RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 ZNF181Q2M3W8 571 aa11.41□□□□□ -0.58
SHKBP1-218ENST00000598907 HAGHLQ6PII5 290 aaPredicted RBP11.41□□□□□ -0.58
SHKBP1-218ENST00000598907 WDR82Q6UXN9 313 aa11.41□□□□□ -0.58
SHKBP1-218ENST00000598907 LRRC28Q86X40 367 aaPredicted RBP11.41□□□□□ -0.58
SHKBP1-218ENST00000598907 PNLDC1Q8NA58 520 aaKnown RBP11.41□□□□□ -0.58
SHKBP1-218ENST00000598907 Q8NFD4 153 aa11.41□□□□□ -0.58
SHKBP1-218ENST00000598907 GPER1Q99527 375 aa11.41□□□□□ -0.58
SHKBP1-218ENST00000598907 NUDT16L1Q9BRJ7 211 aaKnown RBP11.41□□□□□ -0.58
SHKBP1-218ENST00000598907 C16orf95Q9H693 158 aa11.41□□□□□ -0.58
SHKBP1-218ENST00000598907 MTCH1Q9NZJ7 389 aa11.41□□□□□ -0.58
SHKBP1-218ENST00000598907 CCDC59Q9P031 241 aaKnown RBP11.41□□□□□ -0.58
SHKBP1-218ENST00000598907 STEAP1Q9UHE8 339 aa11.41□□□□□ -0.58
SHKBP1-218ENST00000598907 IGHV3-64DA0A0J9YX35 117 aa11.4□□□□□ -0.58
SHKBP1-218ENST00000598907 SYNGR1O43759 233 aa11.4□□□□□ -0.58
SHKBP1-218ENST00000598907 RHBDL1O75783 438 aa11.4□□□□□ -0.58
SHKBP1-218ENST00000598907 KDM4BO94953 1096 aa11.4□□□□□ -0.58
SHKBP1-218ENST00000598907 ZNF205O95201 554 aa11.4□□□□□ -0.58
SHKBP1-218ENST00000598907 LHBP01229 141 aa11.4□□□□□ -0.58
SHKBP1-218ENST00000598907 ZNF182P17025 639 aaPredicted RBP11.4□□□□□ -0.58
SHKBP1-218ENST00000598907 MDH2P40926 338 aaKnown RBP11.4□□□□□ -0.58
SHKBP1-218ENST00000598907 ERVK11-1P61568 191 aa11.4□□□□□ -0.58
SHKBP1-218ENST00000598907 QRFPP83859 136 aa11.4□□□□□ -0.58
SHKBP1-218ENST00000598907 RAB11BQ15907 218 aa11.4□□□□□ -0.58
SHKBP1-218ENST00000598907 HES5Q5TA89 166 aa11.4□□□□□ -0.58
SHKBP1-218ENST00000598907 ZNF826PQ6ZT77 177 aa11.4□□□□□ -0.58
SHKBP1-218ENST00000598907 SLC25A26Q70HW3 274 aa11.4□□□□□ -0.58
SHKBP1-218ENST00000598907 MOGAT3Q86VF5 341 aa11.4□□□□□ -0.58
SHKBP1-218ENST00000598907 MKXQ8IYA7 352 aa11.4□□□□□ -0.58
SHKBP1-218ENST00000598907 OR5D18Q8NGL1 313 aa11.4□□□□□ -0.58
SHKBP1-218ENST00000598907 OR10Z1Q8NGY1 313 aa11.4□□□□□ -0.58
SHKBP1-218ENST00000598907 TNFAIP8L1Q8WVP5 186 aa11.4□□□□□ -0.58
SHKBP1-218ENST00000598907 SLIRPQ9GZT3 109 aaKnown RBP11.4□□□□□ -0.58
SHKBP1-218ENST00000598907 FN3KRPQ9HA64 309 aa11.4□□□□□ -0.58
SHKBP1-218ENST00000598907 PLGRKTQ9HBL7 147 aa11.4□□□□□ -0.58
SHKBP1-218ENST00000598907 C1orf123Q9NWV4 160 aa11.4□□□□□ -0.58
SHKBP1-218ENST00000598907 IL36GQ9NZH8 169 aa11.4□□□□□ -0.58
SHKBP1-218ENST00000598907 GHRLQ9UBU3 117 aa11.4□□□□□ -0.58
SHKBP1-218ENST00000598907 FBLN5Q9UBX5 448 aa11.4□□□□□ -0.58
SHKBP1-218ENST00000598907 DAPK2Q9UIK4 370 aa11.4□□□□□ -0.58
SHKBP1-218ENST00000598907 MRPS28Q9Y2Q9 187 aaKnown RBP11.4□□□□□ -0.58
SHKBP1-218ENST00000598907 DOCK11Q5JSL3 2073 aa11.39□□□□□ -0.59
SHKBP1-218ENST00000598907 TNFRSF13BO14836 293 aaPredicted RBP11.39□□□□□ -0.59
SHKBP1-218ENST00000598907 LDLRAD4O15165 306 aa11.39□□□□□ -0.59
SHKBP1-218ENST00000598907 ANGPTL7O43827 346 aa11.39□□□□□ -0.59
SHKBP1-218ENST00000598907 WNT2P09544 360 aa11.39□□□□□ -0.59
SHKBP1-218ENST00000598907 UBBP0CG47 229 aa11.39□□□□□ -0.59
SHKBP1-218ENST00000598907 PGA5P0DJD9 388 aa11.39□□□□□ -0.59
SHKBP1-218ENST00000598907 TMEM225BP0DP42 221 aa11.39□□□□□ -0.59
SHKBP1-218ENST00000598907 CALCBP10092 127 aa11.39□□□□□ -0.59
SHKBP1-218ENST00000598907 RANBP1P43487 201 aa11.39□□□□□ -0.59
SHKBP1-218ENST00000598907 POU3F4P49335 361 aa11.39□□□□□ -0.59
SHKBP1-218ENST00000598907 SCAND1P57086 179 aa11.39□□□□□ -0.59
SHKBP1-218ENST00000598907 DYNC1I2Q13409 638 aaKnown RBP11.39□□□□□ -0.59
SHKBP1-218ENST00000598907 NSUN5P1Q3KNT7 163 aa11.39□□□□□ -0.59
SHKBP1-218ENST00000598907 ELP2Q6IA86 826 aa11.39□□□□□ -0.59
SHKBP1-218ENST00000598907 GLIPR1L1Q6UWM5 242 aa11.39□□□□□ -0.59
SHKBP1-218ENST00000598907 MUC20Q8N307 709 aaPredicted RBP11.39□□□□□ -0.59
SHKBP1-218ENST00000598907 POC1AQ8NBT0 407 aa11.39□□□□□ -0.59
SHKBP1-218ENST00000598907 ZNF671Q8TAW3 534 aa11.39□□□□□ -0.59
SHKBP1-218ENST00000598907 DACT3Q96B18 629 aaPredicted RBP11.39□□□□□ -0.59
SHKBP1-218ENST00000598907 KCTD12Q96CX2 325 aaKnown RBP11.39□□□□□ -0.59
SHKBP1-218ENST00000598907 NRIP2Q9BQI9 281 aa11.39□□□□□ -0.59
SHKBP1-218ENST00000598907 NXF2Q9GZY0 626 aaKnown RBP11.39□□□□□ -0.59
SHKBP1-218ENST00000598907 RHOFQ9HBH0 211 aa11.39□□□□□ -0.59
SHKBP1-218ENST00000598907 HES4Q9HCC6 221 aa11.39□□□□□ -0.59
SHKBP1-218ENST00000598907 TENM2Q9NT68 2774 aa11.39□□□□□ -0.59
SHKBP1-218ENST00000598907 UFSP2Q9NUQ7 469 aa11.39□□□□□ -0.59
SHKBP1-218ENST00000598907 GAR1Q9NY12 217 aaKnown RBP11.39□□□□□ -0.59
SHKBP1-218ENST00000598907 ABRACLQ9P1F3 81 aa11.39□□□□□ -0.59
SHKBP1-218ENST00000598907 PPP1R3CQ9UQK1 317 aa11.39□□□□□ -0.59
SHKBP1-218ENST00000598907 POLDIP2Q9Y2S7 368 aa11.39□□□□□ -0.59
SHKBP1-218ENST00000598907 A0A0U1RQK1 487 aa11.38□□□□□ -0.59
SHKBP1-218ENST00000598907 KIR2DS1A0A191URI9 304 aa11.38□□□□□ -0.59
SHKBP1-218ENST00000598907 A6NLC8 198 aa11.38□□□□□ -0.59
SHKBP1-218ENST00000598907 TMEM14DPA8MWL7 114 aa11.38□□□□□ -0.59
SHKBP1-218ENST00000598907 IFNL4K9M1U5 179 aa11.38□□□□□ -0.59
SHKBP1-218ENST00000598907 BPNT1O95861 308 aa11.38□□□□□ -0.59
SHKBP1-218ENST00000598907 IER3P46695 156 aa11.38□□□□□ -0.59
SHKBP1-218ENST00000598907 NPBWR2P48146 333 aa11.38□□□□□ -0.59
SHKBP1-218ENST00000598907 CAPZA1P52907 286 aa11.38□□□□□ -0.59
SHKBP1-218ENST00000598907 CLDN12P56749 244 aa11.38□□□□□ -0.59
SHKBP1-218ENST00000598907 P2RY14Q15391 338 aa11.38□□□□□ -0.59
SHKBP1-218ENST00000598907 DGUOKQ16854 277 aa11.38□□□□□ -0.59
SHKBP1-218ENST00000598907 CNPY1Q3B7I2 92 aa11.38□□□□□ -0.59
SHKBP1-218ENST00000598907 C2orf76Q3KRA6 126 aa11.38□□□□□ -0.59
SHKBP1-218ENST00000598907 IDNKQ5T6J7 187 aa11.38□□□□□ -0.59
SHKBP1-218ENST00000598907 AWAT2Q6E213 333 aa11.38□□□□□ -0.59
SHKBP1-218ENST00000598907 GCSAMQ8N6F7 178 aa11.38□□□□□ -0.59
SHKBP1-218ENST00000598907 OR51D1Q8NGF3 324 aa11.38□□□□□ -0.59
SHKBP1-218ENST00000598907 SLAMF9Q96A28 289 aa11.38□□□□□ -0.59
SHKBP1-218ENST00000598907 FAM3DQ96BQ1 224 aa11.38□□□□□ -0.59
SHKBP1-218ENST00000598907 METTL9Q9H1A3 318 aa11.38□□□□□ -0.59
SHKBP1-218ENST00000598907 LIN7BQ9HAP6 207 aa11.38□□□□□ -0.59
SHKBP1-218ENST00000598907 SMURF1Q9HCE7 757 aa11.38□□□□□ -0.59
SHKBP1-218ENST00000598907 RNF7Q9UBF6 113 aa11.38□□□□□ -0.59
SHKBP1-218ENST00000598907 ING4Q9UNL4 249 aa11.38□□□□□ -0.59
SHKBP1-218ENST00000598907 SIGLEC9Q9Y336 463 aa11.38□□□□□ -0.59
SHKBP1-218ENST00000598907 A0A075B6Q4 140 aa11.37□□□□□ -0.59
SHKBP1-218ENST00000598907 A0A0B4J203 849 aa11.37□□□□□ -0.59
SHKBP1-218ENST00000598907 F8VVB4 439 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms