aa15□□□□□ -0.01
LIG1-216ENST00000598938 QRFPP83859 136 aa15□□□□□ -0.01
LIG1-216ENST00000598938 SCN1BQ07699 218 aa15□□□□□ -0.01
LIG1-216ENST00000598938 PDCD1Q15116 288 aa15□□□□□ -0.01
LIG1-216ENST00000598938 P2RY14Q15391 338 aa15□□□□□ -0.01
LIG1-216ENST00000598938 OR4S1Q8NGB4 309 aa15□□□□□ -0.01
LIG1-216ENST00000598938 Q96M66 194 aa15□□□□□ -0.01
LIG1-216ENST00000598938 BANF2Q9H503 90 aa15□□□□□ -0.01
LIG1-216ENST00000598938 STEAP1Q9UHE8 339 aa15□□□□□ -0.01
LIG1-216ENST00000598938 OPN4Q9UHM6 478 aa15□□□□□ -0.01
LIG1-216ENST00000598938 TRAV24A0A0B4J272 114 aa14.99□□□□□ -0.01
LIG1-216ENST00000598938 TMEM14DPA8MWL7 114 aa14.99□□□□□ -0.01
LIG1-216ENST00000598938 AIPO00170 330 aa14.99□□□□□ -0.01
LIG1-216ENST00000598938 MGST3O14880 152 aa14.99□□□□□ -0.01
LIG1-216ENST00000598938 AVPP01185 164 aa14.99□□□□□ -0.01
LIG1-216ENST00000598938 PPIAL4GP0DN37 164 aa14.99□□□□□ -0.01
LIG1-216ENST00000598938 RANBP1P43487 201 aa14.99□□□□□ -0.01
LIG1-216ENST00000598938 GRK1Q15835 563 aa14.99□□□□□ -0.01
LIG1-216ENST00000598938 MPV17LQ2QL34 196 aa14.99□□□□□ -0.01
LIG1-216ENST00000598938 FAM120AOSQ5T036 256 aa14.99□□□□□ -0.01
LIG1-216ENST00000598938 HES5Q5TA89 166 aa14.99□□□□□ -0.01
LIG1-216ENST00000598938 OR10K2Q6IF99 312 aa14.99□□□□□ -0.01
LIG1-216ENST00000598938 KCNG3Q8TAE7 436 aa14.99□□□□□ -0.01
LIG1-216ENST00000598938 PPP1R35Q8TAP8 253 aa14.99□□□□□ -0.01
LIG1-216ENST00000598938 SELENOIQ9C0D9 397 aa14.99□□□□□ -0.01
LIG1-216ENST00000598938 CHST6Q9GZX3 395 aa14.99□□□□□ -0.01
LIG1-216ENST00000598938 KCNK15Q9H427 330 aa14.99□□□□□ -0.01
LIG1-216ENST00000598938 C7orf69Q9H7B7 122 aa14.99□□□□□ -0.01
LIG1-216ENST00000598938 ZNF581Q9P0T4 197 aa14.99□□□□□ -0.01
LIG1-216ENST00000598938 DOCK11Q5JSL3 2073 aa14.98□□□□□ -0.01
LIG1-216ENST00000598938 SMIM30A4D0T7 59 aa14.98□□□□□ -0.01
LIG1-216ENST00000598938 FAM90A10PA6NDY2 464 aa14.98□□□□□ -0.01
LIG1-216ENST00000598938 FAM90A18PA6NE21 464 aa14.98□□□□□ -0.01
LIG1-216ENST00000598938 FAM90A16PA6NEW6 464 aa14.98□□□□□ -0.01
LIG1-216ENST00000598938 FAM90A20PA6NIJ5 464 aa14.98□□□□□ -0.01
LIG1-216ENST00000598938 FAM90A8PA6NJQ4 464 aa14.98□□□□□ -0.01
LIG1-216ENST00000598938 FAM90A7PA6NKC0 464 aa14.98□□□□□ -0.01
LIG1-216ENST00000598938 NOTOA8MTQ0 251 aa14.98□□□□□ -0.01
LIG1-216ENST00000598938 FAM90A22PA8MWA6 464 aa14.98□□□□□ -0.01
LIG1-216ENST00000598938 FAM90A12PA8MX19 464 aa14.98□□□□□ -0.01
LIG1-216ENST00000598938 FAM90A5PA8MXJ8 464 aa14.98□□□□□ -0.01
LIG1-216ENST00000598938 FAM90A23PA8MXZ1 464 aa14.98□□□□□ -0.01
LIG1-216ENST00000598938 MPIG6BO95866 241 aa14.98□□□□□ -0.01
LIG1-216ENST00000598938 CSN2P05814 226 aa14.98□□□□□ -0.01
LIG1-216ENST00000598938 FAM90A15PP0C7V4 464 aa14.98□□□□□ -0.01
LIG1-216ENST00000598938 FAM90A13PP0C7W8 464 aa14.98□□□□□ -0.01
LIG1-216ENST00000598938 FAM90A14PP0C7W9 464 aa14.98□□□□□ -0.01
LIG1-216ENST00000598938 FAM90A24PP0C7X0 464 aa14.98□□□□□ -0.01
LIG1-216ENST00000598938 ARSBP15848 533 aa14.98□□□□□ -0.01
LIG1-216ENST00000598938 HNF1AP20823 631 aa14.98□□□□□ -0.01
LIG1-216ENST00000598938 CLDN12P56749 244 aa14.98□□□□□ -0.01
LIG1-216ENST00000598938 UNC119Q13432 240 aa14.98□□□□□ -0.01
LIG1-216ENST00000598938 TAF9Q16594 264 aa14.98□□□□□ -0.01
LIG1-216ENST00000598938 C1orf229Q6ZS94 237 aaPredicted RBP14.98□□□□□ -0.01
LIG1-216ENST00000598938 GDPD3Q7L5L3 318 aa14.98□□□□□ -0.01
LIG1-216ENST00000598938 OR2W3Q7Z3T1 314 aa14.98□□□□□ -0.01
LIG1-216ENST00000598938 OR51D1Q8NGF3 324 aa14.98□□□□□ -0.01
LIG1-216ENST00000598938 FAM46BQ96A09 425 aa14.98□□□□□ -0.01
LIG1-216ENST00000598938 FAM3DQ96BQ1 224 aa14.98□□□□□ -0.01
LIG1-216ENST00000598938 MRI1Q9BV20 369 aa14.98□□□□□ -0.01
LIG1-216ENST00000598938 C19orf12Q9NSK7 152 aa14.98□□□□□ -0.01
LIG1-216ENST00000598938 FBLN5Q9UBX5 448 aa14.98□□□□□ -0.01
LIG1-216ENST00000598938 AUP1Q9Y679 476 aa14.98□□□□□ -0.01
LIG1-216ENST00000598938 LDLRAD4O15165 306 aa14.97□□□□□ -0.01
LIG1-216ENST00000598938 OR7C1O76099 320 aaPredicted RBP14.97□□□□□ -0.01
LIG1-216ENST00000598938 CLEC2LP0C7M8 214 aa14.97□□□□□ -0.01
LIG1-216ENST00000598938 ERP29P30040 261 aaKnown RBP14.97□□□□□ -0.01
LIG1-216ENST00000598938 TGFBR1P36897 503 aa14.97□□□□□ -0.01
LIG1-216ENST00000598938 LSM3P62310 102 aaKnown RBP14.97□□□□□ -0.01
LIG1-216ENST00000598938 RPL31P62899 125 aaKnown RBP14.97□□□□□ -0.01
LIG1-216ENST00000598938 RPS27AP62979 156 aaKnown RBP14.97□□□□□ -0.01
LIG1-216ENST00000598938 SLC16A12Q6ZSM3 486 aa14.97□□□□□ -0.01
LIG1-216ENST00000598938 GPR141Q7Z602 305 aa14.97□□□□□ -0.01
LIG1-216ENST00000598938 ANKRD13BQ86YJ7 626 aa14.97□□□□□ -0.01
LIG1-216ENST00000598938 KIR3DL3Q8N743 410 aa14.97□□□□□ -0.01
LIG1-216ENST00000598938 OR4M1Q8NGD0 313 aa14.97□□□□□ -0.01
LIG1-216ENST00000598938 TMEM59Q9BXS4 323 aa14.97□□□□□ -0.01
LIG1-216ENST00000598938 PPA2Q9H2U2 334 aa14.97□□□□□ -0.01
LIG1-216ENST00000598938 RCC2Q9P258 522 aaKnown RBP14.97□□□□□ -0.01
LIG1-216ENST00000598938 A0A1W2PQ09 198 aa14.96□□□□□ -0.01
LIG1-216ENST00000598938 GABARAPO95166 117 aa14.96□□□□□ -0.01
LIG1-216ENST00000598938 MMP9P14780 707 aa14.96□□□□□ -0.01
LIG1-216ENST00000598938 RPL5P46777 297 aaKnown RBP14.96□□□□□ -0.01
LIG1-216ENST00000598938 EDDM3BP56851 147 aa14.96□□□□□ -0.01
LIG1-216ENST00000598938 MXD1Q05195 221 aa14.96□□□□□ -0.01
LIG1-216ENST00000598938 EDDM3AQ14507 147 aa14.96□□□□□ -0.01
LIG1-216ENST00000598938 C2orf76Q3KRA6 126 aa14.96□□□□□ -0.01
LIG1-216ENST00000598938 PAN3Q58A45 887 aaKnown RBP14.96□□□□□ -0.01
LIG1-216ENST00000598938 IL17RELQ6ZVW7 336 aa14.96□□□□□ -0.01
LIG1-216ENST00000598938 FAM185AQ8N0U4 392 aa14.96□□□□□ -0.01
LIG1-216ENST00000598938 SUMF2Q8NBJ7 301 aa14.96□□□□□ -0.01
LIG1-216ENST00000598938 TM2D1Q9BX74 207 aa14.96□□□□□ -0.01
LIG1-216ENST00000598938 SIRPDQ9H106 197 aa14.96□□□□□ -0.01
LIG1-216ENST00000598938 KPTNQ9Y664 436 aa14.96□□□□□ -0.01
LIG1-216ENST00000598938 HSPB6O14558 160 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms