RNA–Protein interactions for RNA: ENST00000597968.1

TRIM28-211, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-211ENST00000597968 ODAMA1E959 279 aa10.89□□□□□ -0.67
TRIM28-211ENST00000597968 TOR1AO14656 332 aa10.89□□□□□ -0.67
TRIM28-211ENST00000597968 EI24O14681 340 aa10.89□□□□□ -0.67
TRIM28-211ENST00000597968 CLIC3O95833 236 aa10.89□□□□□ -0.67
TRIM28-211ENST00000597968 ALPLP05186 524 aa10.89□□□□□ -0.67
TRIM28-211ENST00000597968 CD33P20138 364 aa10.89□□□□□ -0.67
TRIM28-211ENST00000597968 CDK2P24941 298 aa10.89□□□□□ -0.67
TRIM28-211ENST00000597968 SLC6A1P30531 599 aa10.89□□□□□ -0.67
TRIM28-211ENST00000597968 KCNJ3P48549 501 aa10.89□□□□□ -0.67
TRIM28-211ENST00000597968 SLC35A2P78381 396 aa10.89□□□□□ -0.67
TRIM28-211ENST00000597968 HLA-DRB5Q30154 266 aa10.89□□□□□ -0.67
TRIM28-211ENST00000597968 SLC16A12Q6ZSM3 486 aa10.89□□□□□ -0.67
TRIM28-211ENST00000597968 SERPINA12Q8IW75 414 aa10.89□□□□□ -0.67
TRIM28-211ENST00000597968 OR5D14Q8NGL3 314 aa10.89□□□□□ -0.67
TRIM28-211ENST00000597968 MRAPQ8TCY5 172 aa10.89□□□□□ -0.67
TRIM28-211ENST00000597968 PHF21AQ96BD5 680 aa10.89□□□□□ -0.67
TRIM28-211ENST00000597968 RCC1LQ96I51 464 aaKnown RBP10.89□□□□□ -0.67
TRIM28-211ENST00000597968 GPR61Q9BZJ8 451 aa10.89□□□□□ -0.67
TRIM28-211ENST00000597968 INPP5EQ9NRR6 644 aa10.89□□□□□ -0.67
TRIM28-211ENST00000597968 IL36RNQ9UBH0 155 aa10.89□□□□□ -0.67
TRIM28-211ENST00000597968 EXOGQ9Y2C4 368 aaKnown RBP10.89□□□□□ -0.67
TRIM28-211ENST00000597968 GSTK1Q9Y2Q3 226 aa10.89□□□□□ -0.67
TRIM28-211ENST00000597968 AMMECR1Q9Y4X0 333 aaPredicted RBP10.89□□□□□ -0.67
TRIM28-211ENST00000597968 MEX3AA1L020 520 aaKnown RBP10.88□□□□□ -0.67
TRIM28-211ENST00000597968 BUB1B-PAK6H3BSN5 160 aa10.88□□□□□ -0.67
TRIM28-211ENST00000597968 MPZL2O60487 215 aa10.88□□□□□ -0.67
TRIM28-211ENST00000597968 FAM106CPP0CH98 169 aa10.88□□□□□ -0.67
TRIM28-211ENST00000597968 PF4V1P10720 104 aa10.88□□□□□ -0.67
TRIM28-211ENST00000597968 ZNF44P15621 663 aa10.88□□□□□ -0.67
TRIM28-211ENST00000597968 DUSP1P28562 367 aa10.88□□□□□ -0.67
TRIM28-211ENST00000597968 MTNR1BP49286 362 aa10.88□□□□□ -0.67
TRIM28-211ENST00000597968 NANOS3P60323 173 aaKnown RBP10.88□□□□□ -0.67
TRIM28-211ENST00000597968 ALKBH1Q13686 389 aaKnown RBP10.88□□□□□ -0.67
TRIM28-211ENST00000597968 ELP2Q6IA86 826 aa10.88□□□□□ -0.67
TRIM28-211ENST00000597968 Q6ZS46 218 aa10.88□□□□□ -0.67
TRIM28-211ENST00000597968 C10orf67Q8IYJ2 551 aa10.88□□□□□ -0.67
TRIM28-211ENST00000597968 PARP16Q8N5Y8 322 aa10.88□□□□□ -0.67
TRIM28-211ENST00000597968 PXT1Q8NFP0 134 aa10.88□□□□□ -0.67
TRIM28-211ENST00000597968 OR10A7Q8NGE5 316 aa10.88□□□□□ -0.67
TRIM28-211ENST00000597968 OR51T1Q8NGJ9 327 aa10.88□□□□□ -0.67
TRIM28-211ENST00000597968 OR13C3Q8NGS6 347 aa10.88□□□□□ -0.67
TRIM28-211ENST00000597968 OR9G1Q8NH87 305 aa10.88□□□□□ -0.67
TRIM28-211ENST00000597968 RNFT2Q96EX2 444 aa10.88□□□□□ -0.67
TRIM28-211ENST00000597968 SLC25A33Q9BSK2 321 aa10.88□□□□□ -0.67
TRIM28-211ENST00000597968 ZCCHC4Q9H5U6 513 aa10.88□□□□□ -0.67
TRIM28-211ENST00000597968 LINC00574Q9H8X3 128 aa10.88□□□□□ -0.67
TRIM28-211ENST00000597968 IGKV1-12A0A0C4DH73 117 aa10.87□□□□□ -0.67
TRIM28-211ENST00000597968 KBTBD11-OT1A0A1B0GTJ5 212 aa10.87□□□□□ -0.67
TRIM28-211ENST00000597968 TMEM212A6NML5 194 aa10.87□□□□□ -0.67
TRIM28-211ENST00000597968 OR4C45A6NMZ5 311 aa10.87□□□□□ -0.67
TRIM28-211ENST00000597968 E9PQ18 207 aa10.87□□□□□ -0.67
TRIM28-211ENST00000597968 LY6LH3BQJ8 138 aa10.87□□□□□ -0.67
TRIM28-211ENST00000597968 SIRPB1O00241 398 aa10.87□□□□□ -0.67
TRIM28-211ENST00000597968 SLC33A1O00400 549 aaPredicted RBP10.87□□□□□ -0.67
TRIM28-211ENST00000597968 SULT1B1O43704 296 aa10.87□□□□□ -0.67
TRIM28-211ENST00000597968 MMP23AO75900 390 aa10.87□□□□□ -0.67
TRIM28-211ENST00000597968 IGKV1D-12P01611 117 aa10.87□□□□□ -0.67
TRIM28-211ENST00000597968 CCDC159P0C7I6 412 aa10.87□□□□□ -0.67
TRIM28-211ENST00000597968 C21orf33P30042 268 aaPredicted RBP10.87□□□□□ -0.67
TRIM28-211ENST00000597968 ALDH3A2P51648 485 aa10.87□□□□□ -0.67
TRIM28-211ENST00000597968 AESQ08117 197 aa10.87□□□□□ -0.67
TRIM28-211ENST00000597968 GALEQ14376 348 aa10.87□□□□□ -0.67
TRIM28-211ENST00000597968 KISS1Q15726 138 aa10.87□□□□□ -0.67
TRIM28-211ENST00000597968 KRBOX4Q5JUW0 171 aa10.87□□□□□ -0.67
TRIM28-211ENST00000597968 TPTE2P1Q5T6R2 138 aa10.87□□□□□ -0.67
TRIM28-211ENST00000597968 Q6P435 159 aa10.87□□□□□ -0.67
TRIM28-211ENST00000597968 CCDC121Q6ZUS5 278 aa10.87□□□□□ -0.67
TRIM28-211ENST00000597968 LYG1Q8N1E2 194 aa10.87□□□□□ -0.67
TRIM28-211ENST00000597968 CBR4Q8N4T8 237 aa10.87□□□□□ -0.67
TRIM28-211ENST00000597968 Q8NFD4 153 aa10.87□□□□□ -0.67
TRIM28-211ENST00000597968 PELI1Q96FA3 418 aa10.87□□□□□ -0.67
TRIM28-211ENST00000597968 Q96MT0 163 aa10.87□□□□□ -0.67
TRIM28-211ENST00000597968 OR5M11Q96RB7 305 aa10.87□□□□□ -0.67
TRIM28-211ENST00000597968 BARHL1Q9BZE3 327 aa10.87□□□□□ -0.67
TRIM28-211ENST00000597968 AURKAIP1Q9NWT8 199 aaPredicted RBP10.87□□□□□ -0.67
TRIM28-211ENST00000597968 TCRBV4S1A1TA0A5B7 111 aa10.86□□□□□ -0.67
TRIM28-211ENST00000597968 FAM90A18PA6NE21 464 aa10.86□□□□□ -0.67
TRIM28-211ENST00000597968 FAM90A16PA6NEW6 464 aa10.86□□□□□ -0.67
TRIM28-211ENST00000597968 FAM90A20PA6NIJ5 464 aa10.86□□□□□ -0.67
TRIM28-211ENST00000597968 FAM90A9PA6NNJ1 464 aa10.86□□□□□ -0.67
TRIM28-211ENST00000597968 FAM90A12PA8MX19 464 aa10.86□□□□□ -0.67
TRIM28-211ENST00000597968 FAM90A5PA8MXJ8 464 aa10.86□□□□□ -0.67
TRIM28-211ENST00000597968 J3QLW9 94 aa10.86□□□□□ -0.67
TRIM28-211ENST00000597968 DEGS1O15121 323 aa10.86□□□□□ -0.67
TRIM28-211ENST00000597968 FADS2O95864 444 aaKnown RBP10.86□□□□□ -0.67
TRIM28-211ENST00000597968 PF4P02776 101 aa10.86□□□□□ -0.67
TRIM28-211ENST00000597968 FAM90A15PP0C7V4 464 aa10.86□□□□□ -0.67
TRIM28-211ENST00000597968 FAM90A13PP0C7W8 464 aa10.86□□□□□ -0.67
TRIM28-211ENST00000597968 FAM90A14PP0C7W9 464 aa10.86□□□□□ -0.67
TRIM28-211ENST00000597968 FAM90A24PP0C7X0 464 aa10.86□□□□□ -0.67
TRIM28-211ENST00000597968 CALCBP10092 127 aa10.86□□□□□ -0.67
TRIM28-211ENST00000597968 ZNF19P17023 458 aa10.86□□□□□ -0.67
TRIM28-211ENST00000597968 GLIPR1P48060 266 aa10.86□□□□□ -0.67
TRIM28-211ENST00000597968 IL13RA2Q14627 380 aa10.86□□□□□ -0.67
TRIM28-211ENST00000597968 ABCA11PQ4W5N1 156 aa10.86□□□□□ -0.67
TRIM28-211ENST00000597968 PRAMEF5Q5TYX0 476 aa10.86□□□□□ -0.67
TRIM28-211ENST00000597968 FOXB2Q5VYV0 432 aa10.86□□□□□ -0.67
TRIM28-211ENST00000597968 ZFP1Q6P2D0 407 aa10.86□□□□□ -0.67
TRIM28-211ENST00000597968 OSR2Q8N2R0 312 aa10.86□□□□□ -0.67
TRIM28-211ENST00000597968 OR13C9Q8NGT0 318 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms